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6D5A
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Crystal structure of L,D-transpeptidase 5 from Mycobacterium tuberculosis in apo form
Descriptor: L,D-transpeptidase 5, TETRAETHYLENE GLYCOL
Authors:Libreros, G.A, Dias, M.V.
Deposit date:2018-04-19
Release date:2019-02-27
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.622 Å)
Cite:Structural Basis for the Interaction and Processing of beta-Lactam Antibiotics by l,d-Transpeptidase 3 (LdtMt3) from Mycobacterium tuberculosis.
ACS Infect Dis, 5, 2019
9EUD
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BU of 9eud by Molmil
The FK1 domain of FKBP51 in complex with SAFit-analog 23c
Descriptor: (1-propan-2-ylpyrazol-4-yl)methyl (2S)-1-[(2S)-2-cyclohexyl-2-(3,4,5-trimethoxyphenyl)ethanoyl]piperidine-2-carboxylate, Peptidyl-prolyl cis-trans isomerase FKBP5
Authors:Meyners, C, Buffa, V, Hausch, F.
Deposit date:2024-03-27
Release date:2024-06-12
Method:X-RAY DIFFRACTION (2.022 Å)
Cite:1,4-Pyrazolyl-containing SAFit-analogues are selective FKBP51 inhibitors with improved ligand efficiency and drug-like profile.
Chemmedchem, 2024
8WW2
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BU of 8ww2 by Molmil
GPR3/Gs complex
Descriptor: CHOLESTEROL HEMISUCCINATE, G-protein coupled receptor 3, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:He, Y, Xiong, Y.
Deposit date:2023-10-24
Release date:2024-02-14
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (2.79 Å)
Cite:Identification of oleic acid as an endogenous ligand of GPR3.
Cell Res., 34, 2024
9EU6
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BU of 9eu6 by Molmil
The FK1 domain of FKBP51 in complex with SAFit-analog 23j
Descriptor: (1,5-dimethylpyrazol-4-yl)methyl (2~{S})-1-[(2~{S})-2-cyclohexyl-2-(3,4,5-trimethoxyphenyl)ethanoyl]piperidine-2-carboxylate, Peptidyl-prolyl cis-trans isomerase FKBP5
Authors:Meyners, C, Buffa, V, Hausch, F.
Deposit date:2024-03-27
Release date:2024-06-12
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:1,4-Pyrazolyl-containing SAFit-analogues are selective FKBP51 inhibitors with improved ligand efficiency and drug-like profile.
Chemmedchem, 2024
8WSS
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BU of 8wss by Molmil
Cryo-EM structure of Melanin-Concentrating Hormone Receptor 1 with MCH
Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(i) subunit alpha-1, ...
Authors:Zhao, L, He, Q, Yuan, Q, Gu, Y, Shan, H, Hu, W, Wu, K, Xu, H.E, Zhang, Y, Wu, C.
Deposit date:2023-10-17
Release date:2024-06-19
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.01 Å)
Cite:Mechanisms of ligand recognition and activation of melanin-concentrating hormone receptors.
Cell Discov, 10, 2024
8ZFQ
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BU of 8zfq by Molmil
Crystal Structure of Human PPARgamma Ligand Binding Domain in Complex with T0070907 and BVT.13
Descriptor: 2-[(2,4-DICHLOROBENZOYL)AMINO]-5-(PYRIMIDIN-2-YLOXY)BENZOIC ACID, 2-chloro-5-nitro-N-(pyridin-4-yl)benzamide, Peroxisome proliferator-activated receptor gamma
Authors:Shang, J, Kojetin, D.J.
Deposit date:2024-05-08
Release date:2024-08-07
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Unanticipated mechanisms of covalent inhibitor and synthetic ligand cobinding to PPAR gamma.
Elife, 2024
9BKK
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BU of 9bkk by Molmil
Cholecystokinin 1 receptor (CCK1R) sterol 7M mutant, Gq chimera (mGsqi) complex
Descriptor: Cholecystokinin receptor type A, Cholecystokinin-8, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Harikumar, K.G, Zhao, P, Cary, B.P, Xu, X, Desai, A.J, Mobbs, J.I, Toufaily, C, Furness, S.G.B, Christopoulos, A, Belousoff, M.J, Wootten, D, Sexton, P.M, Miller, L.J.
Deposit date:2024-04-29
Release date:2024-05-22
Last modified:2024-08-14
Method:ELECTRON MICROSCOPY (2.51 Å)
Cite:Cholesterol-dependent dynamic changes in the conformation of the type 1 cholecystokinin receptor affect ligand binding and G protein coupling.
Plos Biol., 22, 2024
6UJW
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BU of 6ujw by Molmil
P-glycoprotein mutant-Y306A and C952A-with BDE100
Descriptor: 2,4-dibromophenyl 2,4,6-tribromophenyl ether, ATP-dependent translocase ABCB1
Authors:Aller, S.G, Le, C.A.
