Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1I9E
DownloadVisualize
BU of 1i9e by Molmil
TCR DOMAIN
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CYTOTOXIC TCELL VALPHA DOMAIN
Authors:Rudolph, M.G, Huang, M, Teyton, L, Wilson, I.A.
Deposit date:2001-03-19
Release date:2001-12-05
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of an isolated V(alpha) domain of the 2C T-cell receptor.
J.Mol.Biol., 314, 2001
1I8I
DownloadVisualize
BU of 1i8i by Molmil
CRYSTAL STRUCTURE OF DSFV MR1 IN COMPLEX WITH THE PEPTIDE ANTIGEN OF THE MUTANT EPIDERMAL GROWTH FACTOR RECEPTOR, EGFRVIII, AT ROOM TEMPERATURE
Descriptor: EPIDERMAL GROWTH FACTOR RECEPTOR ANTIBODY MR1SCFV HEAVY CHAIN, EPIDERMAL GROWTH FACTOR RECEPTOR ANTIBODY MR1SCFV LIGHT CHAIN, EPIDERMAL GROWTH FACTOR RECEPTOR, ...
Authors:Landry, R.C, Klimowicz, A.C, Lavictoire, S.J, Borisova, S, Kottachchi, D.T, Lorimer, I.A, Evans, S.V.
Deposit date:2001-03-14
Release date:2002-03-14
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Antibody recognition of a conformational epitope in a peptide antigen: Fv-peptide complex of an antibody fragment specific for the mutant EGF receptor, EGFRvIII.
J.Mol.Biol., 308, 2001
1J05
DownloadVisualize
BU of 1j05 by Molmil
The crystal structure of anti-carcinoembryonic antigen monoclonal antibody T84.66 Fv fragment
Descriptor: GLYCEROL, PHOSPHATE ION, anti-CEA mAb T84.66, ...
Authors:Kondo, H, Nishimura, Y, Shiroishi, M, Asano, R, Noro, N, Tsumoto, K, Kumagai, I.
Deposit date:2002-11-01
Release date:2003-12-16
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The crystal structure of anti-carcinoembryonic antigen monoclonal antibody T84.66 Fv fragment
To be Published
5EDX
DownloadVisualize
BU of 5edx by Molmil
Crystal structure of swine CD8aa homodimer
Descriptor: CD8 alpha antigen
Authors:Liu, Y.J, Qi, J.X, Zhang, N.Z, Xia, C.
Deposit date:2015-10-22
Release date:2016-09-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.801 Å)
Cite:The structural basis of chicken, swine and bovine CD8 alpha alpha dimers provides insight into the co-evolution with MHC I in endotherm species.
Sci Rep, 6, 2016
5ELI
DownloadVisualize
BU of 5eli by Molmil
Triggering receptor expressed on myeloid cells 2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Triggering receptor expressed on myeloid cells 2
Authors:Brett, T.J, Kober, D.L.
Deposit date:2015-11-04
Release date:2016-12-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.0977 Å)
Cite:Neurodegenerative disease mutations in TREM2 reveal a functional surface and distinct loss-of-function mechanisms.
Elife, 5, 2016
5F7F
DownloadVisualize
BU of 5f7f by Molmil
Human T-cell immunoglobulin and mucin domain protein 4 (hTIM-4)
Descriptor: T-cell immunoglobulin and mucin domain-containing protein 4
Authors:Gao, G.F, Lu, G, Wang, H, Qi, J.
Deposit date:2015-12-08
Release date:2016-02-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.502 Å)
Cite:Crystal structures of human TIM members: Ebolavirus entry-enhancing receptors
Chin.Sci.Bull., 60, 2015
5F1S
DownloadVisualize
BU of 5f1s by Molmil
Crystal structure of the teleost fish polymeric Ig receptor (pIgR) ectodomain
Descriptor: polymeric Immunoglobulin Receptor
Authors:Stadtmueller, B.M, Bjorkman, P.J.
Deposit date:2015-11-30
Release date:2016-03-16
Last modified:2019-12-11
Method:X-RAY DIFFRACTION (1.749 Å)
Cite:The structure and dynamics of secretory component and its interactions with polymeric immunoglobulins.
Elife, 5, 2016
5F71
DownloadVisualize
BU of 5f71 by Molmil
Human T-cell immunoglobulin and mucin domain protein 3 (hTIM-3)
Descriptor: Hepatitis A virus cellular receptor 2, SODIUM ION
Authors:Gao, G.F, Lu, G, Wang, H, Qi, J.
