[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 626 items for (author: li & lj)

EMDB-72145:
Nucleotide-free structure of PmtCD in detergent LMNG
Method: single particle / : Worrall LJ, Li FKK, Hu J, Lazarski AC, Strynadka NCJ

EMDB-72169:
Nucleotide-free structure of PmtCD in nanodisc
Method: single particle / : Worrall LJ, Li FKK, Hu J, Lazarski AC, Strynadka NCJ

EMDB-72172:
Nucleotide-free structure of PmtCD in peptidisc
Method: single particle / : Worrall LJ, Li FKK, Hu J, Lazarski AC, Strynadka NCJ

EMDB-72173:
ADP-bound structure of PmtCD in peptidisc
Method: single particle / : Worrall LJ, Li FKK, Hu J, Lazarski AC, Strynadka NCJ

EMDB-71396:
Cryo-EM structure of the PAC1nR-VIP-Gs complex
Method: single particle / : Piper SJ, Lu J, Sexton P, Wootten D

EMDB-71397:
Cryo-EM structure of the PAC1sR-VIP-Gs complex
Method: single particle / : Piper SJ, Lu J, Sexton P, Wootten D

EMDB-71398:
Cryo-EM structure of the PAC1sR-PACAP27-Gs complex
Method: single particle / : Piper SJ, Sexton P, Wootten D

EMDB-52056:
Cryo-EM structure of photosystem II C2S2M2L2 supercomplex from the green alga Chlorella ohadii
Method: single particle / : Kopecny D, Kouril R, Ardhad R, Skalidis I, Kastritis P

EMDB-62140:
Cryo-EM structure of SARS-CoV-2 prototype spike protein in complex with H4 Fab (local refinement)
Method: single particle / : Zhang G, Li LJ, Wu Y, Gao GF

EMDB-48424:
CGRP Receptor in complex with dC2_050
Method: single particle / : Cao J, Cary BP, Belousoff MJ, Wootten DL

PDB-9mni:
CGRP Receptor in complex with dC2_050
Method: single particle / : Cao J, Cary BP, Belousoff MJ, Wootten DL

EMDB-47340:
De novo calcium channel hexamer, CalC6_3 with DHR extensions
Method: single particle / : Weidle C, Liu Y, Borst AJ

EMDB-47356:
De novo calcium channel heptamer, CalC6_3 with DHR extensions. Off target multimerization state
Method: single particle / : Weidle C, Liu Y, Borst AJ

PDB-9dzw:
De novo calcium channel hexamer, CalC6_3 with DHR extensions
Method: single particle / : Weidle C, Liu Y, Borst AJ

PDB-9e0h:
De novo calcium channel heptamer, CalC6_3 with DHR extensions. Off target multimerization state
Method: single particle / : Weidle C, Liu Y, Borst AJ

EMDB-71559:
Cryo-EM structure of CCR6 bound by PF-07054894 and OXM2
Method: single particle / : Wasilko DJ, Wu H

PDB-9pee:
Cryo-EM structure of CCR6 bound by PF-07054894 and OXM2
Method: single particle / : Wasilko DJ, Wu H

EMDB-53223:
The structure of the DNA-binding domain of Nuclear Factor 1 X bound to NFI consensus DNA sequence
Method: helical / : Tiberi M, Nardini M, Chaves-Sanjuan A, Gourlay LJ, Bonnet DMV

EMDB-62581:
Mechanistic insights into the versatile stoichiometry and biased signaling of the apelin receptor-arrestin complex
Method: single particle / : Yue Y, Wu LJ, Xu F

EMDB-62582:
Cryo-EM structure of dimeric APJR and two Beta-arrestins complex with small molecules
Method: single particle / : Yue Y, Wu LJ, Xu F

EMDB-62583:
Cryo-EM structure of dimeric APJR and one Beta-arrestin complex with small molecules
Method: single particle / : Yue Y, Wu LJ, Xu F

