Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4U54
DownloadVisualize
BU of 4u54 by Molmil
IMPORTIN-ALPHA MINOR NLS SITE INHIBITOR
Descriptor: Importin subunit alpha-1, N-methyl-1-[3-(pyridin-3-yl)phenyl]methanamine
Authors:Stewart, M, Valkov, E, Holvey, R.S.
Deposit date:2014-07-24
Release date:2015-05-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Selective Targeting of the TPX2 Site of Importin-alpha Using Fragment-Based Ligand Design.
Chemmedchem, 10, 2015
5HOO
DownloadVisualize
BU of 5hoo by Molmil
Crystal structure of the Mos1 Strand Transfer Complex
Descriptor: MAGNESIUM ION, Mariner Mos1 transposase, Mos1 IR DNA NTS, ...
Authors:Richardson, J.M, Morris, E.R.
Deposit date:2016-01-19
Release date:2016-06-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:A bend, flip and trap mechanism for transposon integration.
Elife, 5, 2016
4U7Y
DownloadVisualize
BU of 4u7y by Molmil
Structure of the complex of VPS4B MIT and IST1 MIM
Descriptor: IST1 homolog, Vacuolar protein sorting-associated protein 4B
Authors:Guo, E.Z, Xu, Z.
Deposit date:2014-07-31
Release date:2015-02-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.502 Å)
Cite:Distinct Mechanisms of Recognizing Endosomal Sorting Complex Required for Transport III (ESCRT-III) Protein IST1 by Different Microtubule Interacting and Trafficking (MIT) Domains.
J.Biol.Chem., 290, 2015
4U2U
DownloadVisualize
BU of 4u2u by Molmil
Bak domain swapped dimer induced by BidBH3 with CHAPS
Descriptor: Bcl-2 homologous antagonist/killer
Authors:Brouwer, J.M, Colman, P.M, Czabotar, P.E.
Deposit date:2014-07-18
Release date:2014-09-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Bak Core and Latch Domains Separate during Activation, and Freed Core Domains Form Symmetric Homodimers.
Mol.Cell, 55, 2014
4U5T
DownloadVisualize
BU of 4u5t by Molmil
Crystal Structure of VBP Leucine Zipper with Bound Arylstibonic Acid
Descriptor: (2Z)-3-{3-[dihydroxy(oxido)-lambda~5~-stibanyl]phenyl}prop-2-enoic acid, VBP leucine zipper
Authors:Stagno, J.R, Ji, X.
Deposit date:2014-07-25
Release date:2014-08-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.301 Å)
Cite:P6981, an arylstibonic acid, is a novel low nanomolar inhibitor of cAMP response element-binding protein binding to DNA.
Mol.Pharmacol., 82, 2012
4U5U
DownloadVisualize
BU of 4u5u by Molmil
IMPORTIN-ALPHA MINOR NLS SITE INHIBITOR
Descriptor: Importin subunit alpha-1, N~2~-[3-(pyridin-3-yl)benzyl]-L-lysinamide
Authors:Stewart, M, Valkov, E, Holvey, R.S.
Deposit date:2014-07-25
Release date:2015-05-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Selective Targeting of the TPX2 Site of Importin-alpha Using Fragment-Based Ligand Design.
Chemmedchem, 10, 2015
4U58
DownloadVisualize
BU of 4u58 by Molmil
IMPORTIN-ALPHA MINOR NLS SITE INHIBITOR
Descriptor: Importin subunit alpha-1, N~2~-[4-(pyridin-3-yl)benzoyl]-L-lysinamide
Authors:Stewart, M, Valkov, E, Holvey, R.S.
Deposit date:2014-07-24
Release date:2015-05-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:Selective Targeting of the TPX2 Site of Importin-alpha Using Fragment-Based Ligand Design.
Chemmedchem, 10, 2015
4U5O
DownloadVisualize
BU of 4u5o by Molmil
IMPORTIN-ALPHA MINOR NLS SITE INHIBITOR
Descriptor: Importin subunit alpha-1, N~2~-[4-(pyridin-3-yl)benzyl]-D-lysinamide
Authors:Stewart, M, Valkov, E, Holvey, R.S.