Deposit date:2015-12-07
Release date:2016-02-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.404 Å)
Cite:Crystal structures of human TIM members: Ebolavirus entry-enhancing receptors
Chin.Sci.Bull., 60, 2015
5F70
DownloadVisualize
BU of 5f70 by Molmil
Crystal structures of human TIM members
Descriptor: Hepatitis A virus cellular receptor 1
Authors:Gao, G.F, Lu, G, Wang, H, Qi, J.
Deposit date:2015-12-07
Release date:2016-02-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of human TIM members: Ebolavirus entry-enhancing receptors
Chin.Sci.Bull., 60, 2015
5FEB
DownloadVisualize
BU of 5feb by Molmil
Crystal structure of the Voltage-gated Sodium Channel Beta 2 subunit extracellular domain
Descriptor: GLYCEROL, Sodium channel subunit beta-2
Authors:Das, S, Van Petegem, F.
Deposit date:2015-12-16
Release date:2016-03-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Binary architecture of the Nav1.2-beta 2 signaling complex.
Elife, 5, 2016
5F7H
DownloadVisualize
BU of 5f7h by Molmil
Human T-cell immunoglobulin and mucin domain protein 4 (hTIM-4) complex with phosphoserine
Descriptor: CALCIUM ION, PHOSPHOSERINE, T-cell immunoglobulin and mucin domain-containing protein 4
Authors:Gao, G.F, Lu, G, Wang, H, Qi, J.
Deposit date:2015-12-08
Release date:2016-02-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structures of human TIM members: Ebolavirus entry-enhancing receptors
Chin.Sci.Bull., 60, 2015
5FFL
DownloadVisualize
BU of 5ffl by Molmil
Crystal structure of mouse CD300lf at 1.6 Angstroms resolution.
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CD300 antigen-like family member F, ...
Authors:Nelson, C.A, Fremont, D.H.
Deposit date:2015-12-18
Release date:2016-08-31
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.602 Å)
Cite:Discovery of a proteinaceous cellular receptor for a norovirus.
Science, 353, 2016
5FDY
DownloadVisualize
BU of 5fdy by Molmil
Crystal structure of the Voltage-gated Sodium Channel Beta 2 subunit extracellular domain, C72A/C75A mutant
Descriptor: GLYCEROL, Sodium channel subunit beta-2
Authors:Das, S, Van Petegem, F.
Deposit date:2015-12-16
Release date:2016-03-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Binary architecture of the Nav1.2-beta 2 signaling complex.
Elife, 5, 2016
5GGV
DownloadVisualize
BU of 5ggv by Molmil
CTLA-4 in complex with tremelimumab Fab
Descriptor: Cytotoxic T-lymphocyte protein 4, heavy chain, light chain
Authors:Heo, Y.S.
Deposit date:2016-06-16
Release date:2016-11-09
Last modified:2016-11-16
Method:X-RAY DIFFRACTION (1.998 Å)
Cite:Structural basis of checkpoint blockade by monoclonal antibodies in cancer immunotherapy
Nat Commun, 7, 2016
5GGS
DownloadVisualize
BU of 5ggs by Molmil
PD-1 in complex with pembrolizumab Fab
Descriptor: Programmed cell death protein 1, heavy chain, light chain
Authors:Heo, Y.S.
Deposit date:2016-06-16
Release date:2016-11-09
Last modified:2016-11-16
Method:X-RAY DIFFRACTION (1.997 Å)
Cite:Structural basis of checkpoint blockade by monoclonal antibodies in cancer immunotherapy
Nat Commun, 7, 2016
5GGT
DownloadVisualize
BU of 5ggt by Molmil
PD-L1 in complex with BMS-936559 Fab
Descriptor: IGK@ protein, IgG H chain, Programmed cell death 1 ligand 1
Authors:Heo, Y.S.
Deposit date:2016-06-16
Release date:2016-11-09
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis of checkpoint blockade by monoclonal antibodies in cancer immunotherapy
Nat Commun, 7, 2016
5GGR
DownloadVisualize
BU of 5ggr by Molmil
PD-1 in complex with nivolumab Fab
Descriptor: Programmed cell death protein 1, heavy chain, light chain
Authors:Heo, Y.S.
Deposit date:2016-06-16
Release date:2016-11-09
Last modified:2016-11-16
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structural basis of checkpoint blockade by monoclonal antibodies in cancer immunotherapy
Nat Commun, 7, 2016
5HDO
DownloadVisualize
BU of 5hdo by Molmil
Crystal structure of a nanobody raised against urokinase-type plasminogen activator
Descriptor: Anti-HCV NS3/4A serine protease immoglobulin heavy chain, CHLORIDE ION, SULFATE ION
Authors:Kromann-Hansen, T.
