Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8ZES
DownloadVisualize
BU of 8zes by Molmil
Crystal structure of the Wuhan SARS-CoV-2 RBD (333-541) complexed with P2C5 nanobody
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Nanobody P2C5, ...
Authors:Sluchanko, N.N, Varfolomeeva, L.A, Shcheblyakov, D.V, Logunov, D.Y, Gintsburg, A.L, Popov, V.O, Boyko, K.M.
Deposit date:2024-05-06
Release date:2024-09-04
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Structural Basis for Evasion of New SARS-CoV-2 Variants from the Potent Virus-Neutralizing Nanobody Targeting the S-Protein Receptor-Binding Domain.
Biochemistry Mosc., 89, 2024
8Y8E
DownloadVisualize
BU of 8y8e by Molmil
Structure of HCoV-HKU1C spike in the inactive-2up conformation
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:Lu, Y.C, Zhang, X, Wang, H.F, Sun, L, Yang, H.T.
Deposit date:2024-02-06
Release date:2024-07-17
Last modified:2024-08-28
Method:ELECTRON MICROSCOPY (3.62 Å)
Cite:TMPRSS2 and glycan receptors synergistically facilitate coronavirus entry.
Cell, 187, 2024
8X8Q
DownloadVisualize
BU of 8x8q by Molmil
Structure of enterovirus protease in complex host factor
Descriptor: 2A protein (Fragment), Actin-histidine N-methyltransferase, ZINC ION
Authors:Gao, X, Cui, S.
Deposit date:2023-11-28
Release date:2024-05-29
Method:ELECTRON MICROSCOPY (3.14 Å)
Cite:The EV71 2A protease occupies the central cleft of SETD3 and disrupts SETD3-actin interaction.
Nat Commun, 15, 2024
8Y87
DownloadVisualize
BU of 8y87 by Molmil
Structure of HCoV-HKU1C spike in the functionally anchored-1up conformation with 1TMPRSS2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Lu, Y.C, Zhang, X, Wang, H.F, Liu, X.C, Sun, L, Yang, H.T.
Deposit date:2024-02-06
Release date:2024-07-17
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.26 Å)
Cite:TMPRSS2 and glycan receptors synergistically facilitate coronavirus entry.
Cell, 187, 2024
8Y89
DownloadVisualize
BU of 8y89 by Molmil
Structure of HCoV-HKU1C spike in the functionally anchored-3up conformation with 2TMPRSS2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Lu, Y.C, Wang, H.F, Zhang, X, Liu, X.C, Sun, L, Yang, H.T.
Deposit date:2024-02-06
Release date:2024-07-17
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (3.32 Å)
Cite:TMPRSS2 and glycan receptors synergistically facilitate coronavirus entry.
Cell, 187, 2024
9BRU
DownloadVisualize
BU of 9bru by Molmil
Intact V-ATPase State 1 in synaptophysin knock-out isolated synaptic vesicles
Descriptor: Renin receptor cytoplasmic fragment, Ribonuclease kappa, V-type proton ATPase 116 kDa subunit a 1, ...
Authors:Wang, C, Jiang, W, Yang, K, Wang, X, Guo, Q, Brunger, A.T.
Deposit date:2024-05-11
Release date:2024-06-19
Last modified:2024-08-07
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Structure and topography of the synaptic V-ATPase-synaptophysin complex.
Nature, 631, 2024
8Y8I
DownloadVisualize
BU of 8y8i by Molmil
Structure of HCoV-HKU1C spike in the glycan-activated-3up conformation
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:Lu, Y.C, Zhang, X, Wang, H.F, Sun, L, Yang, H.T.
Deposit date:2024-02-06
Release date:2024-07-17
Last modified:2024-08-28
Method:ELECTRON MICROSCOPY (3.58 Å)
Cite:TMPRSS2 and glycan receptors synergistically facilitate coronavirus entry.
Cell, 187, 2024
8Y8D
DownloadVisualize
BU of 8y8d by Molmil
Structure of HCoV-HKU1C spike in the inactive-1up conformation
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Lu, Y.C, Zhang, X, Wang, H.F, Sun, L, Yang, H.T.
Deposit date:2024-02-06
Release date:2024-07-17
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.41 Å)
Cite:TMPRSS2 and glycan receptors synergistically facilitate coronavirus entry.
Cell, 187, 2024
9GPB
DownloadVisualize
BU of 9gpb by Molmil
THE ALLOSTERIC TRANSITION OF GLYCOGEN PHOSPHORYLASE
Descriptor: GLYCOGEN PHOSPHORYLASE B, PYRIDOXAL-5'-PHOSPHATE, SULFATE ION
Authors:Barford, D, Johnson, L.N.
