Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4AMJ
DownloadVisualize
BU of 4amj by Molmil
Turkey beta1 adrenergic receptor with stabilising mutations and bound biased agonist carvedilol
Descriptor: (2S)-1-(8H-CARBAZOL-4-YLOXY)-3-[2-(2-METHOXYPHENOXY)ETHYLAMINO]PROPAN-2-OL, BETA-1 ADRENERGIC RECEPTOR, HEGA-10, ...
Authors:Warne, T, Edwards, P.C, Leslie, A.G, Tate, C.G.
Deposit date:2012-03-12
Release date:2012-05-23
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structures of a Stabilized Beta1-Adrenoceptor Bound to the Biased Agonists Bucindolol and Carvedilol
Structure, 20, 2012
5SUS
DownloadVisualize
BU of 5sus by Molmil
X-ray crystallographic structure of a covalent trimer derived from A-beta 17_36. X-ray diffractometer data set. (ORN)CVF(MEA)CED(ORN)AIIGL(ORN)V.
Descriptor: 16mer A-beta peptide: ORN-CYS-VAL-PHE-MEA-CYS-GLU-ASP-ORN-ALA-ILE-ILE-GLY-LEU-ORN-VAL, CHLORIDE ION, SODIUM ION
Authors:Kreutzer, A.G, Yoo, S, Nowick, J.S.
Deposit date:2016-08-03
Release date:2017-01-11
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.349 Å)
Cite:Stabilization, Assembly, and Toxicity of Trimers Derived from A beta.
J.Am.Chem.Soc., 139, 2017
6Z58
DownloadVisualize
BU of 6z58 by Molmil
Crystal structure of haspin (GSG2) in complex with macrocycle ODS2003791
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 8,14,18,19,22-pentazatetracyclo[13.5.2.12,6.018,21]tricosa-1(21),2,4,6(23),15(22),16,19-heptaen-7-one, SODIUM ION, ...
Authors:Chaikuad, A, Benderitter, P, Hoflack, J, Denis, A, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2020-05-26
Release date:2020-06-03
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of haspin (GSG2) in complex with macrocycle ODS2003791
To Be Published
6Z8W
DownloadVisualize
BU of 6z8w by Molmil
X-ray structure of the complex between human alpha thrombin and a thrombin binding aptamer variant (TBA-3G), which contains 1-beta-D-glucopyranosyl residue in the side chain of Thy3 at N3.
Descriptor: D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide, POTASSIUM ION, Prothrombin, ...
Authors:Troisi, R, Timofeev, E.N, Sica, F.
Deposit date:2020-06-02
Release date:2021-01-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Expanding the recognition interface of the thrombin-binding aptamer HD1 through modification of residues T3 and T12.
Mol Ther Nucleic Acids, 23, 2021
3V45
DownloadVisualize
BU of 3v45 by Molmil
Crystal Structure of de novo designed serine hydrolase OSH55, Northeast Structural Genomics Consortium Target OR130
Descriptor: CHLORIDE ION, SODIUM ION, Serine hydrolase OSH55
Authors:Kuzin, A, Su, M, Seetharaman, J, Maglaqui, M, Xiao, R, Kohan, E, Rajagopalan, S, Everett, J.K, Nair, R, Acton, T.B, Rost, B, Baker, D, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2011-12-14
Release date:2012-01-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Design of activated serine-containing catalytic triads with atomic-level accuracy.
Nat.Chem.Biol., 10, 2014
6YZS
DownloadVisualize
BU of 6yzs by Molmil
Carborane closo-pentyl-sulfonamide in complex with CA II
Descriptor: Carbonic anhydrase 2, Carborane closo-pentyl-sulfonamide, SODIUM ION, ...
Authors:Kugler, M, Brynda, J, Pospisilova, K, Rezacova, P.
Deposit date:2020-05-07
Release date:2020-10-28
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:The structural basis for the selectivity of sulfonamido dicarbaboranes toward cancer-associated carbonic anhydrase IX.
J Enzyme Inhib Med Chem, 35, 2020
6ZDE
DownloadVisualize
BU of 6zde by Molmil
17beta-hydroxysteroid dehydrogenase type 14 variant S205 in complex with pentafluorophenol
Descriptor: 17-beta-hydroxysteroid dehydrogenase 14, 2,3,4,5,6-pentakis(fluoranyl)phenol, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Badran, M.J, Heine, A, Klebe, G.
Deposit date:2020-06-14
Release date:2021-01-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:17beta-hydroxysteroid dehydrogenase type 14 variant S205 in complex with pentafluorophenol
To Be Published
6ZDI
DownloadVisualize
BU of 6zdi by Molmil
17beta-hydroxysteroid dehydrogenase type 14 variant S205 in complex with 2-fluoro-5-nitrophenol
Descriptor: 17-beta-hydroxysteroid dehydrogenase 14, 2-fluoranyl-5-nitro-phenol, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Badran, M.J, Heine, A, Klebe, G.
Deposit date:2020-06-14
Release date:2021-01-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:17beta-hydroxysteroid dehydrogenase type 14 variant S205 in complex with 2-fluoro-5-nitrophenol
To Be Published
5UOS
DownloadVisualize
BU of 5uos by Molmil
Crystal Structure of CblC (MMACHC) (1-238), a human B12 processing enzyme, complexed with an Antivitamin B12
Descriptor: 1-ethynyl-2,4-difluorobenzene, 2-PHENYLAMINO-ETHANESULFONIC ACID, COBALAMIN, ...
Authors:Shanmuganathan, A, Karasik, A, Ruetz, M, Banerjee, R, Krautler, B, Koutmos, M.
Deposit date:2017-02-01
Release date:2017-06-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Antivitamin B12 Inhibition of the Human B12 -Processing Enzyme CblC: Crystal Structure of an Inactive Ternary Complex with Glutathione as the Cosubstrate.
Angew. Chem. Int. Ed. Engl., 56, 2017
6Z50
DownloadVisualize
BU of 6z50 by Molmil
Crystal structure of CLK1 in complex with macrocycle ODS2003208
Descriptor: 1,2-ETHANEDIOL, 11,15-dimethyl-6-(oxan-4-yloxy)-8-oxa-2,11,15,19,21,23-hexazatetracyclo[15.6.1.13,7.020,24]pentacosa-1(23),3(25),4,6,17,20(24),21-heptaen-10-one, Dual specificity protein kinase CLK1, ...
Authors:Chaikuad, A, Benderitter, P, Hoflack, J, Denis, A, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2020-05-26
Release date:2020-06-03
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of CLK1 in complex with macrocycle ODS2003208
To Be Published
5USV
DownloadVisualize
BU of 5usv by Molmil
Insulin with proline analog AzeP at position B28 in the T2 state
Descriptor: Insulin Chain A, Insulin Chain B, SODIUM ION
Authors:Lieblich, S.A, Fang, K.Y, Tirrell, D.A.
Deposit date:2017-02-14
Release date:2018-02-21
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Insulin with proline analog AzeP at position B28 in the T2 state
To Be Published
3V31
DownloadVisualize
BU of 3v31 by Molmil
Crystal Structure of the Peptide Bound Complex of the Ankyrin Repeat Domains of Human ANKRA2
Descriptor: Ankyrin repeat family A protein 2, CHLORIDE ION, Histone deacetylase 4, ...
Authors:Lam, R, Xu, C, Bian, C.B, Kania, J, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2011-12-12
Release date:2012-04-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Sequence-Specific Recognition of a PxLPxI/L Motif by an Ankyrin Repeat Tumbler Lock.
Sci.Signal., 5, 2012
7RCP
DownloadVisualize
BU of 7rcp by Molmil
GltPh mutant (S279E/D405N) in complex with aspartate and sodium ions
Descriptor: ASPARTIC ACID, Glutamate transporter homolog, SODIUM ION
Authors:Reddy, K.D, Boudker, O.
Deposit date:2021-07-07
Release date:2022-04-20
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.2 Å)
Cite:The archaeal glutamate transporter homologue GltPh shows heterogeneous substrate binding.
J.Gen.Physiol., 154, 2022
5V4H
DownloadVisualize
BU of 5v4h by Molmil
Ruthenium(II)(cymene)(chlorido)2-lysozyme adduct formed when ruthenium(II)(cymene)(bromido)2 underwent ligand exchange, resulting in one binding site
Descriptor: Lysozyme C, PARA-CYMENE RUTHENIUM CHLORIDE, SODIUM ION
Authors:Sullivan, M.P, Hartinger, C.G, Goldstone, D.C.
Deposit date:2017-03-09
Release date:2017-04-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:The metalation of hen egg white lysozyme impacts protein stability as shown by ion mobility mass spectrometry, differential scanning calorimetry, and X-ray crystallography.
Chem. Commun. (Camb.), 53, 2017
5SWM
DownloadVisualize
BU of 5swm by Molmil
BACILLUS HALODURANS RNASE H MUTANT D132N IN COMPLEX WITH 12-MER FRNA/DNA HYBRID
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, DNA (12-MER), ...
Authors:Pallan, P.S, Egli, M.
Deposit date:2016-08-08
Release date:2016-09-21
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Limits of RNA 2'-OH Mimicry by Fluorine: Crystal Structure of Bacillus halodurans RNase H Bound to a 2'-FRNA:DNA Hybrid.
Biochemistry, 55, 2016
5WRB
DownloadVisualize
BU of 5wrb by Molmil
Crystal structure of hen egg-white lysozyme
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION
Authors:Sugahara, M, Suzuki, M, Masuda, T, Inoue, S, Nango, E.
Deposit date:2016-12-01
Release date:2017-12-20
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.013 Å)
Cite:Hydroxyethyl cellulose matrix applied to serial crystallography
Sci Rep, 7, 2017
4A60
DownloadVisualize
BU of 4a60 by Molmil
Crystal structure of human testis-specific fatty acid binding protein 9 (FABP9)
Descriptor: 1,2-ETHANEDIOL, FATTY ACID-BINDING PROTEIN 9 TESTIS LIPID-BINDING PROTEIN, TLBP, ...
