[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 171 items for (author: julien & m)

EMDB-19005:
structure of the GLMP/MFSD1 complex
Method: single particle / : Jungnickel KEJ, Loew C

EMDB-19006:
Lysosomal peptide transporter
Method: single particle / : Jungnickel KEJ, Loew C

PDB-8r8q:
Lysosomal peptide transporter
Method: single particle / : Jungnickel KEJ, Loew C

EMDB-18373:
cryo-EM structure of apo Clostridioides difficile toxin B
Method: single particle / : Kinsolving J, Bous J, Structural Genomics Consortium (SGC)

EMDB-18374:
cryo-EM structure complex of Frizzled-7 and Clostridioides difficile toxin B
Method: single particle / : Kinsolving J, Bous J

PDB-8qen:
cryo-EM structure of apo Clostridioides difficile toxin B
Method: single particle / : Kinsolving J, Bous J, Structural Genomics Consortium (SGC)

PDB-8qeo:
cryo-EM structure complex of Frizzled-7 and Clostridioides difficile toxin B
Method: single particle / : Kinsolving J, Bous J

EMDB-18323:
Chimeric Adenovirus-derived dodecamer
Method: single particle / : Buzas D, Borucu U, Bufton J, Kapadalakere SY, Toelzer C

PDB-8qbx:
Chimeric Adenovirus-derived dodecamer
Method: single particle / : Buzas D, Borucu U, Bufton J, Kapadalakere SY, Toelzer C

EMDB-16512:
MiniCoV-ADDomer, a SARS-CoV-2 epitope presenting viral like particle
Method: single particle / : Bufton JC, Capin J, Boruku U, Garzoni F, Schaffitzel C, Berger I

EMDB-16522:
Structure of ADDoCoV-ADAH11
Method: single particle / : Yadav KNS, Buzas D, Berger-Schaffitzel C, Berger I

PDB-8c9n:
MiniCoV-ADDomer, a SARS-CoV-2 epitope presenting viral like particle
Method: single particle / : Bufton JC, Capin J, Boruku U, Garzoni F, Schaffitzel C, Berger I

EMDB-17819:
XBB 1.0 RBD bound to P4J15 (Local)
Method: single particle / : Duhoo Y, Lau K

EMDB-17849:
XBB 1.0 RBD bound to P4J15 (Global)
Method: single particle / : Duhoo Y, Lau K

EMDB-17850:
SARS-CoV-2 XBB 1.0 closed conformation.
Method: single particle / : Duhoo Y, Lau K

PDB-8pq2:
XBB 1.0 RBD bound to P4J15 (Local)
Method: single particle / : Duhoo Y, Lau K

PDB-8psd:
SARS-CoV-2 XBB 1.0 closed conformation.
Method: single particle / : Duhoo Y, Lau K

EMDB-18148:
a membrane-bound menaquinol:organohalide oxidoreductase complex RDH complex
Method: single particle / : Dongchun N, Ekundayo B, Henning S, Julien M, Holliger C, Cimmino L

PDB-8q4h:
a membrane-bound menaquinol:organohalide oxidoreductase complex RDH complex
Method: single particle / : Dongchun N, Ekundayo B, Henning S, Julien M, Holliger C, Cimmino L

EMDB-14379:
Cryo-EM structure of an intact carboxysome - core layer
Method: single particle / : Mann D, Evans SL, Bergeron JRC

EMDB-15353:
structure of the human beta-cardiac myosin folded-back off state
Method: single particle / : Grinzato A, Kandiah E, Robert-Paganin J, Auguin D, Kikuti C, Nandwani N, Moussaoui D, Pathak D, Ruppel KM, Spudich JA, Houdusse A

EMDB-15354:
IHMof beta-cardiac myosin heads region
Method: single particle / : Grinzato A, Kandiah E, Robert-Paganin J

PDB-8act:
structure of the human beta-cardiac myosin folded-back off state
Method: single particle / : Grinzato A, Kandiah E, Robert-Paganin J, Auguin D, Kikuti C, Nandwani N, Moussaoui D, Pathak D, Ruppel KM, Spudich JA, Houdusse A

EMDB-28067:
CryoEM reconstruction of tri-specific 298-52-80 Multabody (no symmetry applied)
Method: single particle / : Kucharska I, Cui H, Rubinstein JL, Julien JP

EMDB-28068:
CryoEM reconstruction of the tri-specific 298-52-80 Multabody (octahedral symmetry applied)
Method: single particle / : Kucharska I, Cui H, Rubinstein JL, Julien JP

EMDB-14376:
Cryo-EM structure of the Cyanobium sp. PCC 7001 RuBisCO enzyme at 3.8 A resolution with C1 symmetry
Method: single particle / : Evans SL, Mann D, Bergeron JRC

PDB-8cmy:
Structure of the Cyanobium sp. PCC 7001 determined with C1 symmetry
Method: single particle / : Evans SL, Bergeron JRC

