PDB: 1414 resultsInfo pagesStatus searchChemie searchBIRD

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4OFI	Crystal Structure of Duf (Kirre) D1 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Kin of irre, isoform A, ... Authors: Ozkan, E, Garcia, K.C. Deposit date: 2014-01-14 Release date: 2014-02-19 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Extracellular Architecture of the SYG-1/SYG-2 Adhesion Complex Instructs Synaptogenesis. Cell(Cambridge,Mass.), 156, 2014
4ODB	Crystal structure of the T1L reovirus attachment protein sigma1 in complex with Junctional Adhesion Molecule-A Descriptor: Junctional adhesion molecule A, Outer capsid protein sigma-1 Authors: Stettner, E, Stehle, T. Deposit date: 2014-01-10 Release date: 2015-04-01 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (3.2 Å) Cite: The JAM-A binding site is conserved in reovirus sigma1: Structure of the T1L sigma1-JAM-A complex To be Published
4ODX	4E10 germline encoded precursor no.7 in complex with epitope scaffold T117 Descriptor: 4E10 epitope scaffold T117, GEP7 Fv heavy chain, GEP7 Fv light chain Authors: Finton, K.A.K. Deposit date: 2014-01-10 Release date: 2014-10-08 Method: X-RAY DIFFRACTION (3.1 Å) Cite: Ontogeny of Recognition Specificity and Functionality for the Broadly Neutralizing Anti-HIV Antibody 4E10. Plos Pathog., 10, 2014
4OCY	Fab for methotrexate (unbound apo) Descriptor: Fab ADD058 Heavy Chain, Fab ADD058 Light Chain Authors: Longenecker, K.L, Judge, R.A, Gayda, S, Manoj, S, Saldana, S, Ruan, Q, Swift, K, Tetin, S. Deposit date: 2014-01-09 Release date: 2014-07-02 Last modified: 2017-11-22 Method: X-RAY DIFFRACTION (2.79 Å) Cite: Water channel in the binding site of a high affinity anti-methotrexate antibody. Biochemistry, 53, 2014
4OCX	Fab complex with methotrexate Descriptor: Fab ADD056 Heavy Chain, Fab ADD056 Light Chain, N-(4-{[(2,4-DIAMINOPTERIDIN-1-IUM-6-YL)METHYL](METHYL)AMINO}BENZOYL)-L-GLUTAMIC ACID Authors: Longenecker, K.L, Judge, R.A, Gayda, S, Manoj, S, Saldana, S, Ruan, Q, Swift, K, Tetin, S. Deposit date: 2014-01-09 Release date: 2014-07-02 Last modified: 2017-11-22 Method: X-RAY DIFFRACTION (2.39 Å) Cite: Water channel in the binding site of a high affinity anti-methotrexate antibody. Biochemistry, 53, 2014
4OB5	Ontogeny of recognition specificity and functionality for the broadly neutralizing anti-HIV antibody 4E10 Descriptor: 4E10 antibody germline precursor 7 heavy chain Fv, 4E10 antibody germline precursor 7 light chain Fv, GLYCEROL, ... Authors: Jaffe, J.B, Rupert, P.B. Deposit date: 2014-01-06 Release date: 2014-10-08 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Ontogeny of Recognition Specificity and Functionality for the Broadly Neutralizing Anti-HIV Antibody 4E10. Plos Pathog., 10, 2014
4CKD	Model of complex between the E.coli enzyme beta-galactosidase and four single chain Fv antibody domains scFv13R4. Descriptor: BETA-GALACTOSIDASE, SCFV13R4 ANTIBODY FV HEAVY CHAIN, SCFV13R4 ANTIBODY FV LIGHT CHAIN Authors: Vinothkumar, K.R, McMullan, G, Henderson, R. Deposit date: 2014-01-03 Release date: 2014-01-15 Last modified: 2019-10-23 Method: ELECTRON MICROSCOPY (13 Å) Cite: Molecular Mechanism of Antibody-Mediated Activation of Beta-Galactosidase. Structure, 22, 2014
4O58	Crystal structure of broadly neutralizing antibody F045-092 in complex with A/Victoria/3/1975 (H3N2) influenza hemagglutinin Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, DI(HYDROXYETHYL)ETHER, ... Authors: Lee, P.S, Wilson, I.A. Deposit date: 2013-12-19 Release date: 2014-04-16 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.7501 Å) Cite: Receptor mimicry by antibody F045-092 facilitates universal binding to the H3 subtype of influenza virus. Nat Commun, 5, 2014
4O5L	Crystal structure of broadly neutralizing antibody F045-092 Descriptor: Fab F045-092 heavy chain, Fab F045-092 light chain, PHOSPHATE ION Authors: Lee, P.S, Wilson, I.A. Deposit date: 2013-12-19 Release date: 2014-04-16 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.5045 Å) Cite: Receptor mimicry by antibody F045-092 facilitates universal binding to the H3 subtype of influenza virus. Nat Commun, 5, 2014
