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3ZEH
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Solution structure of the Hs. PSIP1 PWWP domain
分子名称: PC4 AND SFRS1-INTERACTING PROTEIN
著者van Ingen, H, van Nuland, R, Timmers, H.T.M, Boelens, R.
登録日2012-12-05
公開日2013-05-22
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Nucleosomal DNA Binding Drives the Recognition of H3K36-Methylated Nucleosomes by the Psip1-Pwwp Domain.
Epigenetics Chromatin, 6, 2013
3F9K
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BU of 3f9k by Molmil
Two domain fragment of HIV-2 integrase in complex with LEDGF IBD
分子名称: Integrase, MAGNESIUM ION, PC4 and SFRS1-interacting protein, ...
著者Hare, S, Cherepanov, P.
登録日2008-11-14
公開日2009-01-20
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献A novel co-crystal structure affords the design of gain-of-function lentiviral integrase mutants in the presence of modified PSIP1/LEDGF/p75
Plos Pathog., 5, 2009
4FU6
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BU of 4fu6 by Molmil
Crystal structure of the PSIP1 PWWP domain
分子名称: GLYCEROL, PC4 and SFRS1-interacting protein, SULFATE ION, ...
著者Qin, S, Tempel, W, Xu, C, Wu, H, Dong, A, Cerovina, T, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2012-06-28
公開日2012-08-29
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure and function of the nucleosome-binding PWWP domain.
Trends Biochem.Sci., 39, 2014
5YI9
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BU of 5yi9 by Molmil
Solution structure of the LEDGF/p75 IBD - JPO2 (aa 56-91) complex
分子名称: PC4 and SFRS1-interacting protein,Cell division cycle-associated 7-like protein
著者Veverka, V.
登録日2017-10-03
公開日2018-08-15
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Affinity switching of the LEDGF/p75 IBD interactome is governed by kinase-dependent phosphorylation.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6EMO
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BU of 6emo by Molmil
Solution structure of the LEDGF/p75 IBD - JPO2 (aa 1-32) complex
分子名称: PC4 and SFRS1-interacting protein,LEDGF/p75 IBD-JPO2 M1
著者Veverka, V.
登録日2017-10-03
公開日2018-07-25
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Affinity switching of the LEDGF/p75 IBD interactome is governed by kinase-dependent phosphorylation.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6EMR
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BU of 6emr by Molmil
Solution structure of the LEDGF/p75 IBD - IWS1 (aa 446-548) complex
分子名称: PC4 and SFRS1-interacting protein,Protein IWS1 homolog
著者Veverka, V.
登録日2017-10-03
公開日2018-07-25
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Affinity switching of the LEDGF/p75 IBD interactome is governed by kinase-dependent phosphorylation.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6EMQ
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BU of 6emq by Molmil
Solution structure of the LEDGF/p75 IBD - MLL1 (aa 111-160) complex
分子名称: PC4 and SFRS1-interacting protein,Histone-lysine N-methyltransferase 2A
著者Veverka, V.
登録日2017-10-03
公開日2018-08-01
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Affinity switching of the LEDGF/p75 IBD interactome is governed by kinase-dependent phosphorylation.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6EMP
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BU of 6emp by Molmil
Solution structure of the LEDGF/p75 IBD - POGZ (aa 1370-1404) complex
分子名称: PC4 and SFRS1-interacting protein,Pogo transposable element with ZNF domain
著者Veverka, V.
登録日2017-10-03
公開日2018-07-25
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Affinity switching of the LEDGF/p75 IBD interactome is governed by kinase-dependent phosphorylation.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5N88
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BU of 5n88 by Molmil
Crystal structure of antibody bound to viral protein
分子名称: PC4 and SFRS1-interacting protein, VH59 antibody
著者Bao, L, Hannon, C, Cruz-Migoni, A, Ptchelkine, D, Sun, M.-y, Derveni, M, Bunjobpol, W, Chambers, J.S, Simmons, A, Phillips, S.E.V, Rabbitts, T.H.
登録日2017-02-23
公開日2017-12-20
最終更新日2019-10-16
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Intracellular immunization against HIV infection with an intracellular antibody that mimics HIV integrase binding to the cellular LEDGF protein.