Authors:Muniz, J.R.C, Kiyani, W, Shrestha, L, Froese, D.S, Krojer, T, Vollmar, M, Arrowsmith, C.H, Edwards, A.M, Weigelt, J, Bountra, C, von Delft, F, Yue, W.W.
Deposit date:2011-10-31
Release date:2011-11-09
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:The Crystal Structure of the Human Fabp9A
To be Published
5WHA
DownloadVisualize
BU of 5wha by Molmil
KRas G12V, bound to GDP and miniprotein 225-11
Descriptor: CALCIUM ION, GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Shim, S.Y, McGee, J.H, Lee, S.-J, Verdine, G.L.
Deposit date:2017-07-16
Release date:2018-01-03
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Exceptionally high-affinity Ras binders that remodel its effector domain.
J. Biol. Chem., 293, 2018
4AE4
DownloadVisualize
BU of 4ae4 by Molmil
The UBAP1 subunit of ESCRT-I interacts with ubiquitin via a novel SOUBA domain
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, GLYCEROL, POTASSIUM ION, ...
Authors:Agromayor, M, Soler, N, Caballe, A, Kueck, T, Freund, S.M, Allen, M.D, Bycroft, M, Perisic, O, Ye, Y, McDonald, B, Scheel, H, Hofmann, K, Neil, S.J.D, Martin-Serrano, J, Williams, R.L.
Deposit date:2012-01-06
Release date:2012-03-21
Last modified:2018-02-28
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:The UBAP1 subunit of ESCRT-I interacts with ubiquitin via a SOUBA domain.
Structure, 20, 2012
5VZ8
DownloadVisualize
BU of 5vz8 by Molmil
Post-catalytic complex of human Polymerase Mu (G433A) mutant with incoming UTP
Descriptor: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DNA (5'-D(*CP*GP*GP*CP*AP*TP*AP*CP*G)-3'), ...
Authors:Moon, A.F, Pryor, J.M, Ramsden, D.A, Kunkel, T.A, Bebenek, K, Pedersen, L.C.
Deposit date:2017-05-27
Release date:2017-07-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.601 Å)
Cite:Structural accommodation of ribonucleotide incorporation by the DNA repair enzyme polymerase Mu.
Nucleic Acids Res., 45, 2017
5VZE
DownloadVisualize
BU of 5vze by Molmil
Post-catalytic complex of human Polymerase Mu (W434A) mutant with incoming UTP
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DNA (5'-D(*CP*GP*GP*CP*AP*TP*AP*CP*G)-3'), ...
Authors:Moon, A.F, Pryor, J.M, Ramsden, D.A, Kunkel, T.A, Bebenek, K, Pedersen, L.C.
Deposit date:2017-05-27
Release date:2017-07-05
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.506 Å)
Cite:Structural accommodation of ribonucleotide incorporation by the DNA repair enzyme polymerase Mu.
Nucleic Acids Res., 45, 2017
5T3R
DownloadVisualize
BU of 5t3r by Molmil
Crystal structure of BT1762-1763
Descriptor: MAGNESIUM ION, SODIUM ION, SusC homolog, ...
Authors:van den Berg, B.
Deposit date:2016-08-26
Release date:2016-12-14
Last modified:2019-10-16
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural basis for nutrient acquisition by dominant members of the human gut microbiota.
Nature, 541, 2017
5V5H
DownloadVisualize
BU of 5v5h by Molmil
OTU protease of Crimean Congo Hemorrhagic Fever Virus bound to ubiquitin variant CC.2
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, RNA-directed RNA polymerase L, SODIUM ION, ...
Authors:Khare, B, Mark, B.L.
Deposit date:2017-03-14
Release date:2017-05-10
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Potent and selective inhibition of pathogenic viruses by engineered ubiquitin variants.
PLoS Pathog., 13, 2017
5W6H
DownloadVisualize
BU of 5w6h by Molmil
Crystal structure of Bacteriophage CBA120 tailspike protein 4 enzymatically active domain (TSP4dN, orf213)
Descriptor: ACETATE ION, CHLORIDE ION, POTASSIUM ION, ...
Authors:Plattner, M, Shneider, M.M, Leiman, P.G.
Deposit date:2017-06-16
Release date:2018-10-24
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.289 Å)
Cite:Structure and Function of the Branched Receptor-Binding Complex of Bacteriophage CBA120.
J.Mol.Biol., 431, 2019
5VB3
DownloadVisualize
BU of 5vb3 by Molmil
X-ray structure of nuclear receptor ROR-gammat Ligand Binding Domain + SRC2 peptide
Descriptor: Nuclear receptor ROR-gamma, SRC2 chimera, SODIUM ION
Authors:Li, X.
Deposit date:2017-03-28
Release date:2017-06-07
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural studies unravel the active conformation of apo ROR gamma t nuclear receptor and a common inverse agonism of two diverse classes of ROR gamma t inhibitors.
J. Biol. Chem., 292, 2017

222415

數據於2024-07-10公開中

PDB statisticsPDBj update infoContact PDBjnumon