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PDB: 46 results

4HDD
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BU of 4hdd by Molmil
Domain swapping in the cytoplasmic domain of the Escherichia coli rhomboid protease
Descriptor: ACETATE ION, Rhomboid protease GlpG
Authors:Lazareno-Saez, C, Arutyunova, E, Coquelle, N, Lemieux, M.J.
Deposit date:2012-10-02
Release date:2013-02-06
Last modified:2013-05-22
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Domain swapping in the cytoplasmic domain of the Escherichia coli rhomboid protease.
J.Mol.Biol., 425, 2013
2XOV
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Crystal Structure of E.coli rhomboid protease GlpG, native enzyme
Descriptor: GLYCEROL, RHOMBOID PROTEASE GLPG, nonyl beta-D-glucopyranoside
Authors:Vinothkumar, K.R, Strisovsky, K, Andreeva, A, Christova, Y, Verhelst, S, Freeman, M.
Deposit date:2010-08-24
Release date:2010-10-13
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:The structural basis for catalysis and substrate specificity of a rhomboid protease.
EMBO J., 29, 2010
2XTV
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Structure of E.coli rhomboid protease GlpG, active site mutant, S201T, orthorhombic crystal form
Descriptor: 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLINE, RHOMBOID PROTEASE GLPG
Authors:Vinothkumar, K.R.
Deposit date:2010-10-12
Release date:2011-02-02
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of rhomboid protease in a lipid environment.
J. Mol. Biol., 407, 2011
3B44
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Crystal structure of GlpG W136A mutant
Descriptor: glpG, nonyl beta-D-glucopyranoside
Authors:Wang, Y, Maegawa, S, Akiyama, Y, Ha, Y.
Deposit date:2007-10-23
Release date:2008-01-22
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The role of L1 loop in the mechanism of rhomboid intramembrane protease GlpG.
J.Mol.Biol., 374, 2007
5MTF
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A modular route to novel potent and selective inhibitors of rhomboid intramembrane proteases
Descriptor: CHLORIDE ION, Rhomboid protease GlpG, inhibitor, ...
Authors:Ticha, A, Stanchev, S, Vinothkumar, K.R, Mikles, D.C, Pachl, P, Svehlova, K, Nguyen, M.T.N, Verhelst, S.H.L, Johnson, D, Bachovchin, D, Lepsik, M, Majer, P, Strisovsky, K.
Deposit date:2017-01-09
Release date:2017-11-15
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:General and Modular Strategy for Designing Potent, Selective, and Pharmacologically Compliant Inhibitors of Rhomboid Proteases.
Cell Chem Biol, 24, 2017
2XTU
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Structure of E.coli rhomboid protease GlpG active site mutant, S201T in trigonal crystal form
Descriptor: RHOMBOID PROTEASE GLPG, nonyl beta-D-glucopyranoside
Authors:Vinothkumar, K.R.
Deposit date:2010-10-12
Release date:2011-02-02
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure of Rhomboid Protease in a Lipid Environment
J.Mol.Biol., 407, 2011
3B45
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Crystal structure of GlpG at 1.9A resolution
Descriptor: glpG, nonyl beta-D-glucopyranoside
Authors:Wang, Y, Maegawa, S, Akiyama, Y, Ha, Y.
Deposit date:2007-10-23
Release date:2008-01-22
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The role of L1 loop in the mechanism of rhomboid intramembrane protease GlpG.
J.Mol.Biol., 374, 2007
5MT8
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Structure of E.coli GlpG in complex with peptide derived inhibitor Ac-RVRHA-cmk
Descriptor: ACE-ARG-VAL-ARG-HIS-ALA-0QE, CHLORIDE ION, Rhomboid protease GlpG, ...
Authors:Vinothkumar, K.R.
Deposit date:2017-01-06
Release date:2017-11-15
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:General and Modular Strategy for Designing Potent, Selective, and Pharmacologically Compliant Inhibitors of Rhomboid Proteases.
Cell Chem Biol, 24, 2017
5MT7
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BU of 5mt7 by Molmil
Structure of E.coli GlpG in complex with peptide derived inhibitor Ac-VRHA-cmk
Descriptor: ACE-VAL-ARG-HIS-ALA-0QE, Rhomboid protease GlpG
Authors:Vinothkumar, K.R.
Deposit date:2017-01-06
Release date:2017-11-15
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:General and Modular Strategy for Designing Potent, Selective, and Pharmacologically Compliant Inhibitors of Rhomboid Proteases.