Deposit date:2019-10-03
Release date:2020-05-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (4.15 Å)
Cite:Structural definition of polyspecific compensatory ligand recognition by P-glycoprotein.
Iucrj, 7, 2020
1SLF
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BU of 1slf by Molmil
APOSTREPTAVIDIN, PH 5.6, TWO MOLECULES OF (SO4)2 BOUND AT THE BIOTIN BINDING SITE
Descriptor: STREPTAVIDIN, SULFATE ION
Authors:Katz, B.A.
Deposit date:1995-03-10
Release date:1996-04-03
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Binding to protein targets of peptidic leads discovered by phage display: crystal structures of streptavidin-bound linear and cyclic peptide ligands containing the HPQ sequence
Biochemistry, 34, 1995
9EUB
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BU of 9eub by Molmil
The FK1 domain of FKBP51 in complex with SAFit-analog 24e
Descriptor: Peptidyl-prolyl cis-trans isomerase FKBP5, [1-(2-hydroxyethyl)pyrazol-4-yl]methyl (2S)-1-[(2S)-2-cyclohexyl-2-(3,4,5-trimethoxyphenyl)ethanoyl]piperidine-2-carboxylate
Authors:Meyners, C, Buffa, V, Hausch, F.
Deposit date:2024-03-27
Release date:2024-06-12
Method:X-RAY DIFFRACTION (2 Å)
Cite:1,4-Pyrazolyl-containing SAFit-analogues are selective FKBP51 inhibitors with improved ligand efficiency and drug-like profile.
Chemmedchem, 2024
1SLG
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BU of 1slg by Molmil
STREPTAVIDIN, PH 5.6, BOUND TO PEPTIDE FCHPQNT
Descriptor: FCHPQNT, STREPTAVIDIN
Authors:Katz, B.A.
Deposit date:1995-03-10
Release date:1996-04-03
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Binding to protein targets of peptidic leads discovered by phage display: crystal structures of streptavidin-bound linear and cyclic peptide ligands containing the HPQ sequence
Biochemistry, 34, 1995
9EU8
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BU of 9eu8 by Molmil
The FK1 domain of FKBP51 in complex with SAFit-analog 15h
Descriptor: (4-methyl-1,3-thiazol-5-yl)methyl (2S)-1-[(2S)-2-cyclohexyl-2-(3,4,5-trimethoxyphenyl)ethanoyl]piperidine-2-carboxylate, Peptidyl-prolyl cis-trans isomerase FKBP5
Authors:Meyners, C, Buffa, V, Hausch, F.
Deposit date:2024-03-27
Release date:2024-06-12
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:1,4-Pyrazolyl-containing SAFit-analogues are selective FKBP51 inhibitors with improved ligand efficiency and drug-like profile.
Chemmedchem, 2024
2XJK
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BU of 2xjk by Molmil
Monomeric Human Cu,Zn Superoxide dismutase
Descriptor: COPPER (II) ION, SUPEROXIDE DISMUTASE [CU-ZN], ZINC ION
Authors:Saraboji, K, Leinartaite, L, Nordlund, A, Oliveberg, M, Logan, D.T.
Deposit date:2010-07-07
Release date:2010-09-01
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Folding Catalysis by Transient Coordination of Zn2+ to the Cu Ligands of the Als-Associated Enzyme Cu/Zn Superoxide Dismutase 1.
J.Am.Chem.Soc., 132, 2010
1SLE
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BU of 1sle by Molmil
STREPTAVIDIN, PH 5.0, BOUND TO CYCLIC PEPTIDE AC-CHPQGPPC-NH2
Descriptor: AC-CHPQGPPC-NH2, STREPTAVIDIN
Authors:Katz, B.A.
Deposit date:1995-03-10
Release date:1996-04-03
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2 Å)
Cite:Binding to protein targets of peptidic leads discovered by phage display: crystal structures of streptavidin-bound linear and cyclic peptide ligands containing the HPQ sequence
Biochemistry, 34, 1995
4GBA
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BU of 4gba by Molmil
DCNL complex with N-terminally acetylated NEDD8 E2 peptide
Descriptor: DCN1-like protein 3, NEDD8-conjugating enzyme UBE2F
Authors:Monda, J.K, Scott, D.C, Miller, D.J, Harper, J.W, Bennett, E.J, Schulman, B.A.
Deposit date:2012-07-26
Release date:2012-11-28
Last modified:2013-01-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Conservation of Distinctive N-terminal Acetylation-Dependent Interactions across a Family of Mammalian NEDD8 Ligation Enzymes.
Structure, 21, 2013
9BKJ
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BU of 9bkj by Molmil
Cholecystokinin 1 receptor (CCK1R) Y140A mutant, Gq chimera (mGsqi) complex
Descriptor: AMINO GROUP, Cholecystokinin receptor type A, Cholecystokinin-8, ...