EMDB-63958:
Cryo-EM structure of Fusobacterium nucleatum CbpF in complex with human CEACAM5
Method: single particle / : Li LJ, Shen F, Zhao X, Gao GF

EMDB-63959:
Cryo-EM structure of Fusobacterium nucleatum CbpF in complex with human CEACAM1
Method: single particle / : Li LJ, Shen F, Zhao X, Gao GF

EMDB-61152:
Cryo-EM structure of Bat SARS-like coronavirus Khosta-2 spike protein
Method: single particle / : Pan XQ, Li LJ, Liu KF, Qi JX, Gao GF

EMDB-61159:
Cryo-EM structure of Bat SARS-like coronavirus Khosta-2 spike protein in complex with human ACE2 (local refined)
Method: single particle / : Pan XQ, Li LJ, Liu KF, Qi JX, Gao GF

EMDB-61170:
Cryo-EM structure of Bat SARS-like coronavirus Khosta-1 spike protein
Method: single particle / : Pan XQ, Li LJ, Liu KF, Qi JX, Gao GF

EMDB-63105:
Cryo-EM structure of inhibitor E3 bound human urea transporter A2.
Method: single particle / : Huang S, Liu L, Sun J

EMDB-61439:
Cryo-EM structure of GPR65 complexed with miniGs in pH6.5
Method: single particle / : Yue XL, Wu LJ, Hua T, Liu ZJ

EMDB-48672:
Consensus map of the endogenous Pfs230-Pfs48/45 complex
Method: single particle / : Dietrich MH, Glukhova A, Shakeel S, Tham WH

EMDB-62292:
cryo-EM structure of TRIP12 in complex with K29/48 branched-triUb
Method: single particle / : Ai HS, Wu XW, Liu L

EMDB-48669:
Focused map of Pfs230 domains 1-8 of the endogenous Pfs230-Pfs48/45 complex
Method: single particle / : Dietrich MH, Glukhova A, Shakeel S, Tham WH

EMDB-48670:
Focused map of Pfs230 (domains 9-14) and Pfs48/45 of the endogenous Pfs230-Pfs48/45 complex
Method: single particle / : Dietrich MH, Glukhova A, Shakeel S, Tham WH

EMDB-48673:
Composite map of the endogenous complex of Pfs230-Pfs48/45
Method: single particle / : Dietrich MH, Glukhova A, Shakeel S, Tham WH

EMDB-48221:
JUNV GP1, GP2, SSP and CR1-28 Fab complex in a pseudotyped virus membrane
Method: single particle / : Taylor LJ, Sawaya MR, Castells-Graells R, Rodriguez JA

EMDB-48781:
JUNV GP1, GP2, SSP complex with neutralizing antibody in a pseudotyped virus membrane
Method: single particle / : Taylor LJ, Sawaya MR, Castells-Graells R, Rodriguez JA

EMDB-64484:
The full-length human sweet taste receptor TAS1R2 and TAS1R3 in the apo state
Method: single particle / : Shi ZJ, Xu WX, Yue XL, Wu LJ, Hua T, Liu ZJ

EMDB-64485:
The VFT domains of human sweet taste receptor TAS1R2 and TAS1R3 in the apo state
Method: single particle / : Shi ZJ, Xu WX, Yue XL, Wu LJ, Hua T, Liu ZJ

EMDB-64486:
The transmembrane domains of human sweet taste receptor TAS1R2 and TAS1R3 in the apo state
Method: single particle / : Shi ZJ, Xu WX, Yue XL, Wu LJ, Hua T, Liu ZJ

EMDB-64487:
The full-length human sweet taste receptor TAS1R2 and TAS1R3 in the sucralose-bound state
Method: single particle / : Shi ZJ, Xu WX, Yue XL, Wu LJ, Hua T, Liu ZJ