Deposit date:2014-07-25
Release date:2015-05-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Selective Targeting of the TPX2 Site of Importin-alpha Using Fragment-Based Ligand Design.
Chemmedchem, 10, 2015
7SB8
DownloadVisualize
BU of 7sb8 by Molmil
d(GA(CGA)5) parallel-stranded homo-duplex
Descriptor: COBALT HEXAMMINE(III), GA(CGA)5, SODIUM ION, ...
Authors:Luteran, E.M, Paukstelis, P.J.
Deposit date:2021-09-24
Release date:2021-10-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.317 Å)
Cite:The parallel-stranded d(CGA) duplex is a highly predictable structural motif with two conformationally distinct strands.
Acta Crystallogr D Struct Biol, 78, 2022
4U7I
DownloadVisualize
BU of 4u7i by Molmil
Structure of the complex of Spartin MIT and IST1 MIM
Descriptor: IST1 homolog, Spartin
Authors:Guo, E.Z, Xu, Z.
Deposit date:2014-07-30
Release date:2015-02-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.794 Å)
Cite:Distinct Mechanisms of Recognizing Endosomal Sorting Complex Required for Transport III (ESCRT-III) Protein IST1 by Different Microtubule Interacting and Trafficking (MIT) Domains.
J.Biol.Chem., 290, 2015
1B72
DownloadVisualize
BU of 1b72 by Molmil
PBX1, HOMEOBOX PROTEIN HOX-B1/DNA TERNARY COMPLEX
Descriptor: DNA (5'-D(*AP*CP*TP*CP*TP*AP*TP*GP*AP*TP*TP*GP*AP*TP*CP*GP*GP*CP*TP*G)-3'), DNA (5'-D(*TP*CP*AP*GP*CP*CP*GP*AP*TP*CP*AP*AP*TP*CP*AP*TP*AP*GP*AP*G)-3'), PROTEIN (HOMEOBOX PROTEIN HOX-B1), ...
Authors:Piper, D.E, Batchelor, A.H, Chang, C.-P, Cleary, M.L, Wolberger, C.
Deposit date:1999-01-27
Release date:1999-02-19
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structure of a HoxB1-Pbx1 heterodimer bound to DNA: role of the hexapeptide and a fourth homeodomain helix in complex formation.
Cell(Cambridge,Mass.), 96, 1999
6ZMV
DownloadVisualize
BU of 6zmv by Molmil
Structure of muramidase from Trichobolus zukalii
Descriptor: GLYCEROL, SULFATE ION, muramidase
Authors:Moroz, O.V, Blagova, E, Taylor, E, Turkenburg, J.P, Skov, L.K, Gippert, G.P, Schnorr, K.M, Ming, L, Ye, L, Klausen, M, Cohn, M.T, Schmidt, E.G.W, Nymand-Grarup, S, Davies, G.J, Wilson, K.S.
Deposit date:2020-07-04
Release date:2021-07-14
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Fungal GH25 muramidases: New family members with applications in animal nutrition and a crystal structure at 0.78 angstrom resolution.
Plos One, 16, 2021
4UJ6
DownloadVisualize
BU of 4uj6 by Molmil
Structure of surface layer protein SbsC, domains 1-6
Descriptor: SURFACE LAYER PROTEIN
Authors:Dordic, A, Pavkov-Keller, T, Eder, M, Egelseer, E.M, Davis, K, Mills, D, Sleytr, U.B, Kuehlbrandt, W, Vonck, J, Keller, W.
Deposit date:2015-04-08
Release date:2016-04-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structure of Surface Layer Protein Sbsc, Domains 1-6
To be Published
4X0Q
DownloadVisualize
BU of 4x0q by Molmil
Ternary complex of human DNA polymerase theta C-terminal domain binding ddGTP opposite dCMP
Descriptor: 2'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE, DNA (5'-D(*CP*GP*TP*CP*CP*AP*AP*TP*GP*AP*CP*AP*G)-3'), DNA (5'-D(P*CP*TP*GP*TP*CP*AP*TP*TP*G)-3'), ...
