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5OMF
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BU of 5omf by Molmil
Closed, ternary structure of KOD DNA polymerase
Descriptor: 1,2-ETHANEDIOL, 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, DNA (5'-D(*GP*AP*CP*CP*AP*CP*GP*GP*CP*CP*AP*C)-3'), ...
Authors:Kropp, H.M, Betz, K, Wirth, J, Diederichs, K, Marx, A.
Deposit date:2017-07-31
Release date:2017-12-20
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.092 Å)
Cite:Crystal structures of ternary complexes of archaeal B-family DNA polymerases.
PLoS ONE, 12, 2017
4D0R
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BU of 4d0r by Molmil
Mtb InhA complex with Pyradizinone compound 1
Descriptor: 4-(4-chlorophenoxy)-6-oxo-1-phenyl-1,6-dihydropyridazine-3-carboxamide, ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE [NADH], NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Read, J.A, Gingell, H, Madhavapeddi, P, Lange, S.
Deposit date:2014-04-29
Release date:2015-05-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Pyridazinones: A Novel Scaffold with Excellent Physicochemical Properties and Safety Profile for a Clinically Validated Target of Mycobacterium Tuberculosis
To be Published
1PU8
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BU of 1pu8 by Molmil
Crystal structure of H.pylori 3-methyladenine DNA glycosylase (MagIII) bound to 1,N6-ethenoadenine
Descriptor: 3-METHYLADENINE DNA GLYCOSYLASE, 3H-IMIDAZO[2,1-I]PURINE, BETA-MERCAPTOETHANOL
Authors:Eichman, B.F, O'Rourke, E.J, Radicella, J.P, Ellenberger, T.
Deposit date:2003-06-24
Release date:2003-10-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Crystal structures of 3-methyladenine DNA glycosylase MagIII and the recognition of alkylated bases
Embo J., 22, 2003
4QR6
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BU of 4qr6 by Molmil
Human Aldose Reductase complexed with a ligand with an IDD structure (2-[2-(1,3-benzothiazol-2-ylmethylcarbamoyl)-5-fluoro-phenoxy]acetic acid) at 1.05 A
Descriptor: Aldose reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, {2-[(1,3-benzothiazol-2-ylmethyl)carbamoyl]-5-fluorophenoxy}acetic acid
Authors:Rechlin, C, Heine, A, Klebe, G.
Deposit date:2014-06-30
Release date:2015-08-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Aldose Reductase: How expensive is the opening of the specificity pocket? IDD ligands under investigation
To be Published
3TB2
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BU of 3tb2 by Molmil
1-Cys peroxidoxin from Plasmodium Yoelli
Descriptor: 1,2-ETHANEDIOL, 1-Cys peroxiredoxin, GLYCEROL, ...
Authors:Qiu, W, Artz, J.D, Vedadi, M, Sharma, S, Houston, S, Lew, J, Wasney, G, Amani, M, Xu, X, Bray, J, Sundstrom, M, Arrowsmith, C, Edwards, A, Hui, R, Bochkarev, A, Structural Genomics Consortium (SGC)
Deposit date:2011-08-04
Release date:2011-10-19
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Genome-scale protein expression and structural biology of Plasmodium falciparum and related Apicomplexan organisms.
Mol.Biochem.Parasitol., 151, 2007
3TFN
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BU of 3tfn by Molmil
Crystal structure of dehydrosqualene synthase (crtm) from s. aureus complexed with bph-1183
Descriptor: (1-{2-[4-(diphenylmethyl)piperazin-1-yl]-2-oxoethyl}cyclopentyl)acetic acid, Dehydrosqualene synthase, MAGNESIUM ION
Authors:Lin, F.-Y, Liu, Y.-L, Oldfield, E.
Deposit date:2011-08-16
Release date:2012-04-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Dual dehydrosqualene/squalene synthase inhibitors: leads for innate immune system-based therapeutics.
Chemmedchem, 7, 2012
4J1N
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BU of 4j1n by Molmil
Crystal structures of FabI from F. tularensis in complex with novel inhibitors based on the benzimidazole scaffold
Descriptor: 1-(4-methoxy-3-methylbenzyl)-1,5,6,7-tetrahydroindeno[5,6-d]imidazole, Enoyl-[acyl-carrier-protein] reductase [NADH], GLYCEROL, ...
