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6MKF
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BU of 6mkf by Molmil
Crystal structure of penicillin binding protein 5 (PBP5) from Enterococcus faecium in the imipenem-bound form
Descriptor: (5R)-5-[(1S,2R)-1-formyl-2-hydroxypropyl]-3-[(2-{[(E)-iminomethyl]amino}ethyl)sulfanyl]-4,5-dihydro-1H-pyrrole-2-carbox ylic acid, SULFATE ION, penicillin binding protein 5 (PBP5)
Authors:Moon, T.M, Lee, C, D'Andrea, E.D, Peti, W, Page, R.
Deposit date:2018-09-25
Release date:2018-10-31
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The structures of penicillin-binding protein 4 (PBP4) and PBP5 fromEnterococciprovide structural insights into beta-lactam resistance.
J. Biol. Chem., 293, 2018
5CZ0
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BU of 5cz0 by Molmil
Neisseria meningitidis 3 dexy-D-arabino-heptulosonate 7-phosphate synthase Glu98Ala variant
Descriptor: 1,2-ETHANEDIOL, MANGANESE (II) ION, PHOSPHOENOLPYRUVATE, ...
Authors:Heyes, L.C, Parker, E.J.
Deposit date:2015-07-31
Release date:2016-08-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:NmeDAH7PS E98A variant at 2.5 Angstroms resolution
To Be Published
8C1D
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BU of 8c1d by Molmil
Aurora A kinase in complex with TPX2-inhibitor 9
Descriptor: (1~{R},2~{R})-cyclohexane-1,2-dicarboxylic acid, 4-(4-chlorophenyl)-7-methyl-1~{H}-indole-6-carboxylic acid, ACETATE ION, ...
Authors:Fischer, G, Rocaboy, M, Blaszczyk, B, Moschetti, T, Wang, X, Scott, D.E, Coyne, A.G, Dagostin, C, Rooney, T, Bayly, A, Feng, J, Asteian, A, Alcaide-Lopez, A, Stockwell, S, Skidmore, J, Venkitaraman, A.R, Abell, C, Blundell, T.L, Hyvonen, M.
Deposit date:2022-12-20
Release date:2024-01-10
Last modified:2024-09-25
Method:X-RAY DIFFRACTION (2.115 Å)
Cite:Selective Aurora A-TPX2 Interaction Inhibitors Have In Vivo Efficacy as Targeted Antimitotic Agents.
J.Med.Chem., 67, 2024
7QHG
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BU of 7qhg by Molmil
LIM domain kinase 2 (LIMK2) in complex with TH-470
Descriptor: 1,2-ETHANEDIOL, 2-(2-methylpropanoylamino)-~{N}-[2-[(phenylmethyl)-[4-(phenylsulfamoyl)phenyl]carbonyl-amino]ethyl]-1,3-thiazole-5-carboxamide, LIM domain kinase 2
Authors:Mathea, S, Salah, E, Hanke, T, Knapp, S.
Deposit date:2021-12-12
Release date:2021-12-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Development and Characterization of Type I, Type II, and Type III LIM-Kinase Chemical Probes.
J.Med.Chem., 65, 2022
8BZC
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BU of 8bzc by Molmil
co-soaked stabilizers for ERa - 14-3-3 interaction (884_AZ244)
Descriptor: 14-3-3 protein sigma, 2-(4-chloranylphenoxy)-2-methyl-~{N}-(2-sulfanylethyl)propanamide, 4-[(~{R})-azanyl(oxidanyl)methyl]-7-propan-2-yloxy-1-benzothiophene-2-carboximidamide, ...
Authors:Visser, E.J, Sijbesma, E, Ottmann, C.
Deposit date:2022-12-14
Release date:2023-12-27
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Linked-fragment stabilizers of 14-3-3 protein-protein interactions
To Be Published
7UQ1
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BU of 7uq1 by Molmil
The X-ray crystal structure of the N-terminal domain of Staphylococcus aureus Fatty Acid Kinase A (FakA, residues 1-208) in complex with AMP and a single Mg ion at the dinuclear binding site
Descriptor: ADENOSINE MONOPHOSPHATE, Fatty Acid Kinase A, GLYCEROL, ...
Authors:Cuypers, M.G, Subramanian, C, Seetharaman, J, Rock, C.O, White, S.W.
Deposit date:2022-04-18
Release date:2022-05-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Domain architecture and catalysis of the Staphylococcus aureus fatty acid kinase.
J.Biol.Chem., 298, 2022
5W5K
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BU of 5w5k by Molmil
Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 in complex with KV70
Descriptor: 10-{[4-(hydroxycarbamoyl)phenyl]methyl}-5lambda~4~-pyrido[3,2-b][1,4]benzothiazin-10-ium, Histone deacetylase 6, POTASSIUM ION, ...
Authors:Porter, N.J, Christianson, D.W.
Deposit date:2017-06-15
Release date:2018-06-27
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Synthesis and Biological Investigation of Phenothiazine-Based Benzhydroxamic Acids as Selective Histone Deacetylase 6 Inhibitors.
J.Med.Chem., 62, 2019
8C1H
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BU of 8c1h by Molmil
Aurora A kinase in complex with TPX2-inhibitor 8
Descriptor: (1~{R},2~{R})-cyclohexane-1,2-dicarboxylic acid, 4-(4-chloranyl-3-pyrazin-2-yloxy-phenyl)-~{N}-(dimethylsulfamoyl)-7-methyl-1~{H}-indole-6-carboxamide, ACETATE ION, ...
Authors:Fischer, G, Rocaboy, M, Blaszczyk, B, Moschetti, T, Wang, X, Scott, D.E, Coyne, A.G, Dagostin, C, Rooney, T, Bayly, A, Feng, J, Asteian, A, Alcaide-Lopez, A, Stockwell, S, Skidmore, J, Venkitaraman, A.R, Abell, C, Blundell, T.L, Hyvonen, M.
Deposit date:2022-12-20
Release date:2024-01-10
Last modified:2024-09-25
Method:X-RAY DIFFRACTION (2.233 Å)
Cite:Selective Aurora A-TPX2 Interaction Inhibitors Have In Vivo Efficacy as Targeted Antimitotic Agents.
J.Med.Chem., 67, 2024
8C3G
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BU of 8c3g by Molmil
Crystal structure of DYRK1A in complex with AZ191
Descriptor: 1,2-ETHANEDIOL, Dual specificity tyrosine-phosphorylation-regulated kinase 1A, N-[2-methoxy-4-(4-methylpiperazin-1-yl)phenyl]-4-(1-methylpyrrolo[2,3-c]pyridin-3-yl)pyrimidin-2-amine, ...
Authors:Grygier, P, Pustelny, K, Dubin, G, Czarna, A.
Deposit date:2022-12-23
Release date:2024-01-10
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Structural perspective on the design of selective DYRK1B inhibitors
To Be Published
6MIG
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BU of 6mig by Molmil
Crystal structure of host-guest complex with PB hachimoji DNA
Descriptor: DNA (5'-D(*CP*TP*TP*AP*TP*(1WA)P*(1WA)P*(DS))-3'), DNA (5'-D(P*(DB)P*(1W5)P*(1W5)P*AP*TP*AP*AP*G)-3'), Gag-Pol polyprotein
Authors:Georgiadis, M.M.
Deposit date:2018-09-19
Release date:2019-02-27
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Hachimoji DNA and RNA: A genetic system with eight building blocks.
Science, 363, 2019
8BZL
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BU of 8bzl by Molmil
Human 20S Proteasome in complex with peptide activator peptide BLM42
Descriptor: ARG-SER-TYR-TYR-SER, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Henneberg, F, Chari, A, Jankowska, E, Witkowska, J.
Deposit date:2022-12-15
Release date:2023-12-27
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Peptidic, Blm10-based activators of human 20S proteasome in vitro and in cellulo enhance degradation of proteins connected with neurodegeneration.
To Be Published
7UWT
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BU of 7uwt by Molmil
Structure of Oxygen-Insensitive NAD(P)H-dependent Nitroreductase NfsB_Vv F70A/F108Y (NTR 2.0) in complex with FMN at 1.85 Angstroms resolution
Descriptor: ACETATE ION, Dihydropteridine reductase, FLAVIN MONONUCLEOTIDE, ...
Authors:Sharrock, A.V, Arcus, V, Mumm, J.S, Ackerley, D.F.
Deposit date:2022-05-03
Release date:2022-05-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The Crystal Structure of Engineered Nitroreductase NTR 2.0 and Impact of F70A and F108Y Substitutions on Substrate Specificity.
Int J Mol Sci, 24, 2023
8OK1
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BU of 8ok1 by Molmil
WD repeat containing protein 5 (WDR5)- N225A mutant
Descriptor: Glutathione S-transferase class-mu 26 kDa isozyme,WD repeat-containing protein 5
Authors:Wolf, E, Boergel, A.
Deposit date:2023-03-26
Release date:2024-04-03
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:A structural competition involving WDR5 times circadian oscillations
To Be Published
7USZ
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BU of 7usz by Molmil
Human DDAH-1, holo (Zn-bound) form
Descriptor: CHLORIDE ION, N(G),N(G)-dimethylarginine dimethylaminohydrolase 1, ZINC ION
Authors:Smith, C.A, Ghebre, Y.T.
Deposit date:2022-04-26
Release date:2022-05-11
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Esomeprazole covalently interacts with the cardiovascular enzyme dimethylarginine dimethylaminohydrolase: Insights into the cardiovascular risk of proton pump inhibitors.
Biochim Biophys Acta Gen Subj, 1866, 2022
5KM2
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BU of 5km2 by Molmil
Human Histidine Triad Nucleotide Binding Protein 1 (hHint1) CMP catalytic product complex
Descriptor: CHLORIDE ION, CYTIDINE-5'-MONOPHOSPHATE, GLYCEROL, ...
Authors:Maize, K.M, Finzel, B.C.
Deposit date:2016-06-26
Release date:2017-06-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:A Crystal Structure Based Guide to the Design of Human Histidine Triad Nucleotide Binding Protein 1 (hHint1) Activated ProTides.
Mol. Pharm., 14, 2017
8C42
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BU of 8c42 by Molmil
Ternary structure of 14-3-3sigma, PKA-responsive ERa phosphopeptide and Fusicoccin-A
Descriptor: 14-3-3 protein sigma, De-acetylated Fusicoccin, Estrogen receptor, ...
Authors:Somsen, B.A, Ottmann, C.
Deposit date:2022-12-30
Release date:2023-12-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Molecular basis and dual ligand regulation of tetrameric estrogen receptor alpha /14-3-3 zeta protein complex.
J.Biol.Chem., 299, 2023
8OIM
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BU of 8oim by Molmil
Crystal structure of the lipase SpL from Sphingomonas sp. HXN-200
Descriptor: Lipase
Authors:Mokos, D, Gruber, K, Daniel, B.
Deposit date:2023-03-23
Release date:2024-04-03
Method:X-RAY DIFFRACTION (1.994 Å)
Cite:Amide formation of (hetero)aromatic esters and primary amines in buffer catalyzed by serine hydrolases: An Asp next to Ser of the catalytic triad of serine hydrolases is crucial for activity
To Be Published
6MJC
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BU of 6mjc by Molmil
Structure of Candida glabrata Csm1:Dsn1(43-67DD) complex
Descriptor: Kinetochore-associated protein DSN1, Monopolin complex subunit CSM1
Authors:Singh, N, Corbett, K.D.
Deposit date:2018-09-20
Release date:2018-11-07
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:The molecular basis of monopolin recruitment to the kinetochore.
