PDB: 242842 resultsInfo pagesStatus searchChemie searchBIRD

---

6SY4	TetR in complex with the TetR-binding RNA-aptamer K1 Descriptor: TetR-binding aptamer K1 (43-MER), Tetracycline repressor protein class B from transposon Tn10 Authors: Grau, F.C, Muller, Y.A, Suess, B, Groher, F, Jaeger, J. Deposit date: 2019-09-27 Release date: 2020-02-05 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (2.695 Å) Cite: The complex formed between a synthetic RNA aptamer and the transcription repressor TetR is a structural and functional twin of the operator DNA-TetR regulator complex. Nucleic Acids Res., 48, 2020
8VEZ	De novo design apixaban-binding protein: apx1049 Descriptor: 1-(4-METHOXYPHENYL)-7-OXO-6-[4-(2-OXOPIPERIDIN-1-YL)PHENYL]-4,5,6,7-TETRAHYDRO-1H-PYRAZOLO[3,4-C]PYRIDINE-3-CARBOXAMIDE, De novo design apixaban-binding protein: apx1049 Authors: Bera, A.K, Lee, G.R, Baker, D. Deposit date: 2023-12-20 Release date: 2025-01-15 Method: X-RAY DIFFRACTION (2.15 Å) Cite: Small-molecule binding and sensing with a designed protein family To Be Published
6SYM	Crystal structure of Escherichia coli MsrB (reduced form) Descriptor: Peptide methionine sulfoxide reductase MsrB, ZINC ION Authors: Napolitano, S, Zyla, D, Glockshuber, R. Deposit date: 2019-09-30 Release date: 2020-10-14 Last modified: 2024-11-06 Method: X-RAY DIFFRACTION (1.6302 Å) Cite: Structure of Peptide methionine sulfoxide reductase MsrB at 1.63 Angstrom resolution To Be Published
8VH0	Vanadate-bound Vanadium-dependent Bromoperoxidase from Corallina pilulifera Descriptor: CALCIUM ION, VANADATE ION, Vanadium-dependent bromoperoxidase Authors: Hessefort, L.Z, Williams, D.R, Biegasiewicz, K.F. Deposit date: 2023-12-30 Release date: 2025-01-15 Method: ELECTRON MICROSCOPY (2.3 Å) Cite: High-Resolution CryoEM unveils insights into the Catalytic Mechanism of a Vanadium-dependent Bromoperoxidase To be published
8VJQ	Bromide-bound Vanadium-dependent Bromoperoxidase from Corallina pilulifera Descriptor: BROMIDE ION, CALCIUM ION, VANADATE ION, ... Authors: Hessefort, L.Z, Williams, D.R, Biegasiewicz, K.F. Deposit date: 2024-01-07 Release date: 2025-01-15 Method: ELECTRON MICROSCOPY (3.2 Å) Cite: High-Resolution CryoEM unveils insights into the Catalytic Mechanism of a Vanadium-dependent Bromoperoxidase To be published
6SPT	High resolution crystal structure of N-terminal domain of PEX14 from Trypanosoma brucei in complex with the fist compound with sub-micromolar trypanocidal activity Descriptor: 5-[(4-methoxynaphthalen-1-yl)methyl]-1-[2-[(2-methyl-1-oxidanyl-propan-2-yl)amino]ethyl]-~{N}-(naphthalen-1-ylmethyl)-6,7-dihydro-4~{H}-pyrazolo[4,3-c]pyridine-3-carboxamide, BETA-MERCAPTOETHANOL, CHLORIDE ION, ... Authors: Napolitano, V, Dawidowski, M, Kalel, V.C, Fino, R, Emmanouilidis, L, Lenhart, D, Ostertag, M, Kaiser, M, Kolonko, M, Schilebs, W, Maser, P, Tetko, I, Hadian, K, Plettenburg, O, Erdmann, R, Sattler, M, Popowicz, G.M, Dubin, G. Deposit date: 2019-09-02 Release date: 2020-01-01 Last modified: 2025-04-09 Method: X-RAY DIFFRACTION (1.2 Å) Cite: Structure-Activity Relationship in Pyrazolo[4,3-c]pyridines, First Inhibitors of PEX14-PEX5 Protein-Protein Interaction with Trypanocidal Activity. J.Med.Chem., 63, 2020
5WI8	Crystal structure of murine 4-1BB from HEK293T cells in P21 space group Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ... Authors: Zajonc, D.M, Bitra, A. Deposit date: 2017-07-18 Release date: 2017-12-20 Last modified: 2024-10-16 Method: X-RAY DIFFRACTION (2.95 Å) Cite: Crystal structure of murine 4-1BB and its interaction with 4-1BBL support a role for galectin-9 in 4-1BB signaling. J. Biol. Chem., 293, 2018
8VMJ	H3K4me3 nucleosome bound to PRC2_AJ119-450 Descriptor: DNA (157-MER), Histone H2A, Histone H2B, ... Authors: Cookis, T, Nogales, E. Deposit date: 2024-01-13 Release date: 2025-01-15 Last modified: 2025-03-05 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Structural basis for the inhibition of PRC2 by active transcription histone posttranslational modifications. Nat.Struct.Mol.Biol., 32, 2025