Authors:Zahn, K.E, Doublie, S.
Deposit date:2014-11-22
Release date:2015-03-18
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Human DNA polymerase theta grasps the primer terminus to mediate DNA repair.
Nat.Struct.Mol.Biol., 22, 2015
4UHY
DownloadVisualize
BU of 4uhy by Molmil
Crystal structure of the human RGMA-BMP2 complex
Descriptor: BONE MORPHOGENETIC PROTEIN 2, REPULSIVE GUIDANCE MOLECULE A
Authors:Healey, E.G, Bishop, B, Elegheert, J, Bell, C.H, Padilla-Parra, S, Siebold, C.
Deposit date:2015-03-27
Release date:2015-05-06
Last modified:2015-06-17
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Repulsive Guidance Molecule is a Structural Bridge between Neogenin and Bone Morphogenetic Protein.
Nat.Struct.Mol.Biol., 22, 2015
4UCT
DownloadVisualize
BU of 4uct by Molmil
Fragment bound to H.influenza NAD dependent DNA ligase
Descriptor: 1-(2,4-dimethylbenzyl)-6-oxo-1,6-dihydropyridine-3-carboxamide, 2-amino-6-methyl-5-(propan-2-yloxy)-3H-[1,2,4]triazolo[1,5-a]pyrimidin-8-ium, DNA LIGASE
Authors:Hale, M, Brassington, C, Carcanague, D, Embrey, K, Eyermann, C.J, Giacobbe, R.A, Gingipali, L, Gowravaram, M, Harang, J, Howard, T, Ioannidis, G, Jahic, H, Kutschke, A, Laganas, V.A, Loch, J, Miller, M.D, Murphy-Benenato, K.E, Oguto, H, Otterbein, L, Patel, S.J, Shapiro, A.B, Boriack-Sjodin, P.A.
Deposit date:2014-12-04
Release date:2015-10-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:From Fragments to Leads: Novel Bacterial Nad+-Dependent DNA Ligase Inhibitors
Tetrahedron Lett., 56, 2015
8F9W
DownloadVisualize
BU of 8f9w by Molmil
Crystal structure of Ky15.8 Fab in complex with circumsporozoite protein NPDP peptide
Descriptor: 1,2-ETHANEDIOL, Circumsporozoite protein NPDP peptide, Ky15.8 Antibody, ...
Authors:Thai, E, Prieto, K, Julien, J.P.
Deposit date:2022-11-24
Release date:2023-11-01
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Molecular determinants of cross-reactivity and potency by VH3-33 antibodies against the Plasmodium falciparum circumsporozoite protein.
Cell Rep, 42, 2023
8F9V
DownloadVisualize
BU of 8f9v by Molmil
Crystal structure of Ky15.8 Fab in complex with circumsporozoite protein KQPA peptide
Descriptor: 1,2-ETHANEDIOL, Circumsporozoite protein KQPA peptide, Ky15.8 Antibody, ...
Authors:Thai, E, Prieto, K, Julien, J.P.
Deposit date:2022-11-24
Release date:2023-11-01
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Molecular determinants of cross-reactivity and potency by VH3-33 antibodies against the Plasmodium falciparum circumsporozoite protein.
Cell Rep, 42, 2023
4UCV
DownloadVisualize
BU of 4ucv by Molmil
Fragment bound to H.influenza NAD dependent DNA ligase
Descriptor: 1-(2,4-dimethylbenzyl)-6-oxo-1,6-dihydropyridine-3-carboxamide, 8-methoxy-2,3-dimethylquinoxalin-5-ol, DNA LIGASE
Authors:Hale, M, Brassington, C, Carcanague, D, Embrey, K, Eyermann, C.J, Giacobbe, R.A, Gingipali, L, Gowravaram, M, Harang, J, Howard, T, Ioannidis, G, Jahic, H, Kutschke, A, Laganas, V.A, Loch, J, Miller, M.D, Murphy-Benenato, K.E, Oguto, H, Otterbein, L, Patel, S.J, Shapiro, A.B, Boriack-Sjodin, P.A.
