Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 660 results

8WWR
DownloadVisualize
BU of 8wwr by Molmil
Crystal structure of apo human dishevelled 2 (Dvl2) PDZ domain
Descriptor: Segment polarity protein dishevelled homolog DVL-2
Authors:Omble, A, Mahajan, S, Kulkarni, K.A.
Deposit date:2023-10-26
Release date:2024-05-29
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Dishevelled2 activates WGEF via its interaction with a unique internal peptide motif of the GEF.
Commun Biol, 7, 2024
3DJ3
DownloadVisualize
BU of 3dj3 by Molmil
Crystal Structure of C-terminal Truncated TIP-1 (6-113)
Descriptor: Tax1-binding protein 3
Authors:Shen, Y.
Deposit date:2008-06-21
Release date:2008-10-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Basis of beta-Catenin Recognition by Tax-interacting Protein-1
J.Mol.Biol., 384, 2008
5I7Z
DownloadVisualize
BU of 5i7z by Molmil
Crystal structure of a Par-6 PDZ-Crumbs 3 C-terminal peptide complex
Descriptor: Crb-3, DI(HYDROXYETHYL)ETHER, LD29223p
Authors:Whitney, D.S, Peterson, F.C, Prehoda, K.E, Volkman, B.F.
Deposit date:2016-02-18
Release date:2016-03-16
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.801 Å)
Cite:Binding of Crumbs to the Par-6 CRIB-PDZ Module Is Regulated by Cdc42.
Biochemistry, 55, 2016
3DIW
DownloadVisualize
BU of 3diw by Molmil
c-terminal beta-catenin bound TIP-1 structure
Descriptor: Tax1-binding protein 3, decameric peptide form Catenin beta-1
Authors:Shen, Y.
Deposit date:2008-06-21
Release date:2008-10-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Basis of beta-Catenin Recognition by Tax-interacting Protein-1
J.Mol.Biol., 384, 2008
5IC3
DownloadVisualize
BU of 5ic3 by Molmil
CAL PDZ domain with peptide and inhibitor
Descriptor: 4-[methyl(nitroso)amino]benzene-1,2-diol, Golgi-associated PDZ and coiled-coil motif-containing protein, HPV18E6 Peptide
Authors:Zhao, Y, Madden, D.R.
Deposit date:2016-02-22
Release date:2017-08-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:CAL PDZ domain with peptide and inhibitor
To Be Published
8GI4
DownloadVisualize
BU of 8gi4 by Molmil
Crystal structure of human LIMK2 PDZ domain
Descriptor: LIM domain kinase 2
Authors:Casanova Sepulveda, G, Boggon, T.J.
Deposit date:2023-03-13
Release date:2023-12-06
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Autoregulation of the LIM kinases by their PDZ domain.
Nat Commun, 14, 2023
8HCK
DownloadVisualize
BU of 8hck by Molmil
NMR fragment-based screening against the two PDZ do-mains of MDA-9
Descriptor: 4-BUTYL-1,2-DIPHENYL-PYRAZOLIDINE-3,5-DIONE, GLYCEROL, SULFATE ION, ...
Authors:Tang, H.
Deposit date:2022-11-01
Release date:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:NMR fragment-based screening against the two PDZ do-mains of MDA-9
To Be Published
8HU2
DownloadVisualize
BU of 8hu2 by Molmil
Rattus Syntenin-1 PDZ domain with inhibitor
Descriptor: (2~{S})-2-(9~{H}-fluoren-9-ylmethoxycarbonylamino)-3-(4-oxidanylidene-5~{H}-pyrimidin-2-yl)propanoic acid, Syntenin-1
Authors:Heo, Y, Lee, J, Yun, J.H, Lee, W.
Deposit date:2022-12-22
Release date:2024-01-17
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of STNPDZ with inhibitor at 1.60 Angstroms resolution.
To Be Published
4E34
DownloadVisualize
BU of 4e34 by Molmil
Crystal structure of CFTR Associated Ligand (CAL) PDZ domain bound to iCAL36 (ANSRWPTSII) peptide
Descriptor: GLYCEROL, Golgi-associated PDZ and coiled-coil motif-containing protein, decameric peptide, ...
Authors:Amacher, J.F, Beck, T, Madden, D.R.
Deposit date:2012-03-09
Release date:2012-12-26
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.395 Å)
Cite:Stereochemical Determinants of C-terminal Specificity in PDZ Peptide-binding Domains: A NOVEL CONTRIBUTION OF THE CARBOXYLATE-BINDING LOOP.
J.Biol.Chem., 288, 2013
4E3B
DownloadVisualize
BU of 4e3b by Molmil
Crystal structure of Tax-Interacting Protein-1 (TIP-1) PDZ domain bound to iCAL36-L (ANSRWPTSIL) peptide
Descriptor: Tax1-binding protein 3, iCAL50 peptide
Authors:Amacher, J.F, Madden, D.R.
