[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 39 items for (author: kuhle & b)

EMDB-19453:
Human mitochondrial RNase Z complex with ELAC2-D550N catalytic mutant and tRNA-Tyr precursor (Composite model)
Method: single particle / : Bhatta A, Yu RD, Kuhle B, Hillen HS

EMDB-19454:
Consensus map of human mitochondrial RNase Z complex with ELAC2-D550N mutant and tRNA-Gln precursor
Method: single particle / : Bhatta A, Yu RD, Kuhle B, Hillen HS

EMDB-19455:
Human mitochondrial RNase Z complex with ELAC2-D550N catalytic mutant and tRNA-Gln precursor (Composite model)
Method: single particle / : Bhatta A, Yu RD, Kuhle B, Hillen HS

EMDB-19456:
Consensus refinement map of human mitochondrial RNase Z complex with tRNA-Gln precursor
Method: single particle / : Bhatta A, Yu RD, Kuhle B, Hillen HS

EMDB-19457:
Human mitochondrial RNase Z complex with ELAC2-D550N catalytic mutant with ordered flexible arm and tRNA-Tyr precursor - (Composite model)
Method: single particle / : Bhatta A, Yu RD, Kuhle B, Hillen HS

EMDB-19458:
Consensus map of human mitochondrial RNase Z complex with tRNA-Tyr precursor (Class with ordered ELAC2 flexible arm)
Method: single particle / : Bhatta A, Yu RD, Kuhle B, Hillen HS

EMDB-19469:
Human mitochondrial RNase Z complex with tRNA-Tyr precursor - Focused map around ELAC2
Method: single particle / : Bhatta A, Yu RD, Kuhle B, Hillen HS

EMDB-19470:
Human mitochondrial RNase Z complex with tRNA-Gln precursor - Focused map around ELAC2
Method: single particle / : Bhatta A, Yu RD, Kuhle B, Hillen HS

EMDB-19471:
Human mitochondrial RNase Z complex with tRNA-Tyr precursor and ordered ELAC2 flexible arm - ELAC2 focused map
Method: single particle / : Bhatta A, Yu RD, Kuhle B, Hillen HS

PDB-8rr1:
Human mitochondrial RNase Z complex with ELAC2-D550N catalytic mutant and tRNA-Tyr precursor (Composite model)
Method: single particle / : Bhatta A, Yu RD, Kuhle B, Hillen HS

PDB-8rr3:
Human mitochondrial RNase Z complex with ELAC2-D550N catalytic mutant and tRNA-Gln precursor (Composite model)
Method: single particle / : Bhatta A, Yu RD, Kuhle B, Hillen HS

PDB-8rr4:
Human mitochondrial RNase Z complex with ELAC2-D550N catalytic mutant with ordered flexible arm and tRNA-Tyr precursor - (Composite model)
Method: single particle / : Bhatta A, Yu RD, Kuhle B, Hillen HS

EMDB-29070:
Cryo-electron microscopy structure of human mt-SerRS in complex with mt-tRNA(UGA-TL)
Method: single particle / : Hirschi M, Kuhle B, Doerfel L, Schimmel P, Lander G

PDB-8ffy:
Cryo-electron microscopy structure of human mt-SerRS in complex with mt-tRNA(UGA-TL)
Method: single particle / : Hirschi M, Kuhle B, Doerfel L, Schimmel P, Lander G

EMDB-26310:
Cryo-electron microscopy structure of human mt-SerRS in complex with mt-tRNA (GCU)
Method: single particle / : Hirschi M, Kuhle B

EMDB-26311:
Cryo-electron microscopy structure of human mt-SerRS in complex with mt-tRNA(GCU-TL)
Method: single particle / : Hirschi M, Kuhle B

PDB-7u2a:
Cryo-electron microscopy structure of human mt-SerRS in complex with mt-tRNA (GCU)
Method: single particle / : Hirschi M, Kuhle B, Doerfel L, Schimmel P, Lander G

PDB-7u2b:
Cryo-electron microscopy structure of human mt-SerRS in complex with mt-tRNA(GCU-TL)
Method: single particle / : Hirschi M, Kuhle B, Doerfel L, Schimmel P, Lander G

EMDB-10495:
Cryo-EM Structure of NADH reduced form of NAD+-dependent Formate Dehydrogenase from Rhodobacter capsulatus
Method: single particle / : Wendler P, Radon C