Deposit date:1990-12-17
Release date:1992-10-15
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The allosteric transition of glycogen phosphorylase.
Nature, 340, 1989
9BRT
DownloadVisualize
BU of 9brt by Molmil
Intact V-ATPase State 1 and synaptophysin complex in mouse brain isolated synaptic vesicles
Descriptor: Renin receptor cytoplasmic fragment, Ribonuclease kappa, Synaptophysin, ...
Authors:Wang, C, Jiang, W, Yang, K, Wang, X, Guo, Q, Brunger, A.T.
Deposit date:2024-05-11
Release date:2024-06-19
Last modified:2024-08-07
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Structure and topography of the synaptic V-ATPase-synaptophysin complex.
Nature, 631, 2024
8Y8C
DownloadVisualize
BU of 8y8c by Molmil
Structure of HCoV-HKU1C spike in the inactive-closed conformation
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:Lu, Y.C, Zhang, X, Wang, H.F, Sun, L, Yang, H.T.
Deposit date:2024-02-06
Release date:2024-07-17
Last modified:2024-08-28
Method:ELECTRON MICROSCOPY (2.95 Å)
Cite:TMPRSS2 and glycan receptors synergistically facilitate coronavirus entry.
Cell, 187, 2024
9BRA
DownloadVisualize
BU of 9bra by Molmil
Intact V-ATPase State 2 and synaptophysin complex in mouse brain isolated synaptic vesicles
Descriptor: Renin receptor cytoplasmic fragment, Ribonuclease kappa, Synaptophysin, ...
Authors:Wang, C, Jiang, W, Yang, K, Wang, X, Guo, Q, Brunger, A.T.
Deposit date:2024-05-11
Release date:2024-06-19
Last modified:2024-08-07
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Structure and topography of the synaptic V-ATPase-synaptophysin complex.
Nature, 631, 2024
8VY3
DownloadVisualize
BU of 8vy3 by Molmil
Human DNA polymerase alpha/primase - AavLEA1 (1:40 molar ratio)
Descriptor: DNA polymerase alpha catalytic subunit, DNA polymerase alpha subunit B, DNA primase large subunit, ...
Authors:Abe, K.M, Li, G, Grant, T, Lim, C.J.
Deposit date:2024-02-06
Release date:2024-09-04
Method:ELECTRON MICROSCOPY (2.98 Å)
Cite:Human PRC2 - AavLEA1 (1:40 molar ratio)
To Be Published
8Y8A
DownloadVisualize
BU of 8y8a by Molmil
Structure of HCoV-HKU1C spike in the functionally anchored-3up conformation with 3TMPRSS2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Lu, Y.C, Zhang, X, Wang, H.F, Liu, X.C, Sun, L, Yang, H.T.
Deposit date:2024-02-06
Release date:2024-07-17
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.19 Å)
Cite:TMPRSS2 and glycan receptors synergistically facilitate coronavirus entry.
Cell, 187, 2024
7BR9
DownloadVisualize
BU of 7br9 by Molmil
Crystal structure of mus musculus IRG1
Descriptor: Cis-aconitate decarboxylase
Authors:Park, H.H, Chun, H.L.
Deposit date:2020-03-27
Release date:2021-02-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:The crystal structure of mouse IRG1 suggests that cis-aconitate decarboxylase has an open and closed conformation.
Plos One, 15, 2020
8Y8F
DownloadVisualize
BU of 8y8f by Molmil
Structure of HCoV-HKU1C spike in the glycan-activated-closed conformation
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Lu, Y.C, Zhang, X, Wang, H.F, Sun, L, Yang, H.T.
Deposit date:2024-02-06
Release date:2024-07-17
Last modified:2024-08-28
Method:ELECTRON MICROSCOPY (3.07 Å)
Cite:TMPRSS2 and glycan receptors synergistically facilitate coronavirus entry.
Cell, 187, 2024
8YPJ
DownloadVisualize
BU of 8ypj by Molmil
Cyrstal structure of the MazE-mt10 Antitoxin from Mycobacterium tuberculosis
Descriptor: Antitoxin, PHOSPHATE ION
Authors:Lee, K.Y.
Deposit date:2024-03-17
Release date:2024-05-15
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:DNA binding reveals hidden interdomain allostery of a MazE antitoxin from Mycobacterium tuberculosis.
Biochem.Biophys.Res.Commun., 710, 2024
8Y7Y
DownloadVisualize
BU of 8y7y by Molmil
Local structure of HCoV-HKU1A spike in complex with TMPRSS2 and glycan
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Wang, H.F, Zhang, X, Lu, Y, Liu, X, Sun, L, Yang, H.T.
Deposit date:2024-02-05
Release date:2024-07-17
Last modified:2024-08-28
Method:ELECTRON MICROSCOPY (3.24 Å)
Cite:TMPRSS2 and glycan receptors synergistically facilitate coronavirus entry.