Cell Chem Biol, 24, 2017
2XOW
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BU of 2xow by Molmil
Structure of GlpG in complex with a mechanism-based isocoumarin inhibitor
Descriptor: 5-AMINO-2-(2-METHOXY-2-OXOETHYL)BENZOIC ACID, RHOMBOID PROTEASE GLPG, nonyl beta-D-glucopyranoside
Authors:Vinothkumar, K.R, Strisovsky, K, Andreeva, A, Christova, Y, Verhelst, S, Freeman, M.
Deposit date:2010-08-24
Release date:2010-10-13
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:The Structural Basis for Catalysis and Substrate Specificity of a Rhomboid Protease
Embo J., 29, 2010
2IC8
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BU of 2ic8 by Molmil
Crystal structure of GlpG
Descriptor: Protein glpG, nonyl beta-D-glucopyranoside
Authors:Ha, Y.
Deposit date:2006-09-12
Release date:2006-10-17
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of a rhomboid family intramembrane protease.
Nature, 444, 2006
5MT6
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BU of 5mt6 by Molmil
Structure of E.coli GlpG in complex with peptide derived inhibitor Ac-RVRHA-phenylethyl-ketoamide
Descriptor: ACE-ARG-VAL-ARG-HIS-ALA-V9C, Rhomboid protease GlpG, nonyl beta-D-glucopyranoside
Authors:Vinothkumar, K.R.
Deposit date:2017-01-06
Release date:2017-11-15
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:General and Modular Strategy for Designing Potent, Selective, and Pharmacologically Compliant Inhibitors of Rhomboid Proteases.
Cell Chem Biol, 24, 2017
3ZEB
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BU of 3zeb by Molmil
A complex of GlpG with isocoumarin inhibitor covalently bonded to serine 201 and histidine 150
Descriptor: 2-phenylethyl 2-(4-azanyl-2-methanoyl-phenyl)ethanoate, CHLORIDE ION, RHOMBOID PROTEASE GLPG, ...
Authors:Vinothkumar, K.R, voskya, O, Kuettler, E.V, Brouwer, A.J, Liskamp, R.M.J, Verhelst, S.H.L.
Deposit date:2012-12-04
Release date:2013-02-13
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Activity-Based Probes for Rhomboid Proteases Discovered in a Mass Spectrometry-Based Assay.
Proc.Natl.Acad.Sci.USA, 110, 2013
3ZMI
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BU of 3zmi by Molmil
Structure of E.coli rhomboid protease GlpG in complex with monobactam L29
Descriptor: RHOMBOID PROTEASE GLPG, nonyl beta-D-glucopyranoside, phenyl N-[(1R)-3-oxidanylidene-1-phenyl-propyl]carbamate
Authors:Vinothkumar, K.R, Pierrat, O.A, Large, J.M, Freeman, M.
Deposit date:2013-02-11
Release date:2013-05-22
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of Rhomboid Protease in Complex with Beta-Lactam Inhibitors Defines the S2' Cavity.
Structure, 21, 2013
5F5B
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BU of 5f5b by Molmil
Structure of E.Coli GlpG complexed with peptidic inhibitor Ac-VRMA-CHO
Descriptor: Rhomboid protease GlpG, peptidic derivative of Gurken: ACE-VAL-ARG-MET-ALA-aldehyde
Authors:Urban, S, Cho, S, Dickey, S.W.
Deposit date:2015-12-04
Release date:2016-02-17
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structures and Inhibition Kinetics Reveal a Two-Stage Catalytic Mechanism with Drug Design Implications for Rhomboid Proteolysis.
Mol.Cell, 61, 2016
5F5G
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BU of 5f5g by Molmil
Structure of E.Coli GlpG Y205F mutant complexed with peptidic inhibitor Ac-RMA-CHO in the DMPC/CHAPSO bicelle
Descriptor: ACE-ARG-MET-ALA-aldehyde, Rhomboid protease GlpG
Authors:Urban, S, Cho, S, Dickey, S.W.
Deposit date:2015-12-04
Release date:2016-04-06
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structures and Inhibition Kinetics Reveal a Two-Stage Catalytic Mechanism with Drug Design Implications for Rhomboid Proteolysis.
Mol.Cell, 61, 2016
2IRV
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BU of 2irv by Molmil
Crystal structure of GlpG, a rhomboid intramembrane serine protease
Descriptor: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, DODECYL-BETA-D-MALTOSIDE, LAURYL DIMETHYLAMINE-N-OXIDE, ...