Deposit date:2016-01-05
Release date:2016-06-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:A Camelid-derived Antibody Fragment Targeting the Active Site of a Serine Protease Balances between Inhibitor and Substrate Behavior.
J.Biol.Chem., 291, 2016
5IMO
DownloadVisualize
BU of 5imo by Molmil
Nanobody targeting mouse Vsig4 in Spacegroup P3221
Descriptor: Nanobody, Protein Vsig4
Authors:Wen, Y, Zheng, F.
Deposit date:2016-03-06
Release date:2017-01-11
Last modified:2017-07-05
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural evaluation of a nanobody targeting complement receptor Vsig4 and its cross reactivity
Immunobiology, 222, 2017
5IR3
DownloadVisualize
BU of 5ir3 by Molmil
Crystal structure of the recombinant highest fibrillogenic natural mutant (obtained from patient AR) derived from lambda 6 light chain variable domain
Descriptor: ACETATE ION, Ig lambda chain V-VI region AR
Authors:Hernandez-Santoyo, A, Rodriguez-Romero, A.
Deposit date:2016-03-11
Release date:2017-06-14
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Stabilizing an amyloidogenic lambda 6 light chain variable domain.
FEBS J., 284, 2017
5IMM
DownloadVisualize
BU of 5imm by Molmil
Nanobody targeting mouse Vsig4 in Spacegroup P212121
Descriptor: Nanobody, Protein Vsig4
Authors:Wen, Y, Zheng, F.
Deposit date:2016-03-06
Release date:2017-01-11
Last modified:2017-07-05
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structural evaluation of a nanobody targeting complement receptor Vsig4 and its cross reactivity
Immunobiology, 222, 2017
5J8O
DownloadVisualize
BU of 5j8o by Molmil
Structure of human Programmed cell death 1 ligand 1 (PD-L1) with low molecular mass inhibitor
Descriptor: (2R)-1-({3-bromo-4-[(2-methyl[1,1'-biphenyl]-3-yl)methoxy]phenyl}methyl)piperidine-2-carboxylic acid, Programmed cell death 1 ligand 1
Authors:Zak, K.M, Grudnik, P, Guzik, K, Zieba, B.J, Musielak, B, Doemling, P, Dubin, G, Holak, T.A.
Deposit date:2016-04-08
Release date:2016-04-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for small molecule targeting of the programmed death ligand 1 (PD-L1).
Oncotarget, 7, 2016
5JDS
DownloadVisualize
BU of 5jds by Molmil
Crystal structure of PD-L1 complexed with a nanobody at 1.7 Angstron resolution
Descriptor: CHLORIDE ION, Nanobody, Programmed cell death 1 ligand 1, ...
Authors:Zhou, A, Wei, H.
Deposit date:2016-04-17
Release date:2017-04-12
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis of a novel PD-L1 nanobody for immune checkpoint blockade.
Cell Discov, 3, 2017
5J89
DownloadVisualize
BU of 5j89 by Molmil
Structure of human Programmed cell death 1 ligand 1 (PD-L1) with low molecular mass inhibitor
Descriptor: 1,2-ETHANEDIOL, N-{2-[({2-methoxy-6-[(2-methyl[1,1'-biphenyl]-3-yl)methoxy]pyridin-3-yl}methyl)amino]ethyl}acetamide, Programmed cell death 1 ligand 1
Authors:Zak, K.M, Grudnik, P, Guzik, K, Zieba, B.J, Musielak, B, Doemling, P, Dubin, G, Holak, T.A.
Deposit date:2016-04-07
Release date:2016-04-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for small molecule targeting of the programmed death ligand 1 (PD-L1).
Oncotarget, 7, 2016
2X44
DownloadVisualize
BU of 2x44 by Molmil
Structure of a strand-swapped dimeric form of CTLA-4
Descriptor: CYTOTOXIC T-LYMPHOCYTE PROTEIN 4
Authors:Sonnen, A.F.-P, Yu, C, Evans, E.J, Stuart, D.I, Davis, S.J, Gilbert, R.J.C.
Deposit date:2010-01-28
Release date:2010-04-07
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Domain Metastability: A Molecular Basis for Immunoglobulin Deposition?
J.Mol.Biol., 399, 2010

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon