Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8AKI
DownloadVisualize
BU of 8aki by Molmil
Acyl-enzyme complex of ampicillin bound to deacylation mutant KPC-2 (E166Q)
Descriptor: (2R,4S)-2-[(1R)-1-{[(2R)-2-amino-2-phenylacetyl]amino}-2-oxoethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid, Carbapenem-hydrolyzing beta-lactamase KPC, GLYCEROL, ...
Authors:Tooke, C.L, Hinchliffe, P, Spencer, J.
Deposit date:2022-07-29
Release date:2023-03-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Tautomer-Specific Deacylation and Omega-Loop Flexibility Explain the Carbapenem-Hydrolyzing Broad-Spectrum Activity of the KPC-2 beta-Lactamase.
J.Am.Chem.Soc., 145, 2023
8AKH
DownloadVisualize
BU of 8akh by Molmil
Crystal structure of DltE from L. plantarum soaked with LTA
Descriptor: Beta-lactamase family protein, GLYCEROL, L(+)-TARTARIC ACID, ...
Authors:Ravaud, S, Nikolopoulos, N, Grangeasse, C.
Deposit date:2022-07-29
Release date:2023-04-26
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure-function analysis of Lactiplantibacillus plantarum DltE& reveals D-alanylated lipoteichoic acids as direct cues supporting Drosophila juvenile growth.
Elife, 12, 2023
8AJI
DownloadVisualize
BU of 8aji by Molmil
Crystal structure of DltE from L. plantarum, TCEP form
Descriptor: 3,3',3''-phosphanetriyltripropanoic acid, Beta-lactamase family protein, GLYCEROL, ...
Authors:Ravaud, S, Nikolopoulos, N, Grangeasse, C.
Deposit date:2022-07-28
Release date:2023-04-26
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Structure-function analysis of Lactiplantibacillus plantarum DltE& reveals D-alanylated lipoteichoic acids as direct cues supporting Drosophila juvenile growth.
Elife, 12, 2023
8AIK
DownloadVisualize
BU of 8aik by Molmil
Crystal structure of DltE from L. plantarum, tartare bound form
Descriptor: Beta-lactamase family protein, L(+)-TARTARIC ACID
Authors:Ravaud, S, Nikolopoulos, N, Grangeasse, C.
Deposit date:2022-07-26
Release date:2023-04-26
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure-function analysis of Lactiplantibacillus plantarum DltE& reveals D-alanylated lipoteichoic acids as direct cues supporting Drosophila juvenile growth.
Elife, 12, 2023
8AGR
DownloadVisualize
BU of 8agr by Molmil
Crystal structure of DltE from L. plantarum, apo form
Descriptor: 1,2-ETHANEDIOL, Beta-lactamase family protein, SULFATE ION
Authors:Ravaud, S, Nikolopoulos, N, Grangeasse, C.
Deposit date:2022-07-20
Release date:2023-04-26
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Structure-function analysis of Lactiplantibacillus plantarum DltE& reveals D-alanylated lipoteichoic acids as direct cues supporting Drosophila juvenile growth.
Elife, 12, 2023
8AF8
DownloadVisualize
BU of 8af8 by Molmil
Room temperature SSX crystal structure of CTX-M-14 (5K dataset)
Descriptor: Beta-lactamase, SULFATE ION
Authors:Oberthuer, D, Perbandt, M, Prester, A, Rohde, H, Betzel, C, Yefanov, O.
Deposit date:2022-07-15
Release date:2022-11-16
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Rapid and efficient room-temperature serial synchrotron crystallography using the CFEL TapeDrive.
Iucrj, 9, 2022
8AF7
DownloadVisualize
BU of 8af7 by Molmil
Room temperature SSX crystal structure of CTX-M-14 (10K dataset)
Descriptor: Beta-lactamase, SULFATE ION
Authors:Oberthuer, D, Perbandt, M, Prester, A, Rohde, H, Betzel, C, Yefanov, O.
Deposit date:2022-07-15
Release date:2022-11-16
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Rapid and efficient room-temperature serial synchrotron crystallography using the CFEL TapeDrive.
Iucrj, 9, 2022
7ZPV
DownloadVisualize
BU of 7zpv by Molmil
Room temperature SSX crystal structure of CTX-M-14
Descriptor: Beta-lactamase, SULFATE ION
Authors:Oberthuer, D, Perbandt, M, Prester, A, Rohde, H, Betzel, C, Yefanov, O.
Deposit date:2022-04-29
Release date:2022-11-16
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Rapid and efficient room-temperature serial synchrotron crystallography using the CFEL TapeDrive.
Iucrj, 9, 2022
7Y3Z
DownloadVisualize
BU of 7y3z by Molmil
Structure of a novel carboxylesterase FEH from Acinetobacter sp. DL-2
Descriptor: Fenoxaprop-p-ethyl hydrolase
Authors:Huang, Y, Liu, W.D, Zhang, Y.J, Duan, Y.J, Lu, M.L.
Deposit date:2022-06-13
Release date:2023-07-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of a novel carboxylesterase FEH from Acinetobacter sp. DL-2
To Be Published
7VQN
DownloadVisualize
BU of 7vqn by Molmil
Crystal structure of KPC-2 beta-lactamase complexed with hydrolyzed EXW-1
Descriptor: (2R,3S)-3-methyl-4-methylidene-2-[(2S,3R)-3-oxidanyl-1-oxidanylidene-butan-2-yl]-2,3-dihydropyrrole-5-carboxylic acid, Carbapenem-hydrolyzing beta-lactamase KPC, SULFATE ION
Authors:Xie, H.X.
Deposit date:2021-10-20
Release date:2022-10-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Crystal structure of KPC-2 beta-lactamase complexed with hydrolyzed EXW-1
To Be Published
7V21
DownloadVisualize
BU of 7v21 by Molmil
human Serine beta-lactamase-like protein LACTB truncation variant
Descriptor: Serine beta-lactamase-like protein LACTB, mitochondrial
Authors:Zhang, M.H, Yang, M.J.
Deposit date:2021-08-07
Release date:2022-02-16
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.08 Å)
Cite:Structural basis for the catalytic activity of filamentous human serine beta-lactamase-like protein LACTB.
Structure, 30, 2022
7V1Z
DownloadVisualize
BU of 7v1z by Molmil
human Serine beta-lactamase-like protein LACTB
Descriptor: Serine beta-lactamase-like protein LACTB, mitochondrial
Authors:Zhang, M.H, Yang, M.J.
Deposit date:2021-08-07
Release date:2022-02-16
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.98 Å)
Cite:Structural basis for the catalytic activity of filamentous human serine beta-lactamase-like protein LACTB.
Structure, 30, 2022
7V1Y
DownloadVisualize
BU of 7v1y by Molmil
Serine beta-lactamase-like protein LACTB in complex with inhibitor
Descriptor: ALA-ALA-B3S, Serine beta-lactamase-like protein LACTB, mitochondrial
Authors:Zhang, M.H, Yang, M.J.
Deposit date:2021-08-07
Release date:2022-02-16
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (2.82 Å)
Cite:Structural basis for the catalytic activity of filamentous human serine beta-lactamase-like protein LACTB.
Structure, 30, 2022
7UTB
DownloadVisualize
BU of 7utb by Molmil
KPC-2 CARBAPENEMASE IN COMPLEX WITH THE BORONIC ACID INHIBITOR MB_076
Descriptor: Carbapenem-hydrolyzing beta-lactamase KPC, [(1~{R})-1-[2-[(5-azanyl-1,3,4-thiadiazol-2-yl)sulfanyl]ethanoylamino]-2-(4-carboxy-1,2,3-triazol-1-yl)ethyl]-$l^{3}-oxidanyl-bis(oxidanyl)boron
Authors:van den Akker, F, Alsenani, T.A.
Deposit date:2022-04-26
Release date:2022-12-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:Boronic Acid Transition State Inhibitors as Potent Inactivators of KPC and CTX-M beta-Lactamases: Biochemical and Structural Analyses.
Antimicrob.Agents Chemother., 67, 2023
7UON
DownloadVisualize
BU of 7uon by Molmil
CTX-M-14 Y105W mutant
Descriptor: Beta-lactamase, PHOSPHATE ION
Authors:Judge, A, Hu, L, Sankaran, B, Van Riper, J, Prasad, B.V.V, Palzkill, T.
Deposit date:2022-04-13
Release date:2023-01-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Mapping the determinants of catalysis and substrate specificity of the antibiotic resistance enzyme CTX-M beta-lactamase.
Commun Biol, 6, 2023
7ULW
DownloadVisualize
BU of 7ulw by Molmil
CryoEM structure of human LACTB filament
Descriptor: Serine beta-lactamase-like protein LACTB, mitochondrial
Authors:Bennett, J.A, Steward, L.R, Aydin, H.
Deposit date:2022-04-05
Release date:2022-12-07
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:The structure of the human LACTB filament reveals the mechanisms of assembly and membrane binding.
Plos Biol., 20, 2022
7UL6
DownloadVisualize
BU of 7ul6 by Molmil
CryoEM structure of full-length dimeric ClbP
Descriptor: Beta-lactamase
Authors:Velilla, J.A, Walsh Jr, R.M, Gaudet, R.
Deposit date:2022-04-04
Release date:2022-09-28
Last modified:2023-02-15
Method:ELECTRON MICROSCOPY (3.73 Å)
Cite:Structural basis of colibactin activation by the ClbP peptidase.
Nat.Chem.Biol., 19, 2023
7UDA
DownloadVisualize
BU of 7uda by Molmil
Structure of the EstG
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Beta-lactamase domain-containing protein, SODIUM ION
Authors:Chen, Z, Gabelli, S.B.
Deposit date:2022-03-18
Release date:2023-01-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:EstG is a novel esterase required for cell envelope integrity in Caulobacter.
Curr.Biol., 33, 2023
7UA7
DownloadVisualize
BU of 7ua7 by Molmil
Crystal structure of indoline 9 with KPC-2
Descriptor: Carbapenem-hydrolyzing beta-lactamase KPC, GLYCEROL, tert-butyl {(3R)-3-[(1H-tetrazol-5-yl)carbamoyl]-1-[3-(trifluoromethyl)benzoyl]-2,3-dihydro-1H-indol-3-yl}carbamate
Authors:Akhtar, A, Chen, Y.
Deposit date:2022-03-11
Release date:2023-03-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.247 Å)
Cite:Probing the binding hot spots of KPC-2 carbapenemase using reversible tetrazole-based inhibitors
To Be Published
7U9B
DownloadVisualize
BU of 7u9b by Molmil
Crystal structure of indoline 7 with KPC-2
Descriptor: Carbapenem-hydrolyzing beta-lactamase KPC, [(3S)-3-(1H-tetrazol-5-yl)-2,3-dihydro-1H-indol-1-yl][3-(trifluoromethyl)phenyl]methanone
Authors:Akhtar, A, Chen, Y.
Deposit date:2022-03-10
Release date:2023-03-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Probing the binding hot spots of KPC-2 carbapenemase using reversible tetrazole-based inhibitors
To Be Published
7U8S
DownloadVisualize
BU of 7u8s by Molmil
Crystal Structure of KPC-2 with compound 2
Descriptor: 3-fluoro-N-[(1R,3S)-3-(1H-tetrazol-5-yl)-2,3-dihydro-1H-inden-1-yl]benzamide, Carbapenem-hydrolyzing beta-lactamase KPC
Authors:Akhtar, A, Chen, Y.
Deposit date:2022-03-09
Release date:2023-03-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Probing the binding hot spots of KPC-2 carbapenemase using reversible tetrazole-based inhibitors
To Be Published
7U70
DownloadVisualize
BU of 7u70 by Molmil
Crystal Structure of CTX-M-14 with compound 2
Descriptor: 3-fluoro-N-[(1R,3S)-3-(1H-tetrazol-5-yl)-2,3-dihydro-1H-inden-1-yl]benzamide, Beta-lactamase
Authors:Akhtar, A, Chen, Y.
Deposit date:2022-03-07
Release date:2023-03-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:Probing the binding hot spots of KPC-2 carbapenemase using reversible tetrazole-based inhibitors
To Be Published
7U6Q
DownloadVisualize
BU of 7u6q by Molmil
TEM-1 beta-lactamase
Descriptor: Beta-lactamase, SULFATE ION
Authors:Ji, Z, Boxer, S.G, Mathews, I.I.
Deposit date:2022-03-04
Release date:2022-09-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Protein Electric Fields Enable Faster and Longer-Lasting Covalent Inhibition of beta-Lactamases.
J.Am.Chem.Soc., 144, 2022
7U57
DownloadVisualize
BU of 7u57 by Molmil
apo-CTX-M-15
Descriptor: Beta-lactamase, SULFATE ION
Authors:Ahmadvand, P, Kang, C.H.
Deposit date:2022-03-01
Release date:2022-05-25
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Characterization of Interactions between CTX-M-15 and Clavulanic Acid, Desfuroylceftiofur, Ceftiofur, Ampicillin, and Nitrocefin.
Int J Mol Sci, 23, 2022
7U4B
DownloadVisualize
BU of 7u4b by Molmil
Ampicillin-CTX-M-15
Descriptor: (2S,4S)-2-[(1S)-1-{[(2S)-2-amino-2-phenylacetyl]amino}-2-oxoethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid, Beta-lactamase, SULFATE ION
Authors:Ahmadvand, P, Kang, C.H.
Deposit date:2022-02-28
Release date:2022-05-25
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Characterization of Interactions between CTX-M-15 and Clavulanic Acid, Desfuroylceftiofur, Ceftiofur, Ampicillin, and Nitrocefin.
Int J Mol Sci, 23, 2022

224931

PDB entries from 2024-09-11

PDB statisticsPDBj update infoContact PDBjnumon