[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 83 items for (author: fernandes & s)

EMDB-76875:
CryoEM structure of Papaya Meleira Virus (PMeV) particles purified directly from Carica papaya latex
Method: single particle / : de Oliveira G, Rodrigues S

EMDB-55269:
Focused map of the FmdABCFG(1) unit of the Mvh-Hdr-Fmd complex of M. marburgensis
Method: single particle / : San Segundo-Acosta P, Murphy BJ

EMDB-55270:
Focused map of the MvhB subunit of the Mvh-Hdr-Fmd complex of M. marburgensis
Method: single particle / : San Segundo-Acosta P, Murphy BJ

EMDB-55271:
Focused map of the FmdABCFG(2) unit of the Mvh-Hdr-Fmd complex of M. marburgensis
Method: single particle / : San Segundo-Acosta P, Murphy BJ

EMDB-55272:
Focused map of the FmdF dimer unit of the Mvh-Hdr-Fmd complex of M. marburgensis
Method: single particle / : San Segundo-Acosta P, Murphy BJ

EMDB-55273:
Focused map of the C-terminus of the MvhB subunit of the Mvh-Hdr-Fmd complex of M. marburgensis
Method: single particle / : San Segundo-Acosta P, Murphy BJ

EMDB-55274:
Consensus map of the mobile arm under state 2 substate a of M. marburgensis
Method: single particle / : San Segundo-Acosta P, Murphy BJ

EMDB-55275:
MvhAGD-focused map of the mobile arm under state 2 substate b of M. marburgensis
Method: single particle / : San Segundo-Acosta P, Murphy BJ

EMDB-55276:
HdrA-focused map of the mobile arm under state 2 substate b of M. marburgensis
Method: single particle / : San Segundo-Acosta P, Murphy BJ

EMDB-55277:
HdrBC-focused map of the mobile arm under state 2 substate b of M. marburgensis
Method: single particle / : San Segundo-Acosta P, Murphy BJ

EMDB-55278:
Consensus map of the mobile arm under state 2 substate b of M. marburgensis
Method: single particle / : San Segundo-Acosta P, Murphy BJ

EMDB-55279:
HdrBC-focused map of the mobile arm under state 1 substate a of M. marburgensis
Method: single particle / : San Segundo-Acosta P, Murphy BJ

EMDB-55280:
MvhAGD-focused map of the mobile arm under state 1 substate a of M. marburgensis
Method: single particle / : San Segundo-Acosta P, Murphy BJ

EMDB-55281:
HdrA-focused map of the mobile arm under state 1 substate a of M. marburgensis
Method: single particle / : San Segundo-Acosta P, Murphy BJ

EMDB-55282:
MvhAGD-focused map of the mobile arm under state 1 substate b of M. marburgensis
Method: single particle / : San Segundo-Acosta P, Murphy BJ

EMDB-55283:
HdrA-focused map of the mobile arm under state 1 substate b of M. marburgensis
Method: single particle / : San Segundo-Acosta P, Murphy BJ

EMDB-55284:
Consensus map of the mobile arm under state 1 substate b of M. marburgensis
Method: single particle / : San Segundo-Acosta P, Murphy BJ

EMDB-55285:
HdrBC-focused map of the mobile arm under state 1 substate b of M. marburgensis
Method: single particle / : San Segundo-Acosta P, Murphy BJ

EMDB-55286:
HdrBC-focused map of the mobile arm under state 2 substate a of M. marburgensis
Method: single particle / : San Segundo-Acosta P, Murphy BJ

EMDB-55287:
MvhAGD-focused map of the mobile arm under state 2 substate a of M. marburgensis
Method: single particle / : San Segundo-Acosta P, Murphy BJ

EMDB-55288:
HdrA-focused map of the mobile arm under state 2 substate a of M. marburgensis
Method: single particle / : San Segundo-Acosta P, Murphy BJ

EMDB-55289:
Consensus map of the mobile arm under state 1 substate a of M. marburgensis
Method: single particle / : San Segundo-Acosta P, Murphy BJ

EMDB-55294:
Consensus low resolution map of the flavin-bifurcating CO2-fixing Mvh-Hdr-Fmd supercomplex from Methanothermobacter marburgensis
Method: single particle / : San Segundo-Acosta P, Murphy BJ

EMDB-55295:
Structure of the MvhAGD-HdrABC dimer of M. marburgensis under state 2 substate a (composite structure)
Method: single particle / : San Segundo-Acosta P, Murphy BJ

EMDB-55296:
Structure of the MvhAGD-HdrABC dimer of M. marburgensis under state 2 substate b (composite structure)
Method: single particle / : San Segundo-Acosta P, Murphy BJ

EMDB-55297:
Structure of the MvhAGD-HdrABC dimer of M. marburgensis under state 1 substate a (composite structure)
Method: single particle / : San Segundo-Acosta P, Murphy BJ

EMDB-55298:
Structure of the MvhAGD-HdrABC dimer of M. marburgensis under state 1 substate b (composite structure)
Method: single particle / : San Segundo-Acosta P, Murphy BJ

