[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 201 items for (author: de & lay & n)

EMDB-18416:
Cryo-EM structure of the monocin tail-tube, MttP.
Method: helical / : Nadejda S, Lichtenstein R, Schlussel S, Azulay G, Borovok I, Holdengraber V, Elad N, Wolf SG, Zalk R, Zarivach R, Frank GA, Herskovits AA

PDB-8qhs:
Cryo-EM structure of the monocin tail-tube, MttP.
Method: helical / : Nadejda S, Lichtenstein R, Schlussel S, Azulay G, Borovok I, Holdengraber V, Elad N, Wolf SG, Zalk R, Zarivach R, Frank GA, Herskovits AA

EMDB-19426:
Escherichia coli 50S subunit in complex with the antimicrobial peptide Api137
Method: single particle / : Lauer S, Nikolay R, Spahn C

EMDB-19427:
Escherichia coli 50S subunit in complex with the antimicrobial peptide Api88 - conformation I
Method: single particle / : Lauer S, Nikolay R, Spahn C

EMDB-19428:
Escherichia coli 50S subunit in complex with the antimicrobial peptide Api88 - conformation II
Method: single particle / : Lauer S, Nikolay R, Spahn C

EMDB-19429:
Escherichia coli 50S subunit in complex with the antimicrobial peptide Api88 - conformation III
Method: single particle / : Lauer S, Nikolay R, Spahn C

PDB-8rpy:
Escherichia coli 50S subunit in complex with the antimicrobial peptide Api137
Method: single particle / : Lauer S, Nikolay R, Spahn C

PDB-8rpz:
Escherichia coli 50S subunit in complex with the antimicrobial peptide Api88 - conformation I
Method: single particle / : Lauer S, Nikolay R, Spahn C

PDB-8rq0:
Escherichia coli 50S subunit in complex with the antimicrobial peptide Api88 - conformation II
Method: single particle / : Lauer S, Nikolay R, Spahn C

PDB-8rq2:
Escherichia coli 50S subunit in complex with the antimicrobial peptide Api88 - conformation III
Method: single particle / : Lauer S, Nikolay R, Spahn C

EMDB-16433:
Cryo-EM structure of NADH bound SLA dehydrogenase RlGabD from Rhizobium leguminosarum bv. trifolii SRD1565
Method: single particle / : Sharma M, Meek RW, Armstrong Z, Blaza JN, Alhifthi A, Li J, Goddard-Borger ED, Williams SJ, Davies GJ

PDB-8c54:
Cryo-EM structure of NADH bound SLA dehydrogenase RlGabD from Rhizobium leguminosarum bv. trifolii SRD1565
Method: single particle / : Sharma M, Meek RW, Armstrong Z, Blaza JN, Alhifthi A, Li J, Goddard-Borger ED, Williams SJ, Davies GJ

EMDB-40676:
Human TRP channel TRPV6 in cNW30 nanodiscs inhibited by tetrahydrocannabivarin (THCV)
Method: single particle / : Neuberger A, Yelshanskaya MV, Nadezhdin KD, Sobolevsky AI

PDB-8sp8:
Human TRP channel TRPV6 in cNW30 nanodiscs inhibited by tetrahydrocannabivarin (THCV)
Method: single particle / : Neuberger A, Yelshanskaya MV, Nadezhdin KD, Sobolevsky AI

EMDB-40557:
Cryo-EM structure of designed Influenza HA binder, HA_20, bound to Influenza HA (Strain: Iowa43)
Method: single particle / : Borst AJ, Bennett NR

PDB-8sk7:
Cryo-EM structure of designed Influenza HA binder, HA_20, bound to Influenza HA (Strain: Iowa43)
Method: single particle / : Borst AJ, Bennett NR

EMDB-29343:
Cryo-EM structure of human TRPV6 in complex with the natural phytoestrogen genistein
Method: single particle / : Neuberger A, Yelshanskaya MV, Nadezhdin KD, Sobolevsky AI

EMDB-29344:
Cryo-EM structure of human TRPV6 in the open state
Method: single particle / : Neuberger A, Yelshanskaya MV, Nadezhdin KD, Sobolevsky AI

PDB-8foa:
Cryo-EM structure of human TRPV6 in complex with the natural phytoestrogen genistein
Method: single particle / : Neuberger A, Yelshanskaya MV, Nadezhdin KD, Sobolevsky AI

PDB-8fob:
Cryo-EM structure of human TRPV6 in the open state
Method: single particle / : Neuberger A, Yelshanskaya MV, Nadezhdin KD, Sobolevsky AI

EMDB-15213:
Cryo-EM density map of Tn4430 TnpA hyperactive mutant (TnpA3X) in complex with IR48 substrate.
Method: single particle / : Shkumatov AV, Liu Y, Efremov RG