Authors:Mehboob, S, Boci, T, Brubaker, L, Santarsiero, B.D, Johnson, M.E.
Deposit date:2013-02-01
Release date:2014-07-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structural and biological evaluation of a novel series of benzimidazole inhibitors of Francisella tularensis enoyl-ACP reductase (FabI).
Bioorg.Med.Chem.Lett., 25, 2015
5U3J
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BU of 5u3j by Molmil
Crystal Structure of DH511.1 Fab in Complex with HIV-1 gp41 MPER Peptide
Descriptor: DH511.1 Heavy Chain, DH511.1 Light Chain, gp41 MPER peptide
Authors:Ofek, G, Wu, L, Lougheed, C.S, Williams, L.D, Nicely, N.I, Haynes, B.F.
Deposit date:2016-12-02
Release date:2017-02-15
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.74 Å)
Cite:Potent and broad HIV-neutralizing antibodies in memory B cells and plasma.
Sci Immunol, 2, 2017
2WWC
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BU of 2wwc by Molmil
3D-structure of the modular autolysin LytC from Streptococcus pneumoniae in complex with synthetic peptidoglycan ligand
Descriptor: 1,4-BETA-N-ACETYLMURAMIDASE, CHOLINE ION, GLYCEROL
Authors:Perez-Dorado, I, Sanles, R, Hermoso, J.A, Gonzalez, A, Garcia, A, Garcia, P, Garcia, J.L.
Deposit date:2009-10-22
Release date:2010-04-21
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Insights Into Pneumococcal Fratricide from the Crystal Structures of the Modular Killing Factor Lytc.
Nat.Struct.Mol.Biol., 17, 2010
4IUO
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BU of 4iuo by Molmil
1.8 Angstrom Crystal Structure of the Salmonella enterica 3-Dehydroquinate Dehydratase (aroD) K170M Mutant in Complex with Quinate
Descriptor: (1S,3R,4S,5R)-1,3,4,5-tetrahydroxycyclohexanecarboxylic acid, 3-dehydroquinate dehydratase
Authors:Light, S.H, Minasov, G, Duban, M.-E, Shuvalova, L, Kwon, K, Lavie, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2013-01-21
Release date:2013-01-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of type I dehydroquinate dehydratase in complex with quinate and shikimate suggest a novel mechanism of schiff base formation.
Biochemistry, 53, 2014
5AC1
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BU of 5ac1 by Molmil
Sheep aldehyde dehydrogenase 1A1 with duocarmycin analog inhibitor
Descriptor: 1-[(1S)-1-methyl-5-oxidanyl-1,2-dihydrobenzo[e]indol-3-yl]hexan-1-one, MAGNESIUM ION, RETINAL DEHYDROGENASE 1, ...
Authors:Koch, M.F, Harteis, S, Blank, I.D, Pestel, G, Tietze, L.F, Ochsenfeld, C, Schneider, S, Sieber, S.A.
Deposit date:2015-08-11
Release date:2015-08-26
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Structural, Biochemical, and Computational Studies Reveal the Mechanism of Selective Aldehyde Dehydrogenase 1A1 Inhibition by Cytotoxic Duocarmycin Analogues.
Angew.Chem.Int.Ed.Engl., 54, 2015
3TPN
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BU of 3tpn by Molmil
Crystal structure of M-PMV dUTPASE complexed with dUPNPP, substrate
Descriptor: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
Authors:Nemeth, V, Barabas, O, Vertessy, G.B.
Deposit date:2011-09-08
Release date:2011-10-12
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural Snapshots of Enzyme-Catalysed Phosphate Ester Hydrolysis Directly Visualize In-line Attack and Inversion
To be Published
3PLR
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BU of 3plr by Molmil
Crystal structure of Klebsiella pneumoniae UDP-glucose 6-dehydrogenase complexed with NADH and UDP-glucose
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, UDP-glucose 6-dehydrogenase, URIDINE-5'-MONOPHOSPHATE
Authors:Chen, Y.-Y, Ko, T.-P, Lin, C.-H, Chen, W.-H, Wang, A.H.-J.
Deposit date:2010-11-15
Release date:2011-09-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Conformational change upon product binding to Klebsiella pneumoniae UDP-glucose dehydrogenase: a possible inhibition mechanism for the key enzyme in polymyxin resistance.
J.Struct.Biol., 175, 2011
5EGH
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BU of 5egh by Molmil
Structure of ENPP6, a choline-specific glycerophosphodiester-phosphodiesterase in complex with phosphocholine
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Morita, J, Kano, K, Kato, K, Takita, H, Ishitani, R, Nishimasu, H, Nureki, O, Aoki, J.
Deposit date:2015-10-27
Release date:2016-03-09
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.803 Å)
Cite:Structure and biological function of ENPP6, a choline-specific glycerophosphodiester-phosphodiesterase
Sci Rep, 6, 2016
1KQF
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BU of 1kqf by Molmil
FORMATE DEHYDROGENASE N FROM E. COLI
Descriptor: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, CARDIOLIPIN, FORMATE DEHYDROGENASE, ...
Authors:Jormakka, M, Tornroth, S, Byrne, B, Iwata, S.
Deposit date:2002-01-05
Release date:2002-03-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Molecular basis of proton motive force generation: structure of formate dehydrogenase-N.
Science, 295, 2002
4AJH
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BU of 4ajh by Molmil
rat LDHA in complex with N-(2-methyl-1,3-benzothiazol-6-yl)-3-ureido- propanamide and 2-(4-bromophenoxy)propanedioic acid
Descriptor: 2-(4-BROMANYLPHENOXY)PROPANEDIOIC ACID, GLYCEROL, L-LACTATE DEHYDROGENASE A CHAIN, ...
Authors:Tucker, J.A, Brassington, C, Hassall, G, Watson, M, Ward, R, Tart, J, Davies, G, Greenwood, R, Pearson, S, Debreczeni, J.
Deposit date:2012-02-16
Release date:2012-03-21
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:The Design and Synthesis of Novel Lactate Dehydrogenase a Inhibitors by Fragment-Based Lead Generation
J.Med.Chem., 55, 2012
4A16
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BU of 4a16 by Molmil
Structure of mouse Acetylcholinesterase complex with Huprine derivative
Descriptor: (1-{4-[(7S,11S)-12-AMINO-3-CHLORO-6,7,10,11-TETRAHYDRO-7,11-METHANOCYCLOOCTA[B]QUINOLIN-9-YL]BUTYL}-1H-1,2,3-TRIAZOL-4-YL)METHANOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETYLCHOLINESTERASE, ...
Authors:Carletti, E, Colletier, J.P, Nachon, F, Weik, M, Ronco, C, Jean, L, Renard, P.Y.
Deposit date:2011-09-14
Release date:2012-03-28
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Huprine Derivatives as Sub-Nanomolar Human Acetylcholinesterase Inhibitors: From Rational Design to Validation by X-Ray Crystallography.
Chemmedchem, 7, 2012
2VNJ
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BU of 2vnj by Molmil
X-RAY STRUCTURE OF THE FERREDOXIN-NADP(H) REDUCTASE FROM RHODOBACTER CAPSULATUS IN COMPLEX WITH NADP. FORM I AT 2.13 ANGSTROMS RESOLUTION
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, NADPH:FERREDOXIN REDUCTASE, ...
Authors:Perez-Dorado, I, Hermoso, J.A.
Deposit date:2008-02-05
Release date:2008-11-11
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Coenzyme Binding and Hydride Transfer in Rhodobacter Capsulatus Ferredoxin/Flavodoxin Nadp(H) Oxidoreductase.
Biochim.Biophys.Acta, 1794, 2009
1YPF
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BU of 1ypf by Molmil
Crystal Structure of GuaC (BA5705) from Bacillus anthracis at 1.8 A Resolution
Descriptor: GMP reductase
Authors:Grenha, R, Levdikov, V.M, Blagova, E.V, Fogg, M.J, Brannigan, J.A, Wilkinson, A.J, Wilson, K.S, Structural Proteomics in Europe (SPINE)
Deposit date:2005-01-31
Release date:2006-02-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of GuaC (BA5705) from Bacillus anthracis at 1.8 A Resolution.
To be Published
5OQF
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BU of 5oqf by Molmil
Crystal structure of a single chain trimer composed of the MHC 1 heavy chain H2-Kb WT, beta-2microglobulin, and ovalbumin derived peptide
Descriptor: Beta-2-microglobulin,H-2 class I histocompatibility antigen, K-B alpha chain
Authors:Mikolajek, H, Werner, J.M.
Deposit date:2017-08-11
Release date:2018-04-11
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:The partial dissociation of MHC class I-bound peptides exposes their N terminus to trimming by endoplasmic reticulum aminopeptidase 1.
J. Biol. Chem., 293, 2018
1HT8
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BU of 1ht8 by Molmil
THE 2.7 ANGSTROM RESOLUTION MODEL OF OVINE COX-1 COMPLEXED WITH ALCLOFENAC
Descriptor: (3-CHLORO-4-PROPOXY-PHENYL)-ACETIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, PROSTAGLANDIN H2 SYNTHASE-1, ...
Authors:Selinsky, B.S, Gupta, K, Sharkey, C.T, Loll, P.J.
Deposit date:2000-12-29
Release date:2001-04-11
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Structural analysis of NSAID binding by prostaglandin H2 synthase: time-dependent and time-independent inhibitors elicit identical enzyme conformations.
Biochemistry, 40, 2001
3SR6
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BU of 3sr6 by Molmil
Crystal Structure of Reduced Bovine Xanthine Oxidase in Complex with Arsenite
Descriptor: FE2/S2 (INORGANIC) CLUSTER, FLAVIN-ADENINE DINUCLEOTIDE, PHOSPHONIC ACIDMONO-(2-AMINO-5,6-DIMERCAPTO-4-OXO-3,7,8A,9,10,10A-HEXAHYDRO-4H-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-7-YLMETHYL)ESTER, ...
Authors:Cao, H, Hille, R.
Deposit date:2011-07-07
Release date:2011-07-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:X-ray Crystal Structure of Arsenite-Inhibited Xanthine Oxidase: Mu-Sulfido,Mu-Oxo Double Bridge between Molybdenum and Arsenic in the Active Site.
J.Am.Chem.Soc., 133, 2011
2J6L
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BU of 2j6l by Molmil
Structure of aminoadipate-semialdehyde dehydrogenase
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, ALDEHYDE DEHYDROGENASE FAMILY 7 MEMBER A1, BROMIDE ION, ...
Authors:Bunkoczi, G, Guo, K, Debreczeni, J.E, Smee, C, Arrowsmith, C, Edwards, A, Sundstrom, M, Weigelt, J, von Delft, F, Oppermann, U.
Deposit date:2006-09-29
Release date:2006-10-12
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Aldehyde Dehydrogenase 7A1 (Aldh7A1) is a Novel Enzyme Involved in Cellular Defense Against Hyperosmotic Stress.
J.Biol.Chem., 285, 2010
7DR2
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BU of 7dr2 by Molmil
Structure of GraFix PSI tetramer from Cyanophora paradoxa
Descriptor: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, BETA-CAROTENE, ...
Authors:Kato, K, Nagao, R, Akita, F, Miyazaki, N, Shen, J.R.
Deposit date:2020-12-25
Release date:2022-02-16
Last modified:2025-09-17
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural insights into an evolutionary turning-point of photosystem I from prokaryotes to eukaryotes
Biorxiv, 2022
7DR0
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BU of 7dr0 by Molmil
Structure of Wild-type PSI monomer1 from Cyanophora paradoxa
Descriptor: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, BETA-CAROTENE, ...
Authors:Kato, K, Nagao, R, Akita, F, Miyazaki, N, Shen, J.R.
Deposit date:2020-12-25
Release date:2022-02-16
Last modified:2025-09-17
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural insights into an evolutionary turning-point of photosystem I from prokaryotes to eukaryotes
Biorxiv, 2022

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