Chromosoma, 128, 2019
6MMO
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BU of 6mmo by Molmil
Carbon regulatory PII-like protein SbtB from Cyanobium sp. 7001 bound to AMP
Descriptor: ADENOSINE MONOPHOSPHATE, CHLORIDE ION, Carbon regulatory PII-like protein SbtB, ...
Authors:Kaczmarski, J.A, Jackson, C.
Deposit date:2018-10-01
Release date:2019-09-18
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Structure and function of SbtB from Cyanobium sp. 7001
Biorxiv, 2019
8C3Z
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BU of 8c3z by Molmil
14-3-3sigma bound to strep-tagged PKA-responsive ERa phosphopeptide
Descriptor: 14-3-3 protein sigma, Estrogen receptor, MAGNESIUM ION
Authors:Somsen, B.A, Ottmann, C.
Deposit date:2022-12-30
Release date:2023-12-27
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Molecular basis and dual ligand regulation of tetrameric estrogen receptor alpha /14-3-3 zeta protein complex.
J.Biol.Chem., 299, 2023
8C11
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BU of 8c11 by Molmil
BRD4 in complex with 2-(2-(4-(3,5-dimethylisoxazol-4-yl)-1H-pyrazol-1-yl)acetamido)-N-ethylpropanamide
Descriptor: (2~{S})-2-[2-[4-(3,5-dimethyl-1,2-oxazol-4-yl)pyrazol-1-yl]ethanoylamino]-~{N}-ethyl-propanamide, Bromodomain-containing protein 4
Authors:Martin, M.P, Noble, M.E.N.
Deposit date:2022-12-19
Release date:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:BRD4 complex with compound 22
To Be Published
5D1V
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BU of 5d1v by Molmil
Crystal Structure and Thermal Stability of Hemoglobin from Thermophilic Phototrophic Bacterium Chloroflexus aurantiacus
Descriptor: Globin, PROTOPORPHYRIN IX CONTAINING FE
Authors:Fromme, R, Holl, M, Tang, J.K.
Deposit date:2015-08-04
Release date:2016-08-10
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Crystal Structure and Thermal Stability of Hemoglobin from Thermophilic Phototrophic Bacterium Chloroflexus aurantiacus
To Be Published
7ULI
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BU of 7uli by Molmil
Apo HMG-CoA Reductase from Arabidopsis thaliana (HMG1)
Descriptor: 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1
Authors:Haywood, J, Bond, C.S.
Deposit date:2022-04-05
Release date:2022-05-18
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A fungal tolerance trait and selective inhibitors proffer HMG-CoA reductase as a herbicide mode-of-action.
Nat Commun, 13, 2022
7Q6T
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BU of 7q6t by Molmil
Crystal structure of the bromodomain of ATAD2 with AZ13824374
Descriptor: (1R,9S,12R)-13-[[8-[[1-(2-fluoranyl-2-methyl-propyl)piperidin-4-yl]amino]-3-methyl-[1,2,4]triazolo[4,3-b]pyridazin-6-yl]carbonyl]-12-propan-2-yl-11,13-diazatricyclo[7.3.1.0^{2,7}]trideca-2,4,6-trien-10-one, ATPase family AAA domain-containing protein 2, SULFATE ION
Authors:Patel, S.J, Winter-Holt, J.J.
Deposit date:2021-11-09
Release date:2022-01-19
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Discovery of a Potent and Selective ATAD2 Bromodomain Inhibitor with Antiproliferative Activity in Breast Cancer Models.
J.Med.Chem., 65, 2022
5VDS
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BU of 5vds by Molmil
Human cyclic GMP-AMP synthase (cGAS) in complex with 3',3'-cdUMP
Descriptor: 3',3'-cdUMP, Cyclic GMP-AMP synthase, ZINC ION
Authors:Byrnes, L.J, Hall, J.D.
Deposit date:2017-04-03
Release date:2017-09-27
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.766 Å)
Cite:The catalytic mechanism of cyclic GMP-AMP synthase (cGAS) and implications for innate immunity and inhibition.
Protein Sci., 26, 2017

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PDB entries from 2024-10-02

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