EMDB-15218:
Medium resolution cryo-EM density map of Tn4430 TnpA transposase from Tn3 family in apo state
Method: single particle / : Shkumatov AV, Liu Y, Efremov RG

EMDB-15520:
Cryo-EM structure of human tankyrase 2 SAM-PARP filament (G1032W mutant)
Method: helical / : Mariotti L, Inian O, Desfosses A, Beuron F, Morris EP, Guettler S

PDB-8aly:
Cryo-EM structure of human tankyrase 2 SAM-PARP filament (G1032W mutant)
Method: helical / : Mariotti L, Inian O, Desfosses A, Beuron F, Morris EP, Guettler S

EMDB-31806:
Telomeric mononucleosome
Method: single particle / : Soman A

EMDB-31810:
Telomeric Dinucleosome
Method: single particle / : Soman A

EMDB-31815:
Telomeric Dinucleosome in open state
Method: single particle / : Soman A

EMDB-31816:
Telomeric trinucleosome
Method: single particle / : Soman A

EMDB-31823:
Telomeric tetranucleosome
Method: single particle / : Soman A

EMDB-31826:
Telomeric trinucleosome in open state
Method: single particle / : Soman A

EMDB-31832:
Telomeric tetranucleosome in open state
Method: single particle / : Soman A

EMDB-31907:
Telomeric Dinucleosome at 4.6 angstroms
Method: single particle / : Soman A

EMDB-31908:
Telomeric Dinucleosome at 5angstroms
Method: single particle / : Soman A

EMDB-31909:
Open dinucleosome at 6.6 angstroms
Method: single particle / : Soman A

PDB-7v90:
Telomeric mononucleosome
Method: single particle / : Soman A

PDB-7v96:
Telomeric Dinucleosome
Method: single particle / : Soman A

PDB-7v9c:
Telomeric Dinucleosome in open state
Method: single particle / : Soman A

PDB-7v9j:
Telomeric trinucleosome
Method: single particle / : Soman A

PDB-7v9k:
Telomeric tetranucleosome
Method: single particle / : Soman A

PDB-7v9s:
Telomeric trinucleosome in open state
Method: single particle / : Soman A

PDB-7va4:
Telomeric tetranucleosome in open state
Method: single particle / : Soman A

EMDB-14626:
Human elongator Elp456 subcomplex
Method: single particle / : Gaik M, Glatt S

EMDB-14627:
Murine Elongator Elp456 subcomplex
Method: single particle / : Gaik M, Glatt S

EMDB-24128:
Cryo-EM structure of broadly neutralizing V2-apex-targeting antibody J033 in complex with HIV-1 Env
Method: single particle / : Zhou T, Gao F

PDB-7n28:
Cryo-EM structure of broadly neutralizing V2-apex-targeting antibody J033 in complex with HIV-1 Env
Method: single particle / : Zhou T, Gao F

EMDB-24071:
Cryo-EM structure of broadly neutralizing V2-apex-targeting antibody J038 in complex with HIV-1 Env
Method: single particle / : Zhou T, Gao F

PDB-7mxd:
Cryo-EM structure of broadly neutralizing V2-apex-targeting antibody J038 in complex with HIV-1 Env
Method: single particle / : Zhou T, Gao F

EMDB-23949:
The insulin receptor ectodomain in complex with a venom hybrid insulin analog - "head" region
Method: single particle / : Blakely AD, Xiong X, Kim JH, Menting J, Schafer IB, Schubert HL, Agrawal R, Gutmann T, Delaine C, Zhang Y, Artik GO, Merriman A, Eckert D, Lawrence MC, Coskun U, Fisher SJ, Forbes BE, Safavi-Hemami H, Hill CP, Chou DHC

EMDB-23950:
The insulin receptor ectodomain in complex with four venom hybrid insulins - symmetric conformation
Method: single particle / : Blakely AD, Xiong X, Kim JH, Menting J, Schafer IB, Schubert HL, Agrawal R, Gutmann T, Delaine C, Zhang Y, Artik GO, Merriman A, Eckert D, Lawrence MC, Coskun U, Fisher SJ, Forbes BE, Safavi-Hemami H, Hill CP, Chou DHC

EMDB-23951:
The insulin receptor ectodomain in complex with three venom hybrid insulin molecules - asymmetric conformation
Method: single particle / : Blakely AD, Xiong X, Kim JH, Menting J, Schafer IB, Schubert HL, Agrawal R, Gutmann T, Delaine C, Zhang Y, Artik GO, Merriman A, Eckert D, Lawrence MC, Coskun U, Fisher SJ, Forbes BE, Safavi-Hemami H, Hill CP, Chou DHC

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more