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8JKN
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T95R mutant IRF4 DNA-binding domain bound to an DNA containing GAAA motif
Descriptor: GAAA-Forward, GAAA-Reverse, Interferon regulatory factor 4
Authors:Wang, G, Feng, X, Ding, J.
Deposit date:2023-06-01
Release date:2023-09-20
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.92 Å)
Cite:Molecular basis for the functional roles of the multimorphic T95R mutation of IRF4 causing human autosomal dominant combined immunodeficiency.
Structure, 31, 2023
8JKO
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T95R mutant IRF4 DNA-binding domain bound to an DNA containing GATA motif
Descriptor: GATA-Forward, GATA-Reverse, Interferon regulatory factor 4
Authors:Wang, G, Feng, X, Ding, J.
Deposit date:2023-06-01
Release date:2023-09-20
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Molecular basis for the functional roles of the multimorphic T95R mutation of IRF4 causing human autosomal dominant combined immunodeficiency.
Structure, 31, 2023
7K3R
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BU of 7k3r by Molmil
Cryo-EM structure of AIM2-PYD filament
Descriptor: Interferon-inducible protein AIM2
Authors:Zheng, W, Matyszewski, M, Sohn, J, Egelman, E.H.
Deposit date:2020-09-12
Release date:2021-05-26
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Distinct axial and lateral interactions within homologous filaments dictate the signaling specificity and order of the AIM2-ASC inflammasome.
Nat Commun, 12, 2021
1AHM
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DER F 2, THE MAJOR MITE ALLERGEN FROM DERMATOPHAGOIDES FARINAE, NMR, 10 STRUCTURES
Descriptor: DER F 2
Authors:Ichikawa, S, Hatanaka, H, Yuuki, T, Iwamoto, N, Ogura, K, Okumura, Y, Inagaki, F.
Deposit date:1997-04-07
Release date:1998-04-08
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Solution structure of Der f 2, the major mite allergen for atopic diseases.
J.Biol.Chem., 273, 1998
1AHK
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DER F 2, THE MAJOR MITE ALLERGEN FROM DERMATOPHAGOIDES FARINAE, NMR, MINIMIZED AVERAGE STRUCTURE
Descriptor: DER F 2
Authors:Ichikawa, S, Hatanaka, H, Yuuki, T, Iwamoto, N, Ogura, K, Okumura, Y, Inagaki, F.
Deposit date:1997-04-07
Release date:1998-04-08
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Solution structure of Der f 2, the major mite allergen for atopic diseases.
J.Biol.Chem., 273, 1998
7X45
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Grass carp interferon gamma related
Descriptor: Interferon gamma
Authors:Wang, J, Zou, J, Zhu, X.
Deposit date:2022-03-02
Release date:2022-09-14
Last modified:2023-04-19
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Novel Dimeric Architecture of an IFN-gamma-Related Cytokine Provides Insights into Subfunctionalization of Type II IFNs in Teleost Fish.
J Immunol., 209, 2022
7DNJ
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K63-polyUb MDA5CARDs complex
Descriptor: Interferon-induced helicase C domain-containing protein 1, Ubiquitin
Authors:Song, B, Chen, Y, Luo, D.H, Zheng, J.
Deposit date:2020-12-09
Release date:2021-10-13
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Ordered assembly of the cytosolic RNA-sensing MDA5-MAVS signaling complex via binding to unanchored K63-linked poly-ubiquitin chains.
Immunity, 54, 2021
7DNI
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MDA5 CARDs-MAVS CARD polyUb complex
Descriptor: Interferon-induced helicase C domain-containing protein 1, Mitochondrial antiviral-signaling protein, Ubiquitin
Authors:Song, B, Chen, Y, Luo, D.H, Zheng, J.
Deposit date:2020-12-09
Release date:2021-10-13
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Ordered assembly of the cytosolic RNA-sensing MDA5-MAVS signaling complex via binding to unanchored K63-linked poly-ubiquitin chains.
Immunity, 54, 2021
7WKH
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the grass carp IFNa
Descriptor: Interferon
Authors:Zou, J, WANG, J, Wang, Z.
Deposit date:2022-01-09
Release date:2022-02-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Structural and Functional Analyses of Type I IFNa Shed Light Into Its Interaction With Multiple Receptors in Fish.
Front Immunol, 13, 2022
3LJB
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BU of 3ljb by Molmil
Structural basis of oligomerisation in the MxA stalk
Descriptor: Interferon-induced GTP-binding protein Mx1
Authors:Gao, S, Daumke, O.