4O5I	Crystal structure of broadly neutralizing antibody F045-092 in complex with A/Victoria/361/2011 (H3N2) influenza hemagglutinin Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fab F045-092 heavy chain, ... Authors: Lee, P.S, Wilson, I.A. Deposit date: 2013-12-19 Release date: 2014-04-16 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (6.501 Å) Cite: Receptor mimicry by antibody F045-092 facilitates universal binding to the H3 subtype of influenza virus. Nat Commun, 5, 2014
4NWU	Crystal structure of APE1551, an anti-human NGF Fab with a nine amino acid insertion in CDR H1 Descriptor: APE1551 Ab Fab heavy chain, APE1551 Ab Fab light chain Authors: Verdino, P, Stanfield, R.L, Wilson, I.A. Deposit date: 2013-12-06 Release date: 2014-10-22 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (1.602 Å) Cite: Nucleotide insertions and deletions complement point mutations to massively expand the diversity created by somatic hypermutation of antibodies. J.Biol.Chem., 289, 2014
4NWT	Crystal structure of the anti-human NGF Fab APE1531 Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ACETATE ION, APE1531 Ab Fab heavy chain, ... Authors: Verdino, P, Stanfield, R.L, Wilson, I.A. Deposit date: 2013-12-06 Release date: 2014-10-22 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.75 Å) Cite: Nucleotide insertions and deletions complement point mutations to massively expand the diversity created by somatic hypermutation of antibodies. J.Biol.Chem., 289, 2014
4NUJ	Crystal structure of HIV-1 broadly neutralizing antibody PGT152 Descriptor: PGT152 heavy chain, PGT152 light chain Authors: Blattner, C, Wilson, I.A. Deposit date: 2013-12-03 Release date: 2014-05-14 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.827 Å) Cite: Structural Delineation of a Quaternary, Cleavage-Dependent Epitope at the gp41-gp120 Interface on Intact HIV-1 Env Trimers. Immunity, 40, 2014
4NUG	Crystal structure of HIV-1 broadly neutralizing antibody PGT151 Descriptor: HEXAETHYLENE GLYCOL, PGT151 heavy chain, PGT151 light chain Authors: Blattner, C, Wilson, I.A. Deposit date: 2013-12-03 Release date: 2014-05-14 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.8617 Å) Cite: Structural Delineation of a Quaternary, Cleavage-Dependent Epitope at the gp41-gp120 Interface on Intact HIV-1 Env Trimers. Immunity, 40, 2014
4NQD	Crystal structure of TCR-MR1 ternary complex and non-covalently bound 5-(2-oxopropylideneamino)-6-D-ribitylaminouracil Descriptor: 1-deoxy-1-({2,6-dioxo-5-[(E)-(2-oxopropylidene)amino]-1,2,3,6-tetrahydropyrimidin-4-yl}amino)-D-ribitol, Beta-2-microglobulin, GLYCEROL, ... Authors: Birkinshaw, R.W, Rossjohn, J. Deposit date: 2013-11-25 Release date: 2014-04-16 Last modified: 2014-11-19 Method: X-RAY DIFFRACTION (2.2 Å) Cite: T-cell activation by transitory neo-antigens derived from distinct microbial pathways. Nature, 509, 2014
4NQE	Crystal structure of TCR-MR1 ternary complex bound to 5-(2-oxoethylideneamino)-6-D-ribitylaminouracil Descriptor: 1-deoxy-1-({2,6-dioxo-5-[(E)-(2-oxoethylidene)amino]-1,2,3,6-tetrahydropyrimidin-4-yl}amino)-D-ribitol, Beta-2-microglobulin, Major histocompatibility complex class I-related gene protein, ... Authors: Birkinshaw, R.W, Rossjohn, J. Deposit date: 2013-11-25 Release date: 2014-04-16 Last modified: 2020-02-19 Method: X-RAY DIFFRACTION (2.1 Å) Cite: T-cell activation by transitory neo-antigens derived from distinct microbial pathways. Nature, 509, 2014
4NQC	Crystal structure of TCR-MR1 ternary complex and covalently bound 5-(2-oxopropylideneamino)-6-D-ribitylaminouracil Descriptor: 1-deoxy-1-({2,6-dioxo-5-[(E)-(2-oxopropylidene)amino]-1,2,3,6-tetrahydropyrimidin-4-yl}amino)-D-ribitol, Beta-2-microglobulin, Major histocompatibility complex class I-related gene protein, ... Authors: Birkinshaw, R.W, Rossjohn, J. Deposit date: 2013-11-25 Release date: 2014-04-16 Last modified: 2014-11-19 Method: X-RAY DIFFRACTION (2.5 Å) Cite: T-cell activation by transitory neo-antigens derived from distinct microbial pathways. Nature, 509, 2014