Sci Rep, 7, 2017
7PEL
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BU of 7pel by Molmil
CryoEM structure of simian T-cell lymphotropic virus intasome in complex with PP2A regulatory subunit B56 gamma
分子名称: DNA (5'-D(*AP*CP*TP*GP*TP*GP*TP*TP*TP*GP*GP*CP*GP*CP*TP*TP*CP*TP*CP*TP*C)-3'), DNA (5'-D(*GP*AP*GP*AP*GP*AP*AP*GP*CP*GP*CP*CP*AP*AP*AP*CP*AP*CP*A)-3'), Isoform 3 of PC4 and SFRS1-interacting protein,Isoform Gamma-2 of Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform, ...
著者Barski, M, Pye, V.E, Nans, A, Cherepanov, P, Maertens, G.N.
登録日2021-08-10
公開日2021-08-25
実験手法ELECTRON MICROSCOPY (3.34 Å)
主引用文献Cryo-EM structure of the deltaretroviral intasome in complex with the PP2A regulatory subunit B56gamma.
Nat Commun, 11, 2020
6ZV0
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BU of 6zv0 by Molmil
TFIIS N-terminal domain (TND) from human LEDGF/p75
分子名称: PC4 and SFRS1-interacting protein
著者Veverka, V.
登録日2020-07-23
公開日2021-12-01
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献A ubiquitous disordered protein interaction module orchestrates transcription elongation.
Science, 374, 2021
6TVM
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BU of 6tvm by Molmil
LEDGF/p75 dimer (residues 345-467)
分子名称: PC4 and SFRS1-interacting protein
著者Lux, V, Veverka, V.
登録日2020-01-10
公開日2020-09-09
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Molecular Mechanism of LEDGF/p75 Dimerization.
Structure, 28, 2020
5OYM
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BU of 5oym by Molmil
HIV Integrase Binding Domain of Lens Epithelium-Derived Growth Factor
分子名称: PC4 and SFRS1-interacting protein
著者Rabbitts, T.H, Phillips, S.E.V, Cruz-Migoni, A, Carr, S.B, Hannon, C.
登録日2017-09-11
公開日2018-03-07
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Cloning, purification and structure determination of the HIV integrase-binding domain of lens epithelium-derived growth factor.
Acta Crystallogr F Struct Biol Commun, 74, 2018
3U88
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BU of 3u88 by Molmil
Crystal structure of human menin in complex with MLL1 and LEDGF
分子名称: (4beta,8alpha,9R)-6'-methoxy-10,11-dihydrocinchonan-9-ol, CHOLIC ACID, GLYOXYLIC ACID, ...
著者Huang, J, Wan, B, Lei, M.
登録日2011-10-16
公開日2012-02-15
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The same pocket in menin binds both MLL and JUND but has opposite effects on transcription.
Nature, 482, 2012
7Z1Z
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BU of 7z1z by Molmil
MVV strand transfer complex (STC) intasome in complex with LEDGF/p75 at 3.5 A resolution
分子名称: DNA (37-MER), DNA (5'-D(*GP*CP*TP*GP*CP*GP*AP*GP*AP*TP*CP*CP*GP*CP*TP*CP*CP*GP*GP*TP*G)-3'), DNA (5'-D(P*TP*TP*GP*AP*TP*TP*AP*GP*GP*GP*TP*G)-3'), ...
著者Pye, V.E, Ballandras-Colas, A, Cherepanov, P.
登録日2022-02-25
公開日2022-05-11
最終更新日2022-12-21
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Multivalent interactions essential for lentiviral integrase function.
Nat Commun, 13, 2022
2MTN
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BU of 2mtn by Molmil
Solution structure of MLL-IBD complex
分子名称: Histone-lysine N-methyltransferase 2A, PC4 and SFRS1-interacting protein fusion
著者Cierpicki, T, Pollock, J, Murai, M.
登録日2014-08-23
公開日2014-12-03
最終更新日2015-04-22
実験手法SOLUTION NMR
主引用文献The same site on the integrase-binding domain of lens epithelium-derived growth factor is a therapeutic target for MLL leukemia and HIV.
Blood, 124, 2014
7OUG
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BU of 7oug by Molmil
STLV-1 intasome:B56 in complex with the strand-transfer inhibitor raltegravir
分子名称: DNA (5'-D(*AP*CP*TP*GP*TP*GP*TP*TP*TP*GP*GP*CP*GP*CP*TP*TP*CP*TP*CP*TP*C)-3'), DNA (5'-D(*GP*AP*GP*AP*GP*AP*AP*GP*CP*GP*CP*CP*AP*AP*AP*CP*AP*CP*A)-3'), Integrase, ...