Deposit date:2012-03-09
Release date:2012-12-26
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Stereochemical Determinants of C-terminal Specificity in PDZ Peptide-binding Domains: A NOVEL CONTRIBUTION OF THE CARBOXYLATE-BINDING LOOP.
J.Biol.Chem., 288, 2013
5ZDS
DownloadVisualize
BU of 5zds by Molmil
Crystal structure of the second PDZ domain of Frmpd2
Descriptor: FERM and PDZ domain-containing 2
Authors:Lu, X, Wang, X.F.
Deposit date:2018-02-24
Release date:2019-02-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The second PDZ domain of scaffold protein Frmpd2 binds to GluN2A of NMDA receptors.
Biochem.Biophys.Res.Commun., 516, 2019
1D5G
DownloadVisualize
BU of 1d5g by Molmil
SOLUTION STRUCTURE OF THE PDZ2 DOMAIN FROM HUMAN PHOSPHATASE HPTP1E COMPLEXED WITH A PEPTIDE
Descriptor: HUMAN PHOSPHATASE HPTP1E, PEPTIDE FADSEADENEQVSAV
Authors:Kozlov, G, Gehring, K, Ekiel, I.
Deposit date:1999-10-07
Release date:2002-07-24
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution Structure of the PDZ2 Domain from Cytosolic Human Phosphatase hPTP1E Complexed with a Peptide Reveals Contribution of the beta2-beta3 Loop to PDZ Domain-Ligand Interactions
J.Mol.Biol., 320, 2002
5ZYS
DownloadVisualize
BU of 5zys by Molmil
Structure of Nephrin/MAGI1 complex
Descriptor: Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1, Nephrin
Authors:Weng, Z.F, Shng, Y, Zhu, J.W, Zhang, R.G.
Deposit date:2018-05-28
Release date:2019-01-23
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Structural Basis of Highly Specific Interaction between Nephrin and MAGI1 in Slit Diaphragm Assembly and Signaling.
J. Am. Soc. Nephrol., 29, 2018
4E35
DownloadVisualize
BU of 4e35 by Molmil
Crystal structure of CFTR Associated Ligand (CAL) PDZ domain bound to iCAL36-L (ANSRWPTSIL) peptide
Descriptor: GLYCEROL, Golgi-associated PDZ and coiled-coil motif-containing protein, iCAL50 peptide
Authors:Amacher, J.F, Madden, D.R.
Deposit date:2012-03-09
Release date:2012-12-26
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Stereochemical Determinants of C-terminal Specificity in PDZ Peptide-binding Domains: A NOVEL CONTRIBUTION OF THE CARBOXYLATE-BINDING LOOP.
J.Biol.Chem., 288, 2013
1B8Q
DownloadVisualize
BU of 1b8q by Molmil
SOLUTION STRUCTURE OF THE EXTENDED NEURONAL NITRIC OXIDE SYNTHASE PDZ DOMAIN COMPLEXED WITH AN ASSOCIATED PEPTIDE
Descriptor: PROTEIN (HEPTAPEPTIDE), PROTEIN (NEURONAL NITRIC OXIDE SYNTHASE)
Authors:Tochio, H, Zhang, Q, Mandal, P, Li, M, Zhang, M.
Deposit date:1999-02-01
Release date:1999-04-29
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of the extended neuronal nitric oxide synthase PDZ domain complexed with an associated peptide.
Nat.Struct.Biol., 6, 1999
1BFE
DownloadVisualize
BU of 1bfe by Molmil
THE THIRD PDZ DOMAIN FROM THE SYNAPTIC PROTEIN PSD-95
Descriptor: PSD-95
Authors:Doyle, D.A, Lee, A, Lewis, J, Kim, E, Sheng, M, Mackinnon, R.
Deposit date:1998-05-20
Release date:1998-10-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structures of a complexed and peptide-free membrane protein-binding domain: molecular basis of peptide recognition by PDZ.
Cell(Cambridge,Mass.), 85, 1996
1BE9
DownloadVisualize
BU of 1be9 by Molmil
THE THIRD PDZ DOMAIN FROM THE SYNAPTIC PROTEIN PSD-95 IN COMPLEX WITH A C-TERMINAL PEPTIDE DERIVED FROM CRIPT.
Descriptor: CRIPT, PSD-95
Authors:Doyle, D.A, Lee, A, Lewis, J, Kim, E, Sheng, M, Mackinnon, R.
Deposit date:1998-05-20
Release date:1998-10-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Crystal structures of a complexed and peptide-free membrane protein-binding domain: molecular basis of peptide recognition by PDZ.
