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2UZD
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BU of 2uzd by Molmil
Crystal structure of human CDK2 complexed with a thiazolidinone inhibitor
Descriptor: 4-{5-[(Z)-(2-IMINO-4-OXO-1,3-THIAZOLIDIN-5-YLIDENE)METHYL]FURAN-2-YL}BENZENESULFONAMIDE, CELL DIVISION PROTEIN KINASE 2, CYCLIN A2
Authors:Richardson, C.M, Dokurno, P, Murray, J.B, Surgenor, A.E.
Deposit date:2007-04-27
Release date:2007-06-26
Last modified:2019-04-03
Method:X-RAY DIFFRACTION (2.72 Å)
Cite:Discovery of a Potent Cdk2 Inhibitor with a Novel Binding Mode, Using Virtual Screening and Initial, Structure-Guided Lead Scoping.
Bioorg.Med.Chem.Lett., 17, 2007
4WFZ
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BU of 4wfz by Molmil
Coxsackievirus B3 3Dpol RNA Dependent RNA Polymerase - NaCl Crystal Form
Descriptor: RNA-directed RNA polymerase, SODIUM ION
Authors:Peersen, O.B, McDonald, S.M.
Deposit date:2014-09-17
Release date:2014-10-22
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.803 Å)
Cite:Structure-Function Relationships Underlying the Replication Fidelity of Viral RNA-Dependent RNA Polymerases.
J.Virol., 89, 2015
8H7M
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BU of 8h7m by Molmil
Structure of nanobody 11A in complex with parathion
Descriptor: Nanobody 11A, parathion
Authors:Wang, H, Li, J.D, Shen, X, Xu, Z.L, Sun, Y.M.
Deposit date:2022-10-20
Release date:2023-10-25
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Structure of nanobody 11A in complex with parathion
To Be Published
2V06
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BU of 2v06 by Molmil
Crystal structure of the PPM Ser-Thr phosphatase MsPP from Mycobacterium smegmatis at pH 5.5
Descriptor: CHLORIDE ION, MAGNESIUM ION, SER-THR PHOSPHATASE MSPP
Authors:Wehenkel, A, Bellinzoni, M, Schaeffer, F, Villarino, A, Alzari, P.M.
Deposit date:2007-05-08
Release date:2007-10-16
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Structural and Binding Studies of the Three-Metal Center in Two Mycobacterial Ppm Ser/Thr Protein Phosphatases.
J.Mol.Biol., 374, 2007
4WG5
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BU of 4wg5 by Molmil
Calcium-Dependent Protein Kinase 1 from Toxoplasma gondii (TgCDPK1) in complex with inhibitor UW1647
Descriptor: 5-amino-3-[7-(cyclobutyloxy)quinolin-3-yl]-1-cyclohexyl-1H-pyrazole-4-carboxamide, Calmodulin-domain protein kinase 1
Authors:Merritt, E.A.
Deposit date:2014-09-17
Release date:2014-10-15
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Calcium-Dependent Protein Kinase 1 from Toxoplasma gondii (TgCDPK1) in complex with inhibitor UW1647
to be published
2UZG
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BU of 2uzg by Molmil
Zf-UBP domain of VDU1
Descriptor: UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 33, ZINC ION
Authors:Allen, M.D, Bycroft, M.
Deposit date:2007-04-27
Release date:2007-05-08
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The Solution Structure of the Znf Ubp Domain of Usp33/Vdu1.
Protein Sci., 16, 2007
8H7J
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BU of 8h7j by Molmil
The crystal structure of CD163 SRCR5-9
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Scavenger receptor cysteine-rich type 1 protein M130, ...
Authors:Luo, Z.P, Li, R, Ma, H.F.
Deposit date:2022-10-20
Release date:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The crystal structure of CD163 SRCR5-9
To Be Published
4WH9
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BU of 4wh9 by Molmil
Structure of the CDC25B Phosphatase Catalytic Domain with Bound Inhibitor
Descriptor: 2-[(2-cyano-3-fluoro-5-hydroxyphenyl)sulfanyl]ethanesulfonic acid, GLYCEROL, M-phase inducer phosphatase 2, ...
Authors:Lund, G.L, Dudkin, S, Borkin, D, Ni, W, Grembecka, J, Cierpicki, T.
Deposit date:2014-09-20
Release date:2014-12-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Inhibition of CDC25B Phosphatase Through Disruption of Protein-Protein Interaction.
Acs Chem.Biol., 10, 2015
8HQE
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BU of 8hqe by Molmil
Cryo-EM structure of the apo-GPR132-Gi
Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(i) subunit alpha-1, ...
Authors:Wang, J.L, Ding, J.H, Sun, J.P, Yu, X.
Deposit date:2022-12-13
Release date:2023-10-11
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (2.97 Å)
Cite:Functional screening and rational design of compounds targeting GPR132 to treat diabetes.