Cell, 187, 2024
8Y88
DownloadVisualize
BU of 8y88 by Molmil
Structure of HCoV-HKU1C spike in the functionally anchored-2up conformation with 2TMPRSS2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Lu, Y.C, Zhang, X, Wang, H.F, Liu, X.C, Sun, L, Yang, H.T.
Deposit date:2024-02-06
Release date:2024-07-17
Last modified:2024-08-28
Method:ELECTRON MICROSCOPY (3.03 Å)
Cite:TMPRSS2 and glycan receptors synergistically facilitate coronavirus entry.
Cell, 187, 2024
8ZER
DownloadVisualize
BU of 8zer by Molmil
Crystal structure of the complex of Wuhan SARS-CoV-2 RBD (319-541) with P2C5 nanobody
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Nanobody P2C5, Spike protein S1, ...
Authors:Sluchanko, N.N, Varfolomeeva, L.A, Shcheblyakov, D.V, Logunov, D.Y, Gintsburg, A.L, Popov, V.O, Boyko, K.M.
Deposit date:2024-05-06
Release date:2024-09-04
Last modified:2024-09-18
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural Basis for Evasion of New SARS-CoV-2 Variants from the Potent Virus-Neutralizing Nanobody Targeting the S-Protein Receptor-Binding Domain.
Biochemistry Mosc., 89, 2024
8Y8H
DownloadVisualize
BU of 8y8h by Molmil
Structure of HCoV-HKU1C spike in the glycan-activated-2up conformation
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:Lu, Y.C, Zhang, X, Wang, H.F, Sun, L, Yang, H.T.
Deposit date:2024-02-06
Release date:2024-07-17
Last modified:2024-08-28
Method:ELECTRON MICROSCOPY (3.65 Å)
Cite:TMPRSS2 and glycan receptors synergistically facilitate coronavirus entry.
Cell, 187, 2024
8Y8J
DownloadVisualize
BU of 8y8j by Molmil
Local structure of HCoV-HKU1C spike in complex with glycan
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Lu, Y.C, Zhang, X, Wang, H.F, Sun, L, Yang, H.T.
Deposit date:2024-02-06
Release date:2024-07-17
Last modified:2024-08-28
Method:ELECTRON MICROSCOPY (3.57 Å)
Cite:TMPRSS2 and glycan receptors synergistically facilitate coronavirus entry.
Cell, 187, 2024
8Y8B
DownloadVisualize
BU of 8y8b by Molmil
Local structure of HCoV-HKU1C spike in complex with TMPRSS2 and glycan
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Wang, H.F, Zhang, X, Lu, Y.C, Liu, X.C, Sun, L, Yang, H.T.
Deposit date:2024-02-06
Release date:2024-07-17
Last modified:2024-08-28
Method:ELECTRON MICROSCOPY (3.01 Å)
Cite:TMPRSS2 and glycan receptors synergistically facilitate coronavirus entry.
Cell, 187, 2024
8VZ0
DownloadVisualize
BU of 8vz0 by Molmil
Crystal Structure of the ER-alpha Ligand-binding Domain (L372S, L536S) in complex with k-400
Descriptor: (1S,2R,4S)-N-(cyclopropylmethyl)-5,6-bis(4-hydroxyphenyl)-N-(4-methoxyphenyl)-7-oxabicyclo[2.2.1]hept-5-ene-2-sulfonamide, Estrogen receptor
Authors:Min, C.K, Nwachukwu, J.C, Hou, Y, Russo, R.J, Papa, A, Min, J, Peng, R, Kim, S.H, Ziegler, Y, Rangarajan, E.S, Izard, T, Katzenellenbogen, B.S, Katzenellenbogen, J.A, Nettles, K.W.
Deposit date:2024-02-09
Release date:2024-06-12
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Asymmetric allostery in estrogen receptor-alpha homodimers drives responses to the ensemble of estrogens in the hormonal milieu.
Proc.Natl.Acad.Sci.USA, 121, 2024
8Y7X
DownloadVisualize
BU of 8y7x by Molmil
Structure of HCoV-HKU1A spike in the functionally anchored-3up conformation with 3TMPRSS2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Lu, Y.C, Zhang, X, Wang, H.F, Liu, X.C, Sun, L, Yang, H.T.
Deposit date:2024-02-05
Release date:2024-07-17
Last modified:2024-08-28
Method:ELECTRON MICROSCOPY (3.09 Å)
Cite:TMPRSS2 and glycan receptors synergistically facilitate coronavirus entry.
Cell, 187, 2024

226262

PDB entries from 2024-10-16

PDB statisticsPDBj update infoContact PDBjnumon