Cell(Cambridge,Mass.), 85, 1996
4F8K
DownloadVisualize
BU of 4f8k by Molmil
Molecular analysis of the interaction between the prostacyclin receptor and the first PDZ domain of PDZK1
Descriptor: Na(+)/H(+) exchange regulatory cofactor NHE-RF3, Prostacyclin receptor
Authors:Kocher, O, Birrane, G, Kinsella, B.T, Mulvaney, E.P.
Deposit date:2012-05-17
Release date:2013-02-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Molecular Analysis of the Prostacyclin Receptor's Interaction with the PDZ1 Domain of Its Adaptor Protein PDZK1.
Plos One, 8, 2013
3LNY
DownloadVisualize
BU of 3lny by Molmil
Second PDZ domain from human PTP1E in complex with RA-GEF2 peptide
Descriptor: Rap guanine nucleotide exchange factor 6, SULFATE ION, THIOCYANATE ION, ...
Authors:Zhang, J, Chang, A, Ke, H, Phillips Jr, G.N, Lee, A.L, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2010-02-03
Release date:2010-03-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystallographic and nuclear magnetic resonance evaluation of the impact of peptide binding to the second PDZ domain of protein tyrosine phosphatase 1E.
Biochemistry, 49, 2010
6AK2
DownloadVisualize
BU of 6ak2 by Molmil
Crystal structure of the syntenin PDZ1 domain in complex with the peptide inhibitor KSL-128018
Descriptor: Syntenin-1, peptide inhibitor KSL-128018
Authors:Jin, Z.Y, Park, J.H, Yun, J.H, Haugaard-Kedstrom, L.M, Lee, W.T.
Deposit date:2018-08-29
Release date:2019-09-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.868 Å)
Cite:A High-Affinity Peptide Ligand Targeting Syntenin Inhibits Glioblastoma.
J.Med.Chem., 64, 2021
8CQY
DownloadVisualize
BU of 8cqy by Molmil
Crystal structure of the PTPN3 PDZ domain bound to the PBM TACE C-terminal peptide
Descriptor: Disintegrin and metalloproteinase domain-containing protein 17, SODIUM ION, Tyrosine-protein phosphatase non-receptor type 3
Authors:Genera, M, Colcombet-Cazenave, B, Croitoru, A, Raynal, B, Mechaly, A, Caillet, J, Haouz, A, Wolff, N, Caillet-Saguy, C.
Deposit date:2023-03-07
Release date:2023-05-10
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Interactions of the protein tyrosine phosphatase PTPN3 with viral and cellular partners through its PDZ domain: insights into structural determinants and phosphatase activity.
Front Mol Biosci, 10, 2023
2G5M
DownloadVisualize
BU of 2g5m by Molmil
Spinophilin PDZ domain
Descriptor: Neurabin-2
Authors:Kelker, M.S, Peti, W.
Deposit date:2006-02-23
Release date:2007-01-09
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structural basis for spinophilin-neurabin receptor interaction.
Biochemistry, 46, 2007
8CN1
DownloadVisualize
BU of 8cn1 by Molmil
hDLG1-PDZ1 in complex with a TAX1 peptide from HTLV-1
Descriptor: Disks large homolog 1, GLU-THR-GLU-VAL, SULFATE ION
Authors:Maseko, S, Sogues, A, Volkov, A, Remaut, H, Twizere, J.C.
Deposit date:2023-02-21
Release date:2023-08-02
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Identification of small molecule antivirals against HTLV-1 by targeting the hDLG1-Tax-1 protein-protein interaction.
Antiviral Res., 217, 2023
8CN3
DownloadVisualize
BU of 8cn3 by Molmil
hDLG1-PDZ2 in complex with a TAX1 peptide from HTLV-1
Descriptor: Disks large homolog 1, GLU-THR-GLU-VAL
Authors:Maseko, S, Sogues, A, Volkov, A, Remaut, H, Twizere, J.C.
Deposit date:2023-02-21
Release date:2023-08-02
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Identification of small molecule antivirals against HTLV-1 by targeting the hDLG1-Tax-1 protein-protein interaction.
Antiviral Res., 217, 2023
2G2L
DownloadVisualize
BU of 2g2l by Molmil
Crystal Structure of the Second PDZ Domain of SAP97 in Complex with a GluR-A C-terminal Peptide
Descriptor: 18-mer peptide from glutamate receptor, ionotropic, AMPA1, ...
Authors:Von Ossowski, I, Oksanen, E, Von Ossowski, L, Cai, C, Sundberg, M, Goldman, A, Keinanen, K.
Deposit date:2006-02-16
Release date:2006-08-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structure of the second PDZ domain of SAP97 in complex with a GluR-A C-terminal peptide
Febs J., 273, 2006

222624

數據於2024-07-17公開中

PDB statisticsPDBj update infoContact PDBjnumon