Deposit date:2010-01-26
Release date:2010-05-05
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis of oligomerization in the stalk region of dynamin-like MxA.
Nature, 465, 2010
3SZR
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Crystal structure of modified nucleotide-free human MxA
Descriptor: Interferon-induced GTP-binding protein Mx1
Authors:Gao, S, Daumke, O.
Deposit date:2011-07-19
Release date:2011-10-12
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structure of myxovirus resistance protein a reveals intra- and intermolecular domain interactions required for the antiviral function.
Immunity, 35, 2011
6C6K
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BU of 6c6k by Molmil
Structural basis for preferential recognition of cap 0 RNA by a human IFIT1-IFIT3 protein complex
Descriptor: Interferon-induced protein with tetratricopeptide repeats 1, Interferon-induced protein with tetratricopeptide repeats 3, MAGNESIUM ION, ...
Authors:Amarasinghe, G.K, Leung, D.W, Johnson, B, Xu, W.
Deposit date:2018-01-18
Release date:2018-04-04
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Human IFIT3 Modulates IFIT1 RNA Binding Specificity and Protein Stability.
Immunity, 48, 2018
3M66
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BU of 3m66 by Molmil
Crystal structure of human Mitochondrial Transcription Termination Factor 3
Descriptor: mTERF domain-containing protein 1, mitochondrial
Authors:Spahr, H, Samuelsson, T, Hallberg, B.M, Gustafsson, C.M.
Deposit date:2010-03-15
Release date:2010-05-05
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of mitochondrial transcription termination factor 3 reveals a novel nucleic acid-binding domain.
Biochem.Biophys.Res.Commun., 397, 2010
3UX9
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Structural insights into a human anti-IFN antibody exerting therapeutic potential for systemic lupus erythematosus
Descriptor: Interferon alpha-1/13, ScFv antibody
Authors:Ouyang, S, Zhao, L.X, Liang, W, Shaw, N, Liu, Z.-J, Liang, M.-F.
Deposit date:2011-12-04
Release date:2012-02-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural insights into a human anti-IFN antibody exerting therapeutic potential for systemic lupus erythematosus
J.Mol.Med., 2012
3B6Y
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BU of 3b6y by Molmil
Crystal Structure of the Second HIN-200 Domain of Interferon-Inducible Protein 16
Descriptor: Gamma-interferon-inducible protein Ifi-16, SULFATE ION
Authors:Liao, J.C.C, Lam, R, Ravichandran, M, Duan, S, Tempel, W, Chirgadze, N.Y, Arrowsmith, C.H, Northeast Structural Genomics Consortium (NESG)
Deposit date:2007-10-29
Release date:2007-11-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal Structure Analysis of the Second HIN Domain of IFI16.
To be Published
4D5N
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BU of 4d5n by Molmil
Cryo-EM structures of ribosomal 80S complexes with termination factors and cricket paralysis virus IRES reveal the IRES in the translocated state
Descriptor: CRICKET PARALYSIS VIRUS IRES RNA, EUKARYOTIC PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1
Authors:Muhs, M, Hilal, T, Mielke, T, Skabkin, M.A, Sanbonmatsu, K.Y, Pestova, T.V, Spahn, C.M.T.
Deposit date:2014-11-06
Release date:2015-02-04
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (9 Å)
Cite:Cryo-Em of Ribosomal 80S Complexes with Termination Factors Reveals the Translocated Cricket Paralysis Virus Ires.
Mol.Cell, 57, 2015
4QGU
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BU of 4qgu by Molmil
protein domain complex with ssDNA
Descriptor: DNA (5'-D(P*AP*GP*GP*CP*CP*GP*GP*CP*GP*TP*GP*A)-3'), Gamma-interferon-inducible protein 16
Authors:Ni, X, Ru, H, Zhao, L, Shaw, N, Ding, W, Songying, O, Liu, Z.-J.
Deposit date:2014-05-25
Release date:2015-06-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.545 Å)
Cite:New insights into the structural basis of DNA recognition by HINa and HINb domains of IFI16.
J Mol Cell Biol, 8, 2016
3RLN
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BU of 3rln by Molmil
Structural Basis of Cytosolic DNA Recognition by Innate Immune Receptors
Descriptor: Gamma-interferon-inducible protein 16
Authors:Jin, T.C, Xiao, T.
