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8P4C
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Structural insights into human co-transcriptional capping - structure 3
分子名称: DNA (32-MER), DNA (41-MER), DNA-directed RNA polymerase II subunit E, ...
著者Garg, G, Dienemann, C, Farnung, L, Schwarz, J, Linden, A, Urlaub, H, Cramer, P.
登録日2023-05-20
公開日2023-08-16
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structural insights into human co-transcriptional capping.
Mol.Cell, 83, 2023
4MZG
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BU of 4mzg by Molmil
Crystal structure of human Spindlin1 bound to histone H3K4me3 peptide
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, ...
著者Su, X, Ding, X, Li, H.
登録日2013-09-30
公開日2014-03-26
実験手法X-RAY DIFFRACTION (1.698 Å)
主引用文献Molecular basis underlying histone H3 lysine-arginine methylation pattern readout by Spin/Ssty repeats of Spindlin1
Genes Dev., 28, 2014
6P7G
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The co-crystal structure of BRAF(V600E) with PHI1
分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, 3-[(imidazo[1,2-b]pyridazin-3-yl)ethynyl]-4-methyl-N-[4-({[2-(morpholin-4-yl)ethyl]amino}methyl)-3-(trifluoromethyl)phenyl]benzamide, Serine/threonine-protein kinase B-raf
著者Agianian, B, Gavathiotis, E.
登録日2019-06-05
公開日2020-09-23
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Inhibitors of BRAF dimers using an allosteric site.
Nat Commun, 11, 2020
6PI7
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BU of 6pi7 by Molmil
Crystal structure of the TDRD2 extended Tudor domain in complex with an antibody fragment and the PIWIL1 peptide
分子名称: Fab antigen-binding fragment, Piwi-like protein 1, Tudor and KH domain-containing protein, ...
著者Liu, K, Min, J.R, Structural Genomics Consortium (SGC)
登録日2019-06-26
公開日2019-07-24
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Lesson from a Fab-enabled co-crystallization study of TDRD2 and PIWIL1.
Methods, 175, 2020
6P3D
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BU of 6p3d by Molmil
The co-crystal structure of BRAF(V600E) with ponatinib
分子名称: 1,2-ETHANEDIOL, 3-(imidazo[1,2-b]pyridazin-3-ylethynyl)-4-methyl-N-{4-[(4-methylpiperazin-1-yl)methyl]-3-(trifluoromethyl)phenyl}benzam ide, AMMONIUM ION, ...
著者Agianian, B, Gavathiotis, E.
登録日2019-05-23
公開日2020-09-23
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献Inhibitors of BRAF dimers using an allosteric site.
Nat Commun, 11, 2020
4NUF
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BU of 4nuf by Molmil
Crystal Structure of SHP/EID1
分子名称: EID1 peptide, Maltose ABC transporter periplasmic protein, Nuclear receptor subfamily 0 group B member 2 chimeric construct, ...
著者Zhi, X, Zhou, X.E, He, Y, Zechner, C, Suino-Powell, K.M, Kliewer, S.A, Melcher, K, Mangelsdorf, D.J, Xu, H.E.
登録日2013-12-03
公開日2014-01-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural insights into gene repression by the orphan nuclear receptor SHP.
Proc.Natl.Acad.Sci.USA, 111, 2014
6Q0J
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BU of 6q0j by Molmil
Structure of a MAPK pathway complex
分子名称: 14-3-3 protein zeta, 5-[(2-fluoro-4-iodophenyl)amino]-N-(2-hydroxyethoxy)imidazo[1,5-a]pyridine-6-carboxamide, Dual specificity mitogen-activated protein kinase kinase 1, ...
著者Park, E, Rawson, S, Jeon, H, Eck, M.J.
登録日2019-08-01
公開日2019-10-09
最終更新日2020-04-22
実験手法ELECTRON MICROSCOPY (4.9 Å)
主引用文献Architecture of autoinhibited and active BRAF-MEK1-14-3-3 complexes.
Nature, 575, 2019
6PZV
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Crystal Structure of Bovine DNMT1 RFTS domain in complex with H3K9me3 and Ubiquitin
分子名称: CITRATE ANION, DNA (cytosine-5)-methyltransferase 1, Histone H3.3, ...
著者Ren, W, Song, J.
登録日2019-08-01
公開日2020-07-15
最終更新日2020-08-12
実験手法X-RAY DIFFRACTION (3.01 Å)
主引用文献Direct readout of heterochromatic H3K9me3 regulates DNMT1-mediated maintenance DNA methylation.
Proc.Natl.Acad.Sci.USA, 117, 2020
6Q0K
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Structure of a MAPK pathway complex
分子名称: 14-3-3 protein zeta/delta, Serine/threonine-protein kinase B-raf
著者Park, E, Rawson, S, Jeon, H, Eck, M.J.
登録日2019-08-01
公開日2019-10-09
最終更新日2020-04-22
実験手法ELECTRON MICROSCOPY (6.8 Å)
主引用文献Architecture of autoinhibited and active BRAF-MEK1-14-3-3 complexes.