8VLW	TolQ-TolR inner membrane protein complex from Acinetobacter baumannii Descriptor: Tol-Pal system protein TolQ, Tol-Pal system protein TolR Authors: Guo, Y, Borek, D, Center for Structural Biology of Infectious Diseases (CSBID) Deposit date: 2024-01-12 Release date: 2025-01-15 Last modified: 2025-01-22 Method: ELECTRON MICROSCOPY (3.34 Å) Cite: Structural architecture of TolQ-TolR inner membrane protein complex from opportunistic pathogen Acinetobacter baumannii. Biorxiv, 2024
8VO8	Cryo-EM structure of fascin crosslinked F-actin (Eigen_left) Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ... Authors: Gong, R, Reynolds, M.J, Alushin, G.M. Deposit date: 2024-01-14 Release date: 2025-01-15 Last modified: 2025-05-28 Method: ELECTRON MICROSCOPY (3.9 Å) Cite: Fascin structural plasticity mediates flexible actin bundle construction. Nat.Struct.Mol.Biol., 32, 2025
4MQC	Carbonmonoxy Structure of Hemoglobin Evans alphaV62Mbetawt Descriptor: CARBON MONOXIDE, Hemoglobin subunit alpha, Hemoglobin subunit beta, ... Authors: Soman, J, Olson, J.S. Deposit date: 2013-09-16 Release date: 2013-10-02 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Carbonmonoxy Structure of Hemoglobin Evans alphaV62Mbetawt To be Published
8VNX	A structural study of selectivity mechanisms for JNK3 and p38 alpha with indazole scaffold probing compounds Descriptor: (4P)-4-[5-(2-chloro-6-fluoroanilino)-6-(methoxymethyl)-1H-indazol-1-yl]-N-methylthiophene-2-carboxamide, Mitogen-activated protein kinase 10 Authors: Park, H, Feng, Y. Deposit date: 2024-01-13 Release date: 2025-01-15 Method: X-RAY DIFFRACTION (2 Å) Cite: A structural study of selectivity mechanisms for JNK3 and p38 alpha with indazole scaffold probing compounds To Be Published
8VO6	Cryo-EM structure of fascin bound to F-actin (actin binding site 2) Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ... Authors: Gong, R, Reynolds, M.J, Alushin, G.M. Deposit date: 2024-01-14 Release date: 2025-01-15 Last modified: 2025-05-28 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Fascin structural plasticity mediates flexible actin bundle construction. Nat.Struct.Mol.Biol., 32, 2025
4MJL	Crystal Structure of myo-inositol dehydrogenase from Lactobacillus casei in complex with NAD and D-chiro-inositol Descriptor: (1R,2R,3S,4S,5S,6S)-CYCLOHEXANE-1,2,3,4,5,6-HEXOL, GLYCEROL, Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase, ... Authors: Bertwistle, D, Sanders, D.A.R, Palmer, D.R.J. Deposit date: 2013-09-03 Release date: 2015-03-04 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Crystal Structure of myo-inositol dehydrogenase from Lactobacillus casei in complex with NAD and D-chiro-inositol To be Published
8VOA	Cryo-EM structure of fascin crosslinked F-actin (Eigen_right) Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ... Authors: Gong, R, Reynolds, M.J, Alushin, G.M. Deposit date: 2024-01-14 Release date: 2025-01-15 Last modified: 2025-05-28 Method: ELECTRON MICROSCOPY (4 Å) Cite: Fascin structural plasticity mediates flexible actin bundle construction. Nat.Struct.Mol.Biol., 32, 2025
8VQG	X-ray crystal structure of Can f 1 Descriptor: MALONATE ION, Major allergen Can f 1 Authors: Khatri, K, Geoffrey, M.A, Pedersen, L.C, Champan, M.D, Pomes, A, Chruszcz, M. Deposit date: 2024-01-18 Release date: 2025-01-22 Last modified: 2025-09-03 Method: X-RAY DIFFRACTION (2.55 Å) Cite: Human IgE monoclonal antibodies define two unusual epitopes trapping dog allergen Can f 1 in different conformations. Protein Sci., 34, 2025