Nat Metab, 5, 2023
2VCA
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BU of 2vca by Molmil
Family 89 glycoside hydrolase from Clostridium perfringens in complex with beta-N-acetyl-D-glucosamine
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ALPHA-N-ACETYLGLUCOSAMINIDASE, CALCIUM ION, ...
Authors:Ficko-Blean, E, Stubbs, K.A, Berg, O, Vocadlo, D.J, Boraston, A.B.
Deposit date:2007-09-19
Release date:2008-03-18
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural and Mechanistic Insight Into the Basis of Mucopolysaccharidosis Iiib.
Proc.Natl.Acad.Sci.USA, 105, 2008
7ZWO
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BU of 7zwo by Molmil
Crystal structure of human BCL6 BTB domain in complex with compound 2
Descriptor: (5~{S},7~{R})-5-(4-chlorophenyl)-7-(2,3,4-trimethoxyphenyl)-4,5,6,7-tetrahydro-[1,2,4]triazolo[1,5-a]pyrimidine, 1,2-ETHANEDIOL, ALA-TRP-VAL-ILE-PRO-ALA, ...
Authors:Collie, G.W, Le Bihan, Y.-V, van Montfort, R.L.M.
Deposit date:2022-05-19
Release date:2022-11-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:Discovering cell-active BCL6 inhibitors: effectively combining biochemical HTS with multiple biophysical techniques, X-ray crystallography and cell-based assays.
Sci Rep, 12, 2022
2VDP
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BU of 2vdp by Molmil
Integrin AlphaIIbBeta3 Headpiece Bound to Fibrinogen Gamma chain peptide,LGGAKQAGDV
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, FIBRINOGEN, ...
Authors:Springer, T.A, Zhu, J, Xiao, T.
Deposit date:2007-10-10
Release date:2008-09-02
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural Basis for Distinctive Recognition of Fibrinogen Gammac Peptide by the Platelet Integrin Alphaiibbeta3.
J.Cell Biol., 182, 2008
8H4X
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BU of 8h4x by Molmil
Structure of cleaved Serpin B9
Descriptor: 1,2-ETHANEDIOL, Serpin B9, ZINC ION
Authors:Zhou, A, Yan, T.
Deposit date:2022-10-11
Release date:2023-10-25
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Expression, purification and crystallization of cleaved Serpin B9
To Be Published
7ZWS
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BU of 7zws by Molmil
Crystal structure of human BCL6 BTB domain in complex with compound 13
Descriptor: 1,2-ETHANEDIOL, 2-[3-cyano-6-thiophen-2-yl-4-(trifluoromethyl)pyridin-2-yl]sulfanyl-2-phenyl-ethanoic acid, ALA-TRP-VAL-ILE-PRO-ALA, ...
Authors:Collie, G.W, Le Bihan, Y.-V, van Montfort, R.L.M.
Deposit date:2022-05-19
Release date:2022-11-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Discovering cell-active BCL6 inhibitors: effectively combining biochemical HTS with multiple biophysical techniques, X-ray crystallography and cell-based assays.
Sci Rep, 12, 2022
4WHK
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BU of 4whk by Molmil
A New Class of Peptidomimetics Targeting the Polo-box Domain of Polo-like kinase 1
Descriptor: C6H5(CH2)8-DERIVATIZED PEPTIDE INHIBITOR, Serine/threonine-protein kinase PLK1
Authors:Bang, J.K, Han, Y.H, Ahn, M.J, Lee, K.S.
Deposit date:2014-09-23
Release date:2014-12-03
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A new class of peptidomimetics targeting the polo-box domain of polo-like kinase 1.
J.Med.Chem., 58, 2015
2UZ6
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BU of 2uz6 by Molmil
AChBP-targeted a-conotoxin correlates distinct binding orientations with nAChR subtype selectivity.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ALPHA-CONOTOXIN TXIA(A10L), GLYCEROL, ...
Authors:Ulens, C, Dutertre, S, Buttner, R, Fish, A, van Elk, R, Kendel, Y, Hopping, G, Alewood, P.F, Schroeder, C, Nicke, A, Smit, A.B, Sixma, T.K, Lewis, R.J.
Deposit date:2007-04-25
Release date:2007-08-07
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Achbp-Targeted Alpha-Conotoxin Correlates Distinct Binding Orientations with Nachr Subtype Selectivity
Embo J., 26, 2007
8H5L
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BU of 8h5l by Molmil
Crystal structure of PETase N37D/S121E/R132E/A171C/A180V/P181V/D186H/S193C/A202C/V211C/S214Y/R224E/N233C/S242T/N246D/N275C/S282C/F284C mutant from Ideonella sakaiensis
Descriptor: IODIDE ION, POTASSIUM ION, Poly(ethylene terephthalate) hydrolase
Authors:Lee, S.H, Seo, H, Kim, K.-J.
Deposit date:2022-10-13
Release date:2023-10-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A case of balance engineering exhibits kinetic relationship between mesophilic and thermophilic poly(ethylene terephthalate) depolymerases.