EMDB-14377:
Cryo-EM structure of Cyanobium sp. PCC 7001 carboxysome shell
Method: single particle / : Evans SL, Mann D, Bergeron JRC

EMDB-14380:
Cryo-EM structure of the Cyanobium sp. PCC 7001 Carboxysome internal density outer layer
Method: single particle / : Evans SL, Mann D, Bergeron JRC

EMDB-14381:
Cryo-EM structure of the Cyanobium sp. PCC 7001 Carboxysome internal density middle layer
Method: single particle / : Evans SL, Mann D, Bergeron JRC

EMDB-14385:
Cryo-EM structure of an a-carboxysome RuBisCO enzyme at 2.9 A resolution
Method: single particle / : Mann D, Evans SL, Bergeron JRC

PDB-7yyo:
Cryo-EM structure of an a-carboxysome RuBisCO enzyme at 2.9 A resolution
Method: single particle / : Mann D, Evans SL, Bergeron JRC

EMDB-15947:
Direct observation of the open conformational state of formin mDia1 at actin filament barbed end
Method: single particle / : Maufront J, Guichard B, Cao L, Di Cicco A, Jegou A, Romet-Lemonne G, Bertin A

EMDB-15950:
Direct observation of the closed conformational state of formin mDia1 at actin filament barbed end
Method: single particle / : Maufront J, Guichard B, Cao L, Di Cicco A, Jegou A, Romet-Lemonne G, Bertin A

EMDB-15957:
Direct observation of the conformational state of formin mDia1 dimer along the actin filament
Method: single particle / : Maufront J, Guichard B, Cao L, Di Cicco A, Jegou A, Romet-Lemonne G, Bertin A

EMDB-26936:
Complex of Plasmodium falciparum circumsporozoite protein with 850 Fab
Method: single particle / : Kucharska I, Prieto K, Rubinstein JL, Julien JP

PDB-7v05:
Complex of Plasmodium falciparum circumsporozoite protein with 850 Fab
Method: single particle / : Kucharska I, Prieto K, Rubinstein JL, Julien JP

EMDB-14971:
Cryo-EM structure of the indirubin-bound Hsp90-XAP2-AHR complex
Method: single particle / : Gruszczyk J, Savva CG, Lai-Kee-Him J, Bous J, Ancelin A, Kwong HS, Grandvuillemin L, Bourguet W

EMDB-14972:
Cryo-EM structure of the indirubin-bound Hsp90-XAP2-AHR complex (focused map).
Method: single particle / : Gruszczyk J, Savva CG, Lai-Kee-Him J, Bous J, Ancelin A, Kwong HS, Grandvuillemin L, Bourguet W

PDB-7zub:
Cryo-EM structure of the indirubin-bound Hsp90-XAP2-AHR complex
Method: single particle / : Gruszczyk J, Savva CG, Lai-Kee-Him J, Bous J, Ancelin A, Kwong HS, Grandvuillemin L, Bourguet W

EMDB-14398:
Cryo-EM structure of the A. baumannii MlaBDEF complex bound to APPNHP
Method: single particle / : Mann D, Bergeron JRC

EMDB-33506:
RBD in complex with Fab14
Method: single particle / : Lin JQ, Tan YJE, Wu B, Lescar J

PDB-7xxl:
RBD in complex with Fab14
Method: single particle / : Lin JQ, Tan YJE, Wu B, Lescar J

EMDB-14221:
Structure of the AVP-V2R-arrestin2-ScFv30 complex
Method: single particle / : Bous J, Fouillen A, Trapani S, Granier S, Mouillac B, Bron P

EMDB-14223:
Structure of the V2 receptor Cter-arrestin2-ScFv30 complex
Method: single particle / : Bous J, Fouillen A, Trapani S, Granier S, Mouillac B, Bron P

PDB-7r0c:
Structure of the AVP-V2R-arrestin2-ScFv30 complex
Method: single particle / : Bous J, Fouillen A, Trapani S, Granier S, Mouillac B, Bron P

PDB-7r0j:
Structure of the V2 receptor Cter-arrestin2-ScFv30 complex
Method: single particle / : Bous J, Fouillen A, Trapani S, Granier S, Mouillac B, Bron P

EMDB-13485:
Cryo-EM structure of Bestrhodopsin (rhodopsin-rhodopsin-bestrophin) complex
Method: single particle / : Matzov D, Kaczmarczyk I, Shalev-Benami M

PDB-7pl9:
Cryo-EM structure of Bestrhodopsin (rhodopsin-rhodopsin-bestrophin) complex
Method: single particle / : Matzov D, Kaczmarczyk I, Shalev-Benami M

EMDB-13776:
Structure of formaldehyde cross-linked SARS-CoV-2 S glycoprotein
Method: single particle / : Sulbaran G, Effantin G, Schoehn G, Weissenhorn W

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more