8VWA	CryoEM Structure of a FtsH Helical Assembly in the Presence of ATP Descriptor: ADENOSINE-5'-TRIPHOSPHATE, ATP-dependent zinc metalloprotease FtsH, MAGNESIUM ION, ... Authors: Li, Y, Zhu, J, Zhang, Z, Wang, F, Egelman, E.H, Tezcan, F.A. Deposit date: 2024-01-31 Release date: 2025-01-15 Last modified: 2025-06-11 Method: ELECTRON MICROSCOPY (2.5 Å) Cite: Transforming an ATP-dependent enzyme into a dissipative, self-assembling system. Nat.Chem.Biol., 21, 2025
8W3M	Crystal Structure of Enterovirus 68 3C Protease with AG7404 at 1.97 Angstroms Descriptor: Peptidase C3, SODIUM ION, ethyl (4R)-4-({(2S)-2-[3-{[(5-methyl-1,2-oxazol-3-yl)carbonyl]amino}-2-oxopyridin-1(2H)-yl]pent-4-ynoyl}amino)-5-[(3S)-2-oxopyrrolidin-3-yl]pentanoate Authors: Azzolino, V.N, Shaqra, A.M, Schiffer, C.A. Deposit date: 2024-02-22 Release date: 2025-01-15 Last modified: 2025-02-05 Method: X-RAY DIFFRACTION (1.97 Å) Cite: Structural Analysis of Inhibitor Binding to Enterovirus-D68 3C Protease. Viruses, 17, 2025
8VJ9	CryoEM structure of human ACKR3 phosphorylated by GRK5 in complex with Arrestin3 variant with the C edge loop from Arrestin2 inserted Descriptor: Atypical chemokine receptor 3, Beta-arrestin-2, Fab7 heavy chain, ... Authors: Chen, Q, Tesmer, J.J.G. Deposit date: 2024-01-06 Release date: 2025-01-22 Last modified: 2025-07-09 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: Effect of phosphorylation barcodes on arrestin binding to a chemokine receptor. Nature, 643, 2025
8VUK	The crystal structure of Brucella abortus FtrB at 1.3 Angstrom resolution Descriptor: EfeO-type cupredoxin-like domain-containing protein, MANGANESE (II) ION Authors: Roy, S, Garcia, B.L. Deposit date: 2024-01-29 Release date: 2025-01-22 Last modified: 2025-08-06 Method: X-RAY DIFFRACTION (1.3 Å) Cite: In Vitro Structural and Functional Studies of a Novel Cupredoxin, FtrB, from Brucella abortus 2308. Acs Omega, 10, 2025
8VVX	Human Aquaporin 2 from 2D electron diffraction data Descriptor: Aquaporin-2 Authors: Vahedi-Faridi, A, Lodowski, D.T, Engel, A, Transcontinental EM Initiative for Membrane Protein Structure (TEMIMPS) Deposit date: 2024-01-31 Release date: 2025-02-05 Method: ELECTRON CRYSTALLOGRAPHY (2.6 Å) Cite: Human Aquaporin 2 from 2D electron diffraction data To Be Published
8VH6	[F:3Au+:F] Metal-mediated DNA base pair with 2-thio-thymidine in tensegrity triangle Descriptor: DNA (5'-D(*GP*AP*GP*CP*AP*GP*CP*CP*TP*GP*TP*(2SV)P*TP*GP*GP*AP*CP*AP*TP*CP*A)-3'), DNA (5'-D(P*CP*CP*AP*(2SV)P*AP*CP*A)-3'), DNA (5'-D(P*CP*TP*GP*AP*TP*GP*T)-3'), ... Authors: Vecchioni, S, Lu, B. Deposit date: 2023-12-31 Release date: 2025-01-15 Method: X-RAY DIFFRACTION (5.86 Å) Cite: Metal-mediated 2-thio-thymidine DNA base pairs To Be Published
4MM3	Crystal structure of SARS-CoV papain-like protease PLpro in complex with ubiquitin aldehyde Descriptor: Papain-like proteinase, Ubiquitin, ZINC ION Authors: Mesecar, A.D, Ratia, K. Deposit date: 2013-09-08 Release date: 2014-07-02 Last modified: 2025-03-26 Method: X-RAY DIFFRACTION (2.752 Å) Cite: Structural Basis for the Ubiquitin-Linkage Specificity and deISGylating activity of SARS-CoV papain-like protease. Plos Pathog., 10, 2014
8VHZ	Cryo EM structure of a soybean CesA1 homotrimer Descriptor: Cellulose synthase Authors: Ho, R, Palliniti, P, Zimmer, J. Deposit date: 2024-01-02 Release date: 2025-01-15 Last modified: 2025-06-04 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: Structure, function and assembly of soybean primary cell wall cellulose synthases. Elife, 13, 2025
8VHV	Transmembrane AMPA Receptor Regulatory Protein Subunit Gamma 2 Descriptor: Voltage-dependent calcium channel gamma-2 subunit Authors: Hale, W.D, Montano Romero, A, Huganir, R.L, Twomey, E.C. Deposit date: 2024-01-02 Release date: 2025-01-22 Last modified: 2025-05-21 Method: ELECTRON MICROSCOPY (2.3 Å) Cite: Structure of transmembrane AMPA receptor regulatory protein subunit gamma 2. Nat Commun, 16, 2025

<64656667686970717273747576777879>