Nature, 575, 2019
8QQG
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Structure of BRAF in Complex With Exarafenib (KIN-2787).
分子名称: (3~{S})-~{N}-[4-methyl-3-[2-morpholin-4-yl-6-[[(2~{R})-1-oxidanylpropan-2-yl]amino]pyridin-4-yl]phenyl]-3-[2,2,2-tris(fluoranyl)ethyl]pyrrolidine-1-carboxamide, CHLORIDE ION, Serine/threonine-protein kinase B-raf
著者Schmitt, A, Costanzi, E, Kania, R, Chen, Y.K.
登録日2023-10-04
公開日2024-01-24
実験手法X-RAY DIFFRACTION (2.979 Å)
主引用文献Structure of BRAF in Complex With Exarafenib (KIN-2787).
To Be Published
4O62
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BU of 4o62 by Molmil
CW-type zinc finger of ZCWPW2 in complex with the amino terminus of histone H3
分子名称: Histone H3.3, UNKNOWN ATOM OR ION, ZINC ION, ...
著者Liu, Y, Tempel, W, Dong, A, Loppnau, P, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2013-12-20
公開日2014-03-26
最終更新日2016-06-08
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Family-wide Characterization of Histone Binding Abilities of Human CW Domain-containing Proteins.
J.Biol.Chem., 291, 2016
6Q0T
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BU of 6q0t by Molmil
Structure of a MAPK pathway complex
分子名称: 14-3-3 protein zeta, 5-[(2-fluoro-4-iodophenyl)amino]-N-(2-hydroxyethoxy)imidazo[1,5-a]pyridine-6-carboxamide, Dual specificity mitogen-activated protein kinase kinase 1, ...
著者Park, E, Rawson, S, Jeon, H, Eck, M.J.
登録日2019-08-02
公開日2019-10-09
最終更新日2020-04-22
実験手法ELECTRON MICROSCOPY (5.7 Å)
主引用文献Architecture of autoinhibited and active BRAF-MEK1-14-3-3 complexes.
Nature, 575, 2019
8SIY
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BU of 8siy by Molmil
Origin Recognition Complex Associated (ORCA) protein bound to H4K20me3-nucleosome
分子名称: Histone H2A, Histone H2B, Histone H3.2, ...
著者Bleichert, F, Ekundayo, B.E.
登録日2023-04-17
公開日2023-08-02
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献A dual role for the chromatin reader ORCA/LRWD1 in targeting the origin recognition complex to chromatin.
Embo J., 42, 2023
6PWV
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BU of 6pwv by Molmil
Cryo-EM structure of MLL1 core complex bound to the nucleosome
分子名称: DNA (147-MER), Histone H2A type 1, Histone H2B 1.1, ...
著者Park, S.H, Ayoub, A, Lee, Y.T, Xu, J, Zhang, W, Zhang, B, Zhang, Y, Cianfrocco, M.A, Su, M, Dou, Y, Cho, U.
登録日2019-07-23
公開日2019-12-18
最終更新日2023-08-16
実験手法ELECTRON MICROSCOPY (6.2 Å)
主引用文献Cryo-EM structure of the human MLL1 core complex bound to the nucleosome.
Nat Commun, 10, 2019
4OUC
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BU of 4ouc by Molmil
Structure of human haspin in complex with histone H3 substrate
分子名称: (2R,3R,4S,5R)-2-(4-AMINO-5-IODO-7H-PYRROLO[2,3-D]PYRIMIDIN-7-YL)-5-(HYDROXYMETHYL)TETRAHYDROFURAN-3,4-DIOL, 1,2-ETHANEDIOL, Histone H3.2, ...
著者Chaikuad, A, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
登録日2014-02-15
公開日2014-04-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Modulation of the chromatin phosphoproteome by the haspin protein kinase.
Mol Cell Proteomics, 13, 2014
8SWI
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BU of 8swi by Molmil
Crystal structure of legAS4 from Legionella pneumophila subsp. pneumophila with histone H3 (1-12)peptide
分子名称: Eukaryotic huntingtin interacting protein B, Histone H3 peptided, S-ADENOSYL-L-HOMOCYSTEINE
著者Xu, C, Chung, I.Y.W, Cygler, M.
登録日2023-05-18
公開日2023-12-27
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The SET and ankyrin domains of the secreted Legionella pneumophila histone methyltransferase work together to modify host chromatin.
Mbio, 14, 2023
8SR6
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BU of 8sr6 by Molmil
Crystal structure of legAS4 from Legionella pneumophila subsp. pneumophila with histone H3 (3-17)peptide
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Eukaryotic huntingtin interacting protein B, ...
著者Xu, C, Chung, I.Y.W, Cygler, M.
