[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 37 items for (author: ma & lx)

EMDB-62756:
3-phenylpropionate bound dioxygenase HcaE-HcaF
Method: single particle / : Jiang WX, Wu M, Cheng XQ, Ma LX, Xing Q

EMDB-63660:
the flagellar filament cap FliD in complex with FliC
Method: single particle / : Xing Q, Cheng XQ, Jiang WX

EMDB-63661:
the flagellar filament cap FliD in complex with FlgL
Method: single particle / : Xing Q, Cheng XQ, Jiang WX

EMDB-63663:
structure of the FliD cap
Method: single particle / : Xing Q, Cheng XQ, Jiang WX

EMDB-47928:
Cryo-EM structure of SARS-CoV-2 spike protein in complex with human neutralizing antibody WRAIR-2008 (focused refinement of NTD and WRAIR-2008)
Method: single particle / : Jensen JL, Thomas PV, Joyce MG

EMDB-48284:
Cryo-EM structure of SARS-CoV-2 spike protein in complex with neutralizing human antibody WRAIR-2008
Method: single particle / : Jensen JL, Thomas PV, Joyce MG

PDB-9ecz:
Cryo-EM structure of SARS-CoV-2 spike protein in complex with human neutralizing antibody WRAIR-2008 (focused refinement of NTD and WRAIR-2008)
Method: single particle / : Jensen JL, Thomas PV, Joyce MG

PDB-9mi3:
Cryo-EM structure of SARS-CoV-2 spike protein in complex with neutralizing human antibody WRAIR-2008
Method: single particle / : Jensen JL, Thomas PV, Joyce MG

EMDB-63662:
structure of FliD-FliC at a 10:10 stoichiometry
Method: single particle / : Chen LX, Chen XQ, Zhang FF, Jiang WX, Xing Q

EMDB-60635:
The CryoEM structure of a C-C bond hydrolase MhpC homotetramer
Method: single particle / : Jiang WX, Cheng XQ, Ma LX, Xing Q

EMDB-60477:
CryoEM structure of a tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
Method: single particle / : Jiang WX, Cheng XQ, Dong X, Ma LX, Xing Q

EMDB-60478:
CryoEM structure of a cellulose CelS in monomeric form
Method: single particle / : Jiang WX, Cheng XQ, Ma LX, Cao Z, Xing Q

EMDB-60475:
CryoEM structure of a GH1 family beta-glucosidase
Method: single particle / : Jiang WX, Cheng XQ, Ma LX, Cao Z, Xing Q

EMDB-60345:
The cryoEM structure of a daminobutyrate--2-oxoglutarate transaminase EctB
Method: single particle / : Jiang WX, Cheng XQ, Ma LX, Xing Q

EMDB-62561:
CryoEM structure of a 2,3-hydroxycinnamic acid 1,2-dioxygenase MhpB in substrate bound form
Method: single particle / : Dong X, Jiang WX, Ma LX, Xing Q

EMDB-38098:
CryoEM structure of the trifunctional NAD biosynthesis/regulator protein NadR in complex with NAD
Method: single particle / : Jiang WX, Dong X, Cheng XQ, Ma LX, Xing Q

EMDB-36831:
ICP1 Csy-dsDNA complex (form 1)
Method: single particle / : Zhang LX, Feng Y

EMDB-36756:
CryoEM structure of the transketolase ANIP from Streptomyces hygrospinosus
Method: single particle / : Jiang WX, Ma LX, Xing Q

EMDB-36757:
CryoEM structure of a 2,3-hydroxycinnamic acid 1,2-dioxygenase MhpB in apo form
Method: single particle / : Jiang WX, Cheng XQ, Ma LX, Xing Q

EMDB-36749:
CryoEM structure of the NADP-dependent malic enzyme MaeB
Method: single particle / : Jiang WX, Cheng XQ, Wu M, Ma LX, Xing Q

EMDB-36758:
CryoEM structure of 3-phenylpropionate/cinnamic acid dioxygenase HcaE-HcaF complex
Method: single particle / : Jiang WX, Cheng XQ, Ma LX, Xing Q

EMDB-36746:
CryoEM structure of the Salmonella effector inositol phosphate phosphatase SopB
Method: single particle / : Jiang WX, Cheng XQ, Wu M, Ma LX

EMDB-35688:
Cas6f of Csy-AcrIF4-dsDNA
Method: single particle / : Feng Y, Zhang LX

EMDB-35689:
Cas8f of Csy-AcrIF4-dsDNA
Method: single particle / : Feng Y, Zhang LX

EMDB-35690:
Overall structure of Csy-AcrIF4-dsDNA
Method: single particle / : Feng Y, Zhang LX

EMDB-36754:
SLC15A4 inhibitor complex
Method: single particle / : Zhang SS, Chen XD, Xie M

EMDB-34849:
Cryo-EM structure of E. coli RNAP sigma32 complex
Method: single particle / : Wu S, Ma LX

EMDB-15205:
cryoEM structure of the catalytically inactive EndoS from S. pyogenes in complex with the Fc region of immunoglobulin G1
Method: single particle / : Trastoy B, Cifuente JO, Du JJ, Sundberg EJ, Guerin ME

EMDB-33837:
Structure of Csy-AcrIF4-dsDNA
Method: single particle / : Feng Y, Zhang LX

EMDB-31968:
Cryo-EM structure of Ultraviolet-B activated UVR8 in complex with COP1
Method: single particle / : Wang YD, Wang LX

EMDB-31058:
The Csy-AcrIF14 complex
Method: single particle / : Zhang LX, Feng Y

EMDB-31059:
The Csy-AcrIF14-dsDNA complex
Method: single particle / : Zhang LX, Feng Y

EMDB-0667:
Cryo-EM structure of the mammalian ATP synthase tetramer bound with inhibitory protein IF1
Method: single particle / : Gu JK, Zhang LX, Yi JB, Yang MJ

EMDB-0668:
Cryo-EM structure of the mammalian E-state ATP synthase FO section
Method: single particle / : Gu JK, Zhang LX, Yi JB, Yang MJ

EMDB-0669:
Cryo-EM structure of the mammalian E-state ATP synthase
Method: single particle / : Gu JK, Zhang LX, Yi JB, Yang MJ

EMDB-0670:
Cryo-EM structure of the mammalian DP-state ATP synthase FO section
Method: single particle / : Gu JK, Zhang LX, Yi JB, Yang MJ

EMDB-0677:
Cryo-EM structure of the mammalian DP-state ATP synthase
Method: single particle / : Gu JK, Zhang LX, Yi JB, Yang MJ

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more