Deposit date:2014-12-04
Release date:2015-10-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:From Fragments to Leads: Novel Bacterial Nad+-Dependent DNA Ligase Inhibitors
Tetrahedron Lett., 56, 2015
7OWE
DownloadVisualize
BU of 7owe by Molmil
Odinarchaeota Adenylate kinase (OdinAK) in complex with inhibitor Ap5a
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE
Authors:Grundstrom, C, Aberg-Zingmark, E, Verma, A, Wolf-Watz, M, Sauer, U.H, Sauer-Eriksson, A.E.
Deposit date:2021-06-18
Release date:2022-09-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Insights into the evolution of enzymatic specificity and catalysis: From Asgard archaea to human adenylate kinases.
Sci Adv, 8, 2022
7OWK
DownloadVisualize
BU of 7owk by Molmil
Odinarchaeota Adenylate kinase (OdinAK) in complex with dTTP
Descriptor: Adenylate kinase, THYMIDINE-5'-TRIPHOSPHATE
Authors:Aberg-Zingmark, E, Grundstrom, C, Verma, A, Wolf-Watz, M, Sauer, U.H, Sauer-Eriksson, A.E.
Deposit date:2021-06-18
Release date:2022-09-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Insights into the evolution of enzymatic specificity and catalysis: From Asgard archaea to human adenylate kinases.
Sci Adv, 8, 2022
8EK5
DownloadVisualize
BU of 8ek5 by Molmil
Engineered scFv 10LH bound to PHOX2B/HLA-A24:02
Descriptor: 10LH single chain fragment variable (scFv), Beta-2-microglobulin, GLYCEROL, ...
Authors:Garfinkle, S.E, Florio, T.J, Sgourakis, N.G.
Deposit date:2022-09-20
Release date:2023-12-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Structural principles of peptide-centric chimeric antigen receptor recognition guide therapeutic expansion.
Sci Immunol, 8, 2023
7OWH
DownloadVisualize
BU of 7owh by Molmil
Odinarchaeota Adenylate kinase (OdinAK) native structure
Descriptor: Adenylate kinase, CHLORIDE ION
Authors:Aberg-Zingmark, E, Grundstrom, C, Verma, A, Wolf-Watz, M, Sauer, U.H, Sauer-Eriksson, A.E.
Deposit date:2021-06-18
Release date:2022-09-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Insights into the evolution of enzymatic specificity and catalysis: From Asgard archaea to human adenylate kinases.
Sci Adv, 8, 2022
4UMV
DownloadVisualize
BU of 4umv by Molmil
CRYSTAL STRUCTURE OF A ZINC-TRANSPORTING PIB-TYPE ATPASE IN THE E2P STATE
Descriptor: BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, ZINC-TRANSPORTING ATPASE
Authors:Wang, K.T, Sitsel, O, Meloni, G, Autzen, H.E, Andersson, M, Klymchuk, T, Nielsen, A.M, Rees, D.C, Nissen, P, Gourdon, P.
Deposit date:2014-05-21
Release date:2014-08-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structure and Mechanism of Zn(2+)-Transporting P-Type Atpases.
Nature, 514, 2014
7ND4
DownloadVisualize
BU of 7nd4 by Molmil
EM structure of SARS-CoV-2 Spike glycoprotein in complex with COVOX-88 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, COVOX-88 Fab heavy chain, ...
Authors:Duyvesteyn, H.M.E, Zhao, Y, Ren, J, Stuart, D.
Deposit date:2021-01-30
Release date:2021-03-03
Last modified:2021-04-28
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:The antigenic anatomy of SARS-CoV-2 receptor binding domain.
Cell, 184, 2021

222415

數據於2024-07-10公開中

PDB statisticsPDBj update infoContact PDBjnumon