[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 38 items for (author: bushnell & da)

EMDB-73233:
Tra1 and core modules including core tip of ctSAGA complex
Method: single particle / : Mattoo RUH, Chen DH, Bushnell DA, Tamir S, Kornberg RD

EMDB-73234:
Tra1 and Core Module of ctSAGA
Method: single particle / : Mattoo RUH, Chen DH, Bushnell DA, Tamir S, Kornberg RD

EMDB-73235:
Histone Acetyl Transferase (HAT) module of ctSAGA
Method: single particle / : Mattoo RUH, Chen DH, Bushnell DA, Tamir S, Kornberg RD

EMDB-73236:
Tra1, Core and minimal HAT modules of ctSAGA, composite.
Method: single particle / : Mattoo RUH, Chen DH, Bushnell DA, Tamir S, Kornberg RD

EMDB-73237:
Focused map of HAT module Bromodomain region
Method: single particle / : Mattoo RUH, Chen DH, Bushnell DA, Tamir S, Kornberg RD

EMDB-73238:
Focused map of Tra1 module of ctSAGA
Method: single particle / : Mattoo RUH, Chen DH, Bushnell DA, Tamir S, Kornberg RD

EMDB-73239:
Focused map of Tra1 module of ctSAGA
Method: single particle / : Mattoo RUH, Chen DH, Bushnell DA, Tamir S, Kornberg RD

EMDB-73240:
Focused map of Tra1 module of ctSAGA complex
Method: single particle / : Mattoo RUH, Chen DH, Bushnell DA, Tamir S, Kornberg RD

EMDB-73241:
Focused map of core module of ctSAGA complex
Method: single particle / : Mattoo RUH, Chen DH, Bushnell DA, Tamir S, Kornberg RD

EMDB-73242:
Focused map of core module of ctSAGA complex
Method: single particle / : Mattoo RUH, Chen DH, Bushnell DA, Kornberg RD

EMDB-73243:
Focused map of core module of ctSAGA complex
Method: single particle / : Mattoo RUH, Chen DH, Bushnell DA, Tamir S, Kornberg RD

EMDB-73261:
Tra1 module of ctSAGA
Method: single particle / : Mattoo RUH, Chen DH, Bushnell DA, Tamir S, Kornberg RD

EMDB-73269:
Core module of ctSAGA
Method: single particle / : Mattoo RUH, Chen DH, Bushnell DA, Tamir S, Kornberg RD

PDB-9ynu:
Tra1 and core modules including core tip of ctSAGA complex
Method: single particle / : Mattoo RUH, Chen DH, Bushnell DA, Tamir S, Kornberg RD

PDB-9ynv:
Histone Acetyl Transferase (HAT) module of ctSAGA
Method: single particle / : Mattoo RUH, Chen DH, Bushnell DA, Tamir S, Kornberg RD

PDB-9ynw:
Tra1, Core and minimal HAT modules of ctSAGA, composite.
Method: single particle / : Mattoo RUH, Chen DH, Bushnell DA, Tamir S, Kornberg RD

PDB-9yol:
Tra1 module of ctSAGA
Method: single particle / : Mattoo RUH, Chen DH, Bushnell DA, Tamir S, Kornberg RD

PDB-9yoq:
Core module of ctSAGA
Method: single particle / : Mattoo RUH, Chen DH, Bushnell DA, Tamir S, Kornberg RD

PDB-9yzy:
ctSAGA Focused on HAT Bromodomain region
Method: single particle / : Mattoo RUH, Chen DH, Bushnell DA, Tamir S, Kornberg RD

EMDB-22284:
Head-Middle module of Mediator
Method: single particle / : Zhang HQ, Chen DC

EMDB-22397:
T module
Method: single particle / : Zhang HQ, Chen DC, Bushnell DA, Kornberg RD

PDB-6xp5:
Head-Middle module of Mediator
Method: single particle / : Zhang HQ, Chen DC, Kornberg RD

PDB-7jmn:
Tail module of Mediator complex
Method: single particle / : Zhang HQ, Chen DC

EMDB-22399:
Mediator-Pol II complex
Method: single particle / : Zhang HQ, Chen DC, Bushnell DA, Kornberg RD

EMDB-22519:
The N-terminus of varicella-zoster virus glycoprotein B has a functional role in fusion
Method: single particle / : Oliver SL

EMDB-22520:
The N-terminus of varicella-zoster virus glycoprotein B has a functional role in fusion
Method: single particle / : Oliver SL

EMDB-22629:
The N-terminus of varicella-zoster virus glycoprotein B has a functional role in fusion.
Method: single particle / : Oliver SL

PDB-7k1s:
The N-terminus of varicella-zoster virus glycoprotein B has a functional role in fusion.
Method: single particle / : Oliver SL

EMDB-21247:
A 2.8 Angstrom Cryo-EM Structure of a Glycoprotein B-Neutralizing Antibody Complex Reveals a Critical Domain for Herpesvirus Fusion Initiation
Method: single particle / : Oliver SL

PDB-6vn1:
A 2.8 Angstrom Cryo-EM Structure of a Glycoprotein B-Neutralizing Antibody Complex Reveals a Critical Domain for Herpesvirus Fusion Initiation
Method: single particle / : Oliver SL

PDB-5sva:
Mediator-RNA Polymerase II Pre-Initiation Complex
Method: single particle / : Robinson PJ, Bushnell DA, Kornberg RD

EMDB-8305:
Mediator-RNA Polymerase II Pre-Initiation Complex Delta Mediator Tail (Focused Refinement)
Method: single particle / : Robinson PJ, Bushnell DA, Kornberg RD

EMDB-8307:
Mediator-RNA Polymerase II Pre-Initiation Complex Delta TFIIE-IIH (Focused refinement)
Method: single particle / : Robinson PJ, Bushnell DA, Kornberg RD

EMDB-8308:
Mediator-RNA Polymerase II Pre-Initiation Complex
Method: single particle / : Robinson PJ, Bushnell DA, Kornberg RD

PDB-5fmf:
the P-lobe of RNA polymerase II pre-initiation complex
Method: single particle / : Murakami K, Tsai K, Kalisman N, Bushnell DA, Asturias FJ, Kornberg RD

EMDB-3114:
Structure of an RNA polymerase II pre-initiation complex
Method: single particle / : Murakami K, Tsai KL, Kalisman N, Bushnell DA, Asturias FJ, Kornberg RD

EMDB-3115:
the P-lobe of RNA polymerase II pre-initiation complex
Method: single particle / : Murakami K, Tsai KL, Kalisman N, Bushnell DA, Asturias FJ, Kornberg RD

EMDB-2394:
Architecture of an RNA polymerase II transcription pre-initiation complex
Method: single particle / : Murakami K, Elmlund H, Kalisman N, Bushnell DA, Adams CM, Azubel M, Elmlund D, Levi-Kalisman Y, Liu X, Levitt M, Kornberg RD

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more