EMDB-10496:
Cryo-EM Structure of as isolated form of NAD+-dependent Formate Dehydrogenase from Rhodobacter capsulatus
Method: single particle / : Wendler P, Radon C

EMDB-10093:
Structure of the core of the flagellar export apparatus from Vibrio mimicus, the FliPQR-FlhB complex.
Method: single particle / : Kuhlen L, Johnson S

EMDB-10095:
Structure of the FliPQR complex from the flagellar type 3 secretion system of Pseudomonas savastanoi.
Method: single particle / : Kuhlen L, Johnson S

EMDB-10096:
Structure of the FliPQR complex from the flagellar type 3 secretion system of Vibrio mimicus.
Method: single particle / : Kuhlen L, Johnson S

EMDB-10653:
Structure of the core of the flagellar export apparatus from Vibrio mimicus, the FliPQR-FlhB, in amphipol A8-35
Method: single particle / : Kuhlen L, Johnson S, Deme JC, Lea SM

PDB-6s3l:
Structure of the core of the flagellar export apparatus from Vibrio mimicus, the FliPQR-FlhB complex.
Method: single particle / : Kuhlen L, Johnson S, Deme JC, Lea SM

PDB-6s3r:
Structure of the FliPQR complex from the flagellar type 3 secretion system of Pseudomonas savastanoi.
Method: single particle / : Kuhlen L, Johnson S, Deme JC, Lea SM

PDB-6s3s:
Structure of the FliPQR complex from the flagellar type 3 secretion system of Vibrio mimicus.
Method: single particle / : Kuhlen L, Johnson S, Deme JC, Lea SM

EMDB-4733:
Improved map of the FliPQR complex that forms the core of the Salmonella type III secretion system export apparatus.
Method: single particle / : Johnson S, Kuhlen L, Abrusci P, Lea SM

EMDB-4734:
Structure of the core Shigella flexneri type III secretion system export gate complex SctRST (Spa24/Spa9/Spa29).
Method: single particle / : Johnson S, Kuhlen L

PDB-6r69:
Improved map of the FliPQR complex that forms the core of the Salmonella type III secretion system export apparatus.
Method: single particle / : Johnson S, Kuhlen L, Abrusci P, Lea SM

PDB-6r6b:
Structure of the core Shigella flexneri type III secretion system export gate complex SctRST (Spa24/Spa9/Spa29).
Method: single particle / : Johnson S, Kuhlen L, Deme JC, Abrusci P, Lea SM

EMDB-0149:
PTC3 holotoxin complex from Photorhabdus luminecens in prepore state (TcdA1, TcdB2, TccC3)
Method: single particle / : Gatsogiannis C, Merino F

EMDB-0150:
PTC3 holotoxin complex from Photorhabdus luminiscens - Mutant TcC-D651A
Method: single particle / : Gatsogiannis C, Merino F

PDB-6h6e:
PTC3 holotoxin complex from Photorhabdus luminecens in prepore state (TcdA1, TcdB2, TccC3)
Method: single particle / : Gatsogiannis C, Merino F, Roderer D, Balchin D, Schubert E, Kuhlee A, Hayer-Hartl M, Raunser S

PDB-6h6f:
PTC3 holotoxin complex from Photorhabdus luminiscens - Mutant TcC-D651A
Method: single particle / : Gatsogiannis C, Merino F, Roderer D, Balchin D, Schubert E, Kuhlee A, Hayer-Hartl M, Raunser S

EMDB-4173:
A FliPQR complex forms the core of the Salmonella type III secretion system export apparatus.
Method: single particle / : Johnson S, Kuhlen L

PDB-6f2d:
A FliPQR complex forms the core of the Salmonella type III secretion system export apparatus.
Method: single particle / : Johnson S, Kuhlen L, Abrusci P, Lea SM

EMDB-3712:
Human BBsome core complex with subunits BBS1, BBS4, BBS5, BBS8, BBS9, BBS18
Method: single particle / : Klink BU, Zent E, Juneja P, Kuhlee A, Raunser S, Wittinghofer A

EMDB-2280:
Negative stain EM structure of the HOPS tethering complex (conformation 1)
Method: single particle / : Broecker C, Kuhlee A, Gatsogiannis C, Balderhaar HJ, Hoenscher C, Engelbrecht-Vandre S, Ungermann C, Raunser S

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more