Authors:Bibi, E, Fass, D, Ben-Shem, A.
Deposit date:2006-10-16
Release date:2006-10-31
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for intramembrane proteolysis by rhomboid serine proteases.
Proc.Natl.Acad.Sci.Usa, 104, 2007
6XRO
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BU of 6xro by Molmil
Crystal structure of GlpG in complex with peptide boronate inhibitor, Ac-KRFRSMQYSA-B(OH)2
Descriptor: CHLORIDE ION, Rhomboid protease GlpG, SODIUM ION, ...
Authors:Urban, S, Cho, S.
Deposit date:2020-07-13
Release date:2020-09-16
Last modified:2024-04-24
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Designed Parasite-Selective Rhomboid Inhibitors Block Invasion and Clear Blood-Stage Malaria.
Cell Chem Biol, 27, 2020
6PJ7
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BU of 6pj7 by Molmil
Time-resolved structural snapshot of proteolysis by GlpG inside the membrane
Descriptor: Peptide aldehyde inhibitor, Rhomboid protease GlpG
Authors:Urban, S, Cho, S.
Deposit date:2019-06-28
Release date:2019-10-02
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Ten catalytic snapshots of rhomboid intramembrane proteolysis from gate opening to peptide release.
Nat.Struct.Mol.Biol., 26, 2019
6PJ4
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BU of 6pj4 by Molmil
Time-resolved structural snapshot of proteolysis by GlpG inside the membrane
Descriptor: Peptide aldehyde inhibitor, Rhomboid protease GlpG
Authors:Urban, S, Cho, S.
Deposit date:2019-06-27
Release date:2019-10-02
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Ten catalytic snapshots of rhomboid intramembrane proteolysis from gate opening to peptide release.
Nat.Struct.Mol.Biol., 26, 2019
6VJ9
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BU of 6vj9 by Molmil
Crystal structure of GlpG in complex with peptide boronate inhibitor
Descriptor: ACE-VAL-ARG-MET-B2A, Rhomboid family intramembrane serine protease GlpG
Authors:Urban, S, Cho, S.
Deposit date:2020-01-15
Release date:2020-09-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Designed Parasite-Selective Rhomboid Inhibitors Block Invasion and Clear Blood-Stage Malaria.
Cell Chem Biol, 27, 2020
6VJ8
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Crystal structure of GlpG in complex with peptide chloromethylketone inhibitor
Descriptor: Peptide chloromethylketone inhibitor, Rhomboid family intramembrane serine protease GlpG
Authors:Urban, S, Cho, S.
Deposit date:2020-01-15
Release date:2020-09-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Designed Parasite-Selective Rhomboid Inhibitors Block Invasion and Clear Blood-Stage Malaria.
Cell Chem Biol, 27, 2020
3ZMJ
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BU of 3zmj by Molmil
Structure of E.coli rhomboid protease GlpG in complex with monobactam L61
Descriptor: 2-methylpropyl N-[(1R)-3-oxidanylidene-1-phenyl-propyl]carbamate, CHLORIDE ION, RHOMBOID PROTEASE GLPG, ...
Authors:Vinothkumar, K.R, Pierrat, O, Large, J.M, Freeman, M.
Deposit date:2013-02-11
Release date:2013-05-22
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of Rhomboid Protease in Complex with Beta-Lactam Inhibitors Defines the S2' Cavity.
Structure, 21, 2013
3ZMH
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BU of 3zmh by Molmil
Structure of E.coli rhomboid protease GlpG in complex with monobactam L62
Descriptor: CHLORIDE ION, CYCLOPENTYL 2-OXO-4-PHENYLAZETIDINE-1-CARBOXYLATE, RHOMBOID PROTEASE GLPG, ...
Authors:Vinothkumar, K.R, Pierrat, O.A, Large, J.M, Freeman, M.
Deposit date:2013-02-11
Release date:2013-05-22
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of rhomboid protease in complex with beta-lactam inhibitors defines the S2' cavity.
Structure, 21, 2013
3TXT
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Crystal structure of GlpG in complex with inhibitor DFP
Descriptor: DIISOPROPYL PHOSPHONATE, Rhomboid protease glpG
Authors:Xue, Y, Ha, Y.
Deposit date:2011-09-23
Release date:2011-12-07
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The crystal structure of rhomboid protease GlpG in complex with a mechanism-based inhibitor
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