EMDB-55299:
Structure of the Mvh-Hdr-Fmd complex of Methanothermobacter marburgensis (composite structure)
Method: single particle / : San Segundo-Acosta P, Murphy BJ

EMDB-50536:
Cryo-EM structure of the human KEOPS complex
Method: single particle / : Cirio C, Fernandes CAH, Venien-Bryan C, Collinet B, Van Tilbeurgh H

PDB-9fl9:
Cryo-EM structure of the human KEOPS complex
Method: single particle / : Cirio C, Fernandes CAH, Venien-Bryan C, Collinet B, Van Tilbeurgh H

EMDB-49573:
Cryo-EM structure of a de-novo designed binder NY1-B04 in complex with HLA-A*02:01 and NY-ESO-1-derived peptide SLLMWITQC
Method: single particle / : Gharpure A, Fernandez-Quintero ML, Ward AB

PDB-9nnf:
Cryo-EM structure of a de-novo designed binder NY1-B04 in complex with HLA-A*02:01 and NY-ESO-1-derived peptide SLLMWITQC
Method: single particle / : Gharpure A, Fernandez-Quintero ML, Ward AB

EMDB-50552:
Porcine Retinol-Binding Protein 3 (RBP3)
Method: single particle / : Kaushik V, Gessa L, Kumar N, Pinkas M, Czarnocki-Cieciura M, Palczewski K, Novacek J, Fernandes H

PDB-9frx:
Porcine Retinol-Binding Protein 3 (RBP3)
Method: single particle / : Kaushik V, Gessa L, Kumar N, Pinkas M, Czarnocki-Cieciura M, Palczewski K, Novacek J, Fernandes H

EMDB-18595:
Cryo-EM structure of the human inward-rectifier potassium 2.1 channel (Kir2.1) - R312H mutant
Method: single particle / : Fernandes CAH, Zuniga D, Venien-Bryan C

PDB-8qql:
Cryo-EM structure of the human inward-rectifier potassium 2.1 channel (Kir2.1) - R312H mutant
Method: single particle / : Fernandes CAH, Zuniga D, Venien-Bryan C

EMDB-45614:
T cell receptor complex
Method: single particle / : Gully BS, Rossjohn J

EMDB-45615:
T cell receptor complex
Method: single particle / : Gully BS, Rossjohn J

PDB-9ci8:
T cell receptor complex
Method: single particle / : Gully BS, Rossjohn J

PDB-9cia:
T cell receptor complex
Method: single particle / : Gully BS, Rossjohn J

EMDB-28864:
Human ABCA4 structure in complex with AMP-PNP
Method: single particle / : Scortecci JF, Van Petegem F, Molday RS

PDB-8f5b:
Human ABCA4 structure in complex with AMP-PNP
Method: single particle / : Scortecci JF, Van Petegem F, Molday RS

EMDB-15118:
13pf undecorated microtubule from recombinant human tubulin (alpha1B, beta3) lacking the C-terminal tail
Method: helical / : Ebberink E, Fernandes S, Hatzopoulos GN, Agashe N, Guidotti N, Reichart T, Reymond L, Velluz MC, Schneider FZ, Pourroy C, Janke C, Gonczy P, Aumeier C, Fierz B

EMDB-15119:
13pf undecorated microtubule from recombinant human tubulin (alpha1B, beta3) with spliced unmodified C-terminal tail on alpha1B.
Method: helical / : Ebberink E, Fernandes S, Hatzopoulos GN, Agashe N, Guidotti N, Reichart T, Reymond L, Velluz MC, Schneider FZ, Pourroy C, Janke C, Gonczy P, Aumeier C, Fierz B

EMDB-15120:
13pf undecorated microtubule from recombinant human tubulin (alpha1B, beta3) with spliced C-terminal tail containing 10E branch on alpha1B.
Method: helical / : Ebberink E, Fernandes S, Hatzopoulos GN, Agashe N, Guidotti N, Reichart T, Reymond L, Velluz MC, Schneider FZ, Pourroy C, Janke C, Gonczy P, Aumeier C, Fierz B

EMDB-28666:
Cryo-EM structure of SARS-CoV-2 Main protease C145S in complex with N-terminal peptide
Method: single particle / : Noske GD, Song Y, Fernandes RS, Oliva G, Godoy AS

PDB-8ey2:
Cryo-EM structure of SARS-CoV-2 Main protease C145S in complex with N-terminal peptide
Method: single particle / : Noske GD, Song Y, Fernandes RS, Oliva G, Godoy AS

EMDB-14678:
Cryo-EM structure of the human inward-rectifier potassium 2.1 channel (Kir2.1)
Method: single particle / : Fernandes CAH, Venien-Bryan C, Fagnen C, Zuniga D

PDB-7zdz:
Cryo-EM structure of the human inward-rectifier potassium 2.1 channel (Kir2.1)
Method: single particle / : Fernandes CAH, Venien-Bryan C, Fagnen C, Zuniga D

EMDB-13427:
Structure of a fully assembled T-cell receptor engaging a tumor-associated peptide-MHC I
Method: single particle / : Susac L, Thomas C

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more