EMDB-64488:
The VFT domains of human sweet taste receptor TAS1R2 and TAS1R3 in the sucralose-bound state
Method: single particle / : Shi ZJ, Xu WX, Yue XL, Wu LJ, Hua T, Liu ZJ

EMDB-52226:
Structure of Zincore (SEPHS1:QRICH1) binding to ZFP91 on DNA
Method: single particle / : Borza R, Perrakis A

EMDB-52227:
Structure of 2x Zincore (SEPHS1:QRICH1) binding to ZFP91 on DNA
Method: single particle / : Borza R, Perrakis A

EMDB-51514:
Interaction with AK2A links AIFM1 to cellular energy metabolism. The cryo-EM structure of dimeric AIFM1 without any binding partner.
Method: single particle / : Rothemann RA, Pavlenko EA, Gerlich S, Grobushkin P, Mostert S, Stobbe D, Racho J, Stillger K, Lapacz K, Petrungaro C, Dengjel J, Neundorf I, Bano D, Mondal M, Weiss K, Ehninger D, Nguyen THD, Poepsel SP, Riemer J

EMDB-51515:
Interaction with AK2A links AIFM1 to cellular energy metabolism. The cryo-EM structure of dimeric AIFM1 engaged to MIA40.
Method: single particle / : Rothemann RA, Pavlenko EA, Gerlich S, Grobushkin P, Mostert S, Stobbe D, Racho J, Stillger K, Lapacz K, Petrungaro C, Dengjel J, Neundorf I, Bano D, Mondal M, Weiss K, Ehninger D, Nguyen THD, Poepsel SP, Riemer J

EMDB-51516:
Interaction with AK2A links AIFM1 to cellular energy metabolism. The cryo-EM structure of dimeric AIFM1 bound by AK2A.
Method: single particle / : Rothemann RA, Pavlenko EA, Gerlich S, Grobushkin P, Mostert S, Stobbe D, Racho J, Stillger K, Lapacz K, Petrungaro C, Dengjel J, Neundorf I, Bano D, Mondal M, Weiss K, Ehninger D, Nguyen THD, Poepsel SP, Riemer J

PDB-9gqy:
Interaction with AK2A links AIFM1 to cellular energy metabolism. The cryo-EM structure of dimeric AIFM1 without any binding partner.
Method: single particle / : Rothemann RA, Pavlenko EA, Gerlich S, Grobushkin P, Mostert S, Stobbe D, Racho J, Stillger K, Lapacz K, Petrungaro C, Dengjel J, Neundorf I, Bano D, Mondal M, Weiss K, Ehninger D, Nguyen THD, Poepsel SP, Riemer J

PDB-9gqz:
Interaction with AK2A links AIFM1 to cellular energy metabolism. The cryo-EM structure of dimeric AIFM1 engaged to MIA40.
Method: single particle / : Rothemann RA, Pavlenko EA, Gerlich S, Grobushkin P, Mostert S, Stobbe D, Racho J, Stillger K, Lapacz K, Petrungaro C, Dengjel J, Neundorf I, Bano D, Mondal M, Weiss K, Ehninger D, Nguyen THD, Poepsel SP, Riemer J

PDB-9gr0:
Interaction with AK2A links AIFM1 to cellular energy metabolism. The cryo-EM structure of dimeric AIFM1 bound by AK2A.
Method: single particle / : Rothemann RA, Pavlenko EA, Gerlich S, Grobushkin P, Mostert S, Stobbe D, Racho J, Stillger K, Lapacz K, Petrungaro C, Dengjel J, Neundorf I, Bano D, Mondal M, Weiss K, Ehninger D, Nguyen THD, Poepsel SP, Riemer J

EMDB-60295:
EcGPR tetramer with catalytic intermediates
Method: single particle / : Zhang T, Leng Q, Liu LJ

EMDB-60352:
EcGK filament complexed with proline.
Method: single particle / : Zhang T, Leng Q, Liu LJ

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more