登録日2023-05-05
公開日2024-03-13
実験手法X-RAY DIFFRACTION (2.22 Å)
主引用文献Histone methyltransferase activity of the secreted Legionella pneumophila SET-domain effector RomA/LegAS4 depends on its ankyrin domain
To Be Published
6R1U
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BU of 6r1u by Molmil
Structure of LSD2/NPAC-linker/nucleosome core particle complex: Class 2
分子名称: DNA (147-MER), FLAVIN-ADENINE DINUCLEOTIDE, Histone H2A, ...
著者Marabelli, C, Pilotto, S, Chittori, S, Subramaniam, S, Mattevi, A.
登録日2019-03-15
公開日2019-04-24
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (4.36 Å)
主引用文献A Tail-Based Mechanism Drives Nucleosome Demethylation by the LSD2/NPAC Multimeric Complex.
Cell Rep, 27, 2019
6R25
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BU of 6r25 by Molmil
Structure of LSD2/NPAC-linker/nucleosome core particle complex: Class 3
分子名称: DNA (147-MER), FLAVIN-ADENINE DINUCLEOTIDE, H2B, ...
著者Marabelli, C, Pilotto, S, Chittori, S, Subramaniam, S, Mattevi, A.
登録日2019-03-15
公開日2019-04-24
実験手法ELECTRON MICROSCOPY (4.61 Å)
主引用文献A Tail-Based Mechanism Drives Nucleosome Demethylation by the LSD2/NPAC Multimeric Complex.
Cell Rep, 27, 2019
8THU
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BU of 8thu by Molmil
Catalytic and non-catalytic mechanisms of histone H4 lysine 20 methyltransferase SUV420H1
分子名称: DNA (145-MER), DNA (146-MER), Histone H2A.Z, ...
著者Abini-Agbomson, S, Armache, K.-J.
登録日2023-07-18
公開日2023-09-06
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Catalytic and non-catalytic mechanisms of histone H4 lysine 20 methyltransferase SUV420H1.
Mol.Cell, 83, 2023
8T9H
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Catalytic and non-catalytic mechanisms of histone H4 lysine 20 methyltransferase SUV420H1
分子名称: DNA (146-MER), Histone H2A, Histone H2B 1.1, ...
著者Abini-Agbomson, S, Armache, K.-J.
登録日2023-06-24
公開日2023-09-13
実験手法ELECTRON MICROSCOPY (3.37 Å)
主引用文献Catalytic and non-catalytic mechanisms of histone H4 lysine 20 methyltransferase SUV420H1
Molecular Cell, 83, 2023
8T9F
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Catalytic and non-catalytic mechanisms of histone H4 lysine 20 methyltransferase SUV420H1
分子名称: DNA (122-MER), Histone H2A.Z, Histone H2B 1.1, ...
著者Abini-Agbomson, S, Armache, K.-J.
登録日2023-06-23
公開日2023-09-06
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Catalytic and non-catalytic mechanisms of histone H4 lysine 20 methyltransferase SUV420H1.
Mol.Cell, 83, 2023
4PP7
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BU of 4pp7 by Molmil
Highly Potent and Selective 3-N-methylquinazoline-4(3H)-one Based Inhibitors of B-RafV600E Kinase
分子名称: N-{2,4-difluoro-3-[methyl(3-methyl-4-oxo-3,4-dihydroquinazolin-6-yl)amino]phenyl}propane-1-sulfonamide, Serine/threonine-protein kinase B-raf
著者Wenglowsky, S, Ren, L, Grina, J, Hansen, J.D, Laird, E.R, Moreno, D, Dinkel, V, Gloor, S.L, Hastings, G, Rana, S, Rasor, K, Sturgis, H.L, Voegtli, W.C, Vigers, G.P.A, Willis, B, Mathieu, S, Rudolph, J.
登録日2014-02-26
公開日2014-04-09
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Highly potent and selective 3-N-methylquinazoline-4(3H)-one based inhibitors of B-Raf(V600E) kinase.
Bioorg.Med.Chem.Lett., 24, 2014
6QXZ
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BU of 6qxz by Molmil
Solution structure of the ASHH2 CW domain with the N-terminal histone H3 tail mimicking peptide monomethylated on lysine 4
分子名称: ALA-ARG-THR-MLZ-GLN-THR-ALA-ARG-TYR, Histone-lysine N-methyltransferase ASHH2, ZINC ION
著者Dobrovolska, O, Madeleine, N, Teigen, K, Halskau, O, Bril'kov, M.
登録日2019-03-08
公開日2019-12-04
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献The Arabidopsis (ASHH2) CW domain binds monomethylated K4 of the histone H3 tail through conformational selection.
Febs J., 287, 2020
8T4R
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BU of 8t4r by Molmil
RAG2-PHD finger in complex with H3K4tBuNle peptide
分子名称: H3 histone peptide, V(D)J recombination-activating protein 2, ZINC ION
著者Kean, K.M, Travis, C.R, Waters, M.L.
登録日2023-06-09
公開日2024-02-14
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Trimethyllysine Reader Proteins Exhibit Widespread Charge-Agnostic Binding via Different Mechanisms to Cationic and Neutral Ligands.
J.Am.Chem.Soc., 146, 2024

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件を2024-05-15に公開中

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