To Be Published
4WHO
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BU of 4who by Molmil
Resting Protocatechuate 3,4-dioxygenase (pseudomonas putida) at pH 8.5
Descriptor: BETA-MERCAPTOETHANOL, BICARBONATE ION, FE (III) ION, ...
Authors:Knoot, C.J, Lipscomb, J.D.
Deposit date:2014-09-23
Release date:2014-12-31
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Crystal structures of alkylperoxo and anhydride intermediates in an intradiol ring-cleaving dioxygenase.
Proc.Natl.Acad.Sci.USA, 112, 2015
8H6H
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BU of 8h6h by Molmil
cryo-EM structure of cellodextrin phosphorylase from Clostridium thermocellum
Descriptor: CHLORIDE ION, Cellodextrin phosphorylase
Authors:Kuga, T, Sunagawa, N, Igarashi, K.
Deposit date:2022-10-17
Release date:2023-10-25
Method:ELECTRON MICROSCOPY (2.3 Å)
Cite:structure and dynamics of cellodextrin phosphorylase from Clostridium thermocellum determine chain length and crystalline packing of highly ordered cellulose II synthesized in vitro
To Be Published
2UZI
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BU of 2uzi by Molmil
Crystal structure of HRAS(G12V) - anti-RAS Fv complex
Descriptor: ANTI-RAS FV HEAVY CHAIN, ANTI-RAS FV LIGHT CHAIN, GTPASE HRAS, ...
Authors:Tanaka, T, williams, R.L, Rabbitts, T.H.
Deposit date:2007-04-27
Release date:2007-06-26
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Tumour Prevention by a Single Antibody Domain Targeting the Interaction of Signal Transduction Proteins with Ras.
Embo J., 26, 2007
4WHY
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BU of 4why by Molmil
Structure of the Hepatitis C virus envelope glycoprotein E2 antigenic region 412-423 bound to the broadly neutralizing antibody 3/11, P21 crystal form
Descriptor: Heavy chain of Fab fragment derived from neutralizing antibody 3/11, Light chain of Fab fragment derived from neutralizing antibody 3/11, epitope peptide
Authors:Krey, T, Rey, F.A.
Deposit date:2014-09-24
Release date:2014-12-17
Last modified:2015-02-04
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Structural flexibility of a conserved antigenic region in hepatitis C virus glycoprotein e2 recognized by broadly neutralizing antibodies.
J.Virol., 89, 2015
2VEA
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BU of 2vea by Molmil
The complete sensory module of the cyanobacterial phytochrome Cph1 in the Pr-state.
Descriptor: PHYCOCYANOBILIN, PHYTOCHROME-LIKE PROTEIN CPH1
Authors:Essen, L.-O, Mailliet, J, Hughes, J.
Deposit date:2007-10-18
Release date:2008-09-30
Last modified:2014-02-26
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:The Structure of a Complete Phytochrome Sensory Module in the Pr Ground State.
Proc.Natl.Acad.Sci.USA, 105, 2008
8H2W
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BU of 8h2w by Molmil
Cellodextrin phosphorylase from Clostridium thermocellum mutant - all cysteine residues were substituted with serines
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, CHLORIDE ION, ...
Authors:Kuga, T, Sunagawa, N, Igarashi, K.
Deposit date:2022-10-07
Release date:2023-10-11
Method:X-RAY DIFFRACTION (1.21 Å)
Cite:11 cysteine-to-serine mutations improve stability of cellodextrin phosphorylase from Clostridium thermocellum
To Be Published
4WHG
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BU of 4whg by Molmil
Crystal Structure of TR3 LBD in complex with Molecule 3
Descriptor: 1-(3,4,5-trihydroxyphenyl)octan-1-one, GLYCEROL, Nuclear receptor subfamily 4 group A member 1
Authors:Li, F.W, Cai, Q.X, Li, A.Z, Tian, X.Y, Wang, W.J, Wang, Y, Hou, P.P, Wu, Q, Lin, T.W.
Deposit date:2014-09-22
Release date:2015-09-09
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Induction of Autophagic Death in Cancer Cells by Agonizing TR3 and Attenuating Akt2 Activity
Chem.Biol., 22, 2015
8HBK
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BU of 8hbk by Molmil
The crystal structure of SARS-CoV-2 3CL protease in complex with Ensitrelvir
Descriptor: 3C-like proteinase nsp5, 6-[(6-chloranyl-2-methyl-indazol-5-yl)amino]-3-[(1-methyl-1,2,4-triazol-3-yl)methyl]-1-[[2,4,5-tris(fluoranyl)phenyl]methyl]-1,3,5-triazine-2,4-dione
Authors:Lin, M.
Deposit date:2022-10-29
Release date:2023-10-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Molecular mechanisms of SARS-CoV-2 resistance to nirmatrelvir.
Nature, 622, 2023

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