Deposit date:2011-04-19
Release date:2012-04-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.251 Å)
Cite:Structures of the HIN Domain:DNA Complexes Reveal Ligand Binding and Activation Mechanisms of the AIM2 Inflammasome and IFI16 Receptor.
Immunity, 36, 2012
1G9O
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BU of 1g9o by Molmil
FIRST PDZ DOMAIN OF THE HUMAN NA+/H+ EXCHANGER REGULATORY FACTOR
Descriptor: NHE-RF
Authors:Karthikeyan, S, Leung, T, Birrane, G, Webster, G, Ladias, J.A.A.
Deposit date:2000-11-26
Release date:2001-05-23
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of the PDZ1 domain of human Na(+)/H(+) exchanger regulatory factor provides insights into the mechanism of carboxyl-terminal leucine recognition by class I PDZ domains.
J.Mol.Biol., 308, 2001
2D4H
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BU of 2d4h by Molmil
Crystal-structure of the N-terminal large GTPase Domain of human Guanylate Binding protein 1 (hGBP1) in complex with GMP
Descriptor: GUANOSINE-5'-MONOPHOSPHATE, Interferon-induced guanylate-binding protein 1
Authors:Ghosh, A, Praefcke, G.J.K, Renault, L, Wittinghofer, A, Herrmann, C.
Deposit date:2005-10-19
Release date:2006-03-07
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:How guanylate-binding proteins achieve assembly-stimulated processive cleavage of GTP to GMP.
Nature, 440, 2006
1DG3
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STRUCTURE OF HUMAN GUANYLATE BINDING PROTEIN-1 IN NUCLEOTIDE FREE FORM
Descriptor: PROTEIN (INTERFERON-INDUCED GUANYLATE-BINDING PROTEIN 1)
Authors:Prakash, B, Praefcke, G.J.K, Renault, L, Wittinghofer, A, Herrmann, C.
Deposit date:1999-11-23
Release date:2000-10-11
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of human guanylate-binding protein 1 representing a unique class of GTP-binding proteins.
Nature, 403, 2000
2B8W
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Crystal-structure of the N-terminal Large GTPase Domain of human Guanylate Binding protein 1 (hGBP1) in complex with GMP/AlF4
Descriptor: GUANOSINE-5'-MONOPHOSPHATE, Interferon-induced guanylate-binding protein 1, MAGNESIUM ION, ...
Authors:Ghosh, A, Praefcke, G.J.K, Renault, L, Wittinghofer, A, Herrmann, C.
Deposit date:2005-10-10
Release date:2006-03-07
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:How guanylate-binding proteins achieve assembly-stimulated processive cleavage of GTP to GMP.
Nature, 440, 2006
2B92
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Crystal-structure of the N-terminal Large GTPase Domain of human Guanylate Binding protein 1 (hGBP1) in complex with GDP/AlF3
Descriptor: ALUMINUM FLUORIDE, GUANOSINE-5'-DIPHOSPHATE, Interferon-induced guanylate-binding protein 1, ...
Authors:Ghosh, A, Praefcke, G.J.K, Renault, L, Wittinghofer, A, Herrmann, C.
Deposit date:2005-10-10
Release date:2006-03-07
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:How guanylate-binding proteins achieve assembly-stimulated processive cleavage of GTP to GMP.
Nature, 440, 2006
1F5N
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HUMAN GUANYLATE BINDING PROTEIN-1 IN COMPLEX WITH THE GTP ANALOGUE, GMPPNP.
Descriptor: INTERFERON-INDUCED GUANYLATE-BINDING PROTEIN 1, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
Authors:Prakash, B, Renault, L, Praefcke, G.J.K, Herrmann, C, Wittinghofer, A.
Deposit date:2000-06-15
Release date:2000-09-27
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Triphosphate structure of guanylate-binding protein 1 and implications for nucleotide binding and GTPase mechanism.
EMBO J., 19, 2000
3QU3
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BU of 3qu3 by Molmil
Crystal structure of IRF-7 DBD apo form
Descriptor: 1,2-ETHANEDIOL, Interferon regulatory factor 7, SODIUM ION
Authors:De Ioannes, P.E, Escalante, C.R, Aggarwal, A.K.
Deposit date:2011-02-23
Release date:2011-06-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structures of apo IRF-3 and IRF-7 DNA binding domains: effect of loop L1 on DNA binding.
Nucleic Acids Res., 39, 2011

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PDB entries from 2024-08-07

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