4NPY	Crystal structure of germline Fab PGT121, a putative precursor of the broadly reactive and potent HIV-1 neutralizing antibody Descriptor: GLYCEROL, germline PGT121 heavy chain, germline PGT121 light chain Authors: Julien, J.-P, Diwanji, D.C, Wilson, I.A. Deposit date: 2013-11-22 Release date: 2013-12-11 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.796 Å) Cite: The Effects of Somatic Hypermutation on Neutralization and Binding in the PGT121 Family of Broadly Neutralizing HIV Antibodies. Plos Pathog., 9, 2013
4NOB	Crystal structure of the 1st Ig domain from mouse Polymeric Immunoglobulin receptor [PSI-NYSGRC-006220] Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, MAGNESIUM ION, ... Authors: Kumar, P.R, Banu, R, Bhosle, R, Calarese, D.A, Celikgil, A, Chamala, S, Chan, M.K, Chowdhury, S, Fiser, A, Garforth, S.J, Glenn, A.S, Hillerich, B, Khafizov, K, Attonito, J, Love, J.D, Patel, H, Patel, R, Seidel, R.D, Smith, B, Stead, M, Casadevall, A, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC), Atoms-to-Animals: The Immune Function Network (IFN) Deposit date: 2013-11-19 Release date: 2013-12-04 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.51 Å) Cite: Crystal structure of the 1st Ig domain from mouse Polymeric Immunoglobulin receptor to be published
4NOF	Crystal structure of the second Ig domain from mouse Polymeric Immunoglobulin receptor [PSI-NYSGRC-006220] Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Polymeric immunoglobulin receptor Authors: Sampathkumar, P, Kumar, P.R, Ahmed, M, Banu, R, Bhosle, R, Calarese, D.A, Celikgil, A, Chamala, S, Chan, M.K, Chowdhury, S, Fiser, A, Garforth, S.J, Glenn, A.S, Hillerich, B, Khafizov, K, Attonito, J, Love, J.D, Patel, H, Patel, R, Seidel, R.D, Smith, B, Stead, M, Casadevall, A, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC), Atoms-to-Animals: The Immune Function Network (IFN) Deposit date: 2013-11-19 Release date: 2013-12-04 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.65 Å) Cite: Crystal structure of the second Ig domain from mouse Polymeric Immunoglobulin receptor to be published
4NM4	Crystal structure of broadly neutralizing antibody CR8043 Descriptor: Antibody CR8043, Heavy Chain, Light Chain, ... Authors: Lee, P.S, Wilson, I.A. Deposit date: 2013-11-14 Release date: 2013-12-25 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.65 Å) Cite: A common solution to group 2 influenza virus neutralization. Proc.Natl.Acad.Sci.USA, 111, 2014
4NM8	Crystal structure of broadly neutralizing antibody CR8043 bound to H3 influenza hemagglutinin Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Antibody CR8043, ... Authors: Lee, P.S, Wilson, I.A. Deposit date: 2013-11-14 Release date: 2013-12-25 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (4.0041 Å) Cite: A common solution to group 2 influenza virus neutralization. Proc.Natl.Acad.Sci.USA, 111, 2014
4NJ9	Crystal structure of Fab 8B10 in complex with MPTS Descriptor: 8-methoxypyrene-1,3,6-trisulfonic acid, 8B10 heavy chain, 8B10 light chain, ... Authors: Stanfield, R.L, Romesberg, F.E, Zimmermann, J, Wilson, I.A. Deposit date: 2013-11-08 Release date: 2014-11-12 Last modified: 2017-06-14 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Adaptive Mutations Alter Antibody Structure and Dynamics during Affinity Maturation. Biochemistry, 54, 2015
4NJA	Crystal structure of Fab 6C8 in complex with MPTS Descriptor: 6C8 heavy chain, 6C8 light chain, 8-methoxypyrene-1,3,6-trisulfonic acid, ... Authors: Stanfield, R.L, Romesberg, F.E, Zimmermann, J, Wilson, I.A. Deposit date: 2013-11-08 Release date: 2014-11-12 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.204 Å) Cite: Adaptive Mutations Alter Antibody Structure and Dynamics during Affinity Maturation. Biochemistry, 54, 2015
4NHU	The M33 TCR p3M33l/H-2 Ld Complex Descriptor: 2C m33 alpha VmCh chimera, 2C m33 beta VmCh chimera, H-2 class I histocompatibility antigen, ... Authors: Birnbaum, M.E, Adams, J.J, Garcia, K.C. Deposit date: 2013-11-05 Release date: 2015-05-06 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Interrogating TCR Signal Strength and Cross-Reactivity by Yeast Display of pMHC To be Published

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