著者Barski, M.S, Ballandras-Colas, A, Cronin, N.B, Pye, V.E, Cherepanov, P, Maertens, G.N.
登録日2021-06-11
公開日2021-08-18
最終更新日2021-10-06
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural basis for the inhibition of HTLV-1 integration inferred from cryo-EM deltaretroviral intasome structures.
Nat Commun, 12, 2021
8CBN
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BU of 8cbn by Molmil
structure of LEDGF/p75 PWWP domain bound to the H3K36 trimethylated dinucleosome
分子名称: Histone H2A, Histone H2B 1.1, Histone H3, ...
著者Koutna, E, Kouba, T, Novacek, J, Veverka, V.
登録日2023-01-25
公開日2023-12-27
実験手法ELECTRON MICROSCOPY (3.34 Å)
主引用文献Multivalency of nucleosome recognition by LEDGF.
Nucleic Acids Res., 51, 2023
6S01
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BU of 6s01 by Molmil
Structure of LEDGF PWWP domain bound H3K36 methylated nucleosome
分子名称: Histone H2A, Histone H2B 1.1, Histone H3, ...
著者Wang, H, Farnung, L, Dienemann, C, Cramer, P.
登録日2019-06-13
公開日2019-12-18
最終更新日2020-01-22
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structure of H3K36-methylated nucleosome-PWWP complex reveals multivalent cross-gyre binding.
Nat.Struct.Mol.Biol., 27, 2020
8CBQ
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BU of 8cbq by Molmil
structure of LEDGF/p75 PWWP domain bound to the H3K36 trimethylated dinucleosome
分子名称: Histone H2A, Histone H2B 1.1, Histone H3, ...
著者Koutna, E, Kouba, T, Novacek, J, Veverka, V.
登録日2023-01-25
公開日2023-09-06
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Multivalency of nucleosome recognition by LEDGF.
Nucleic Acids Res., 51, 2023
3HPH
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BU of 3hph by Molmil
Closed tetramer of Visna virus integrase (residues 1-219) in complex with LEDGF IBD
分子名称: GLYCEROL, Integrase, PC4 and SFRS1-interacting protein, ...
著者Hare, S, Wang, J, Cherepanov, P.
登録日2009-06-04
公開日2009-07-28
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.64 Å)
主引用文献Structural basis for functional tetramerization of lentiviral integrase
Plos Pathog., 5, 2009
3HPG
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BU of 3hpg by Molmil
Visna virus integrase (residues 1-219) in complex with LEDGF IBD: examples of open integrase dimer-dimer interfaces
分子名称: Integrase, PC4 and SFRS1-interacting protein, ZINC ION
著者Hare, S, Labeja, A, Cherepanov, P.
登録日2009-06-04
公開日2009-07-28
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.28 Å)
主引用文献Structural basis for functional tetramerization of lentiviral integrase
Plos Pathog., 5, 2009
2B4J
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BU of 2b4j by Molmil
Structural basis for the recognition between HIV-1 integrase and LEDGF/p75
分子名称: GLYCEROL, Integrase (IN), PC4 and SFRS1 interacting protein, ...
著者Cherepanov, P, Ambrosio, A.L, Rahman, S, Ellenberger, T, Engelman, A.
登録日2005-09-24
公開日2005-10-25
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Structural basis for the recognition between HIV-1 integrase and transcriptional coactivator p75
Proc.Natl.Acad.Sci.Usa, 102, 2005
6TRJ
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BU of 6trj by Molmil
LEDGF/p75 IBD dimer
分子名称: PC4 and SFRS1-interacting protein
著者Kugler, M, Brynda, J.
登録日2019-12-19
公開日2020-09-09
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Fine-tuning of the LEDGF/p75 interaction network by dimerization
Structure
2M16
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BU of 2m16 by Molmil
P75/LEDGF PWWP Domain
分子名称: PC4 and SFRS1-interacting protein
著者Crowe, B.L, Foster, M.P.
登録日2012-11-18
公開日2013-02-27
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Structural basis for high-affinity binding of LEDGF PWWP to mononucleosomes.
Nucleic Acids Res., 41, 2013

 

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