Authors:Cary, B.P, Harikumar, K.G, Zhao, P, Desai, A.J, Mobbs, J.M, Toufaily, C, Furness, S.G.B, Christopoulos, A, Belousoff, M.J, Wootten, D, Sexton, P.M, Miller, L.J.
Deposit date:2024-04-29
Release date:2024-05-22
Last modified:2024-08-14
Method:ELECTRON MICROSCOPY (2.59 Å)
Cite:Cholesterol-dependent dynamic changes in the conformation of the type 1 cholecystokinin receptor affect ligand binding and G protein coupling.
Plos Biol., 22, 2024
8ZFN
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BU of 8zfn by Molmil
Crystal Structure of Human PPARgamma Ligand Binding Domain in Complex with GW9662 and BVT.13
Descriptor: 2-[(2,4-DICHLOROBENZOYL)AMINO]-5-(PYRIMIDIN-2-YLOXY)BENZOIC ACID, 2-chloro-5-nitro-N-phenylbenzamide, Peroxisome proliferator-activated receptor gamma
Authors:Shang, J, Kojetin, D.J.
Deposit date:2024-05-08
Release date:2024-08-07
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Unanticipated mechanisms of covalent inhibitor and synthetic ligand cobinding to PPAR gamma.
Elife, 2024
9AXG
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BU of 9axg by Molmil
Human saposin B in the presence of globotriaosylceramide-NBD
Descriptor: MALONATE ION, Saposin-B
Authors:Sawyer, T.K, Garman, S.C.
Deposit date:2024-03-06
Release date:2024-03-13
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Human Saposin B Ligand Binding and Presentation to alpha-Galactosidase A.
Biorxiv, 2024
1DEY
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BU of 1dey by Molmil
NMR SOLUTION STRUCTURE OF CO(II)-BLEOMYCIN A2
Descriptor: BLEOMYCIN A2, COBALT (II) ION
Authors:Lehmann, T.E, Serrano, M.L, Que Jr, L.
Deposit date:1999-11-16
Release date:2000-04-24
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Coordination chemistry of co(II)-bleomycin: its investigation through NMR and molecular dynamics.
Biochemistry, 39, 2000
5LKJ
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BU of 5lkj by Molmil
Crystal structure of mouse CARM1 in complex with ligand SA684
Descriptor: (2~{S})-4-[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl-(2-carbamimidamidoethyl)amino]-2-azanyl-butanoic acid, 1,2-DIMETHOXYETHANE, 1,2-ETHANEDIOL, ...
Authors:Cura, V, Marechal, N, Mailliot, J, Troffer-Charlier, N, Hassenboehler, P, Wurtz, J.M, Bonnefond, L, Cavarelli, J.
Deposit date:2016-07-22
Release date:2017-08-16
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.595 Å)
Cite:Crystal structure of mouse CARM1 in complex with ligands
To Be Published
6ME2
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BU of 6me2 by Molmil
XFEL crystal structure of human melatonin receptor MT1 in complex with ramelteon
Descriptor: DI(HYDROXYETHYL)ETHER, N-{2-[(8S)-1,6,7,8-tetrahydro-2H-indeno[5,4-b]furan-8-yl]ethyl}propanamide, OLEIC ACID, ...
Authors:Stauch, B, Johansson, L.C, McCorvy, J.D, Patel, N, Han, G.W, Gati, C, Batyuk, A, Ishchenko, A, Brehm, W, White, T.A, Michaelian, N, Madsen, C, Zhu, L, Grant, T.D, Grandner, J.M, Olsen, R.H.J, Tribo, A.R, Weierstall, U, Roth, B.L, Katritch, V, Liu, W, Cherezov, V.
Deposit date:2018-09-05
Release date:2019-04-24
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis of ligand recognition at the human MT1melatonin receptor.
Nature, 569, 2019
3U4N
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BU of 3u4n by Molmil
A novel covalently linked insulin dimer
Descriptor: Insulin A chain, Insulin B chain
Authors:Norrman, M, Vinther, T.N.
Deposit date:2011-10-10
Release date:2012-04-11
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Novel covalently linked insulin dimer engineered to investigate the function of insulin dimerization.
Plos One, 7, 2012
6ME4
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BU of 6me4 by Molmil
XFEL crystal structure of human melatonin receptor MT1 in complex with 2-iodomelatonin
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, N-[2-(2-iodo-5-methoxy-1H-indol-3-yl)ethyl]acetamide, ...
Authors:Stauch, B, Johansson, L.C, McCorvy, J.D, Patel, N, Han, G.W, Gati, C, Batyuk, A, Ishchenko, A, Brehm, W, White, T.A, Michaelian, N, Madsen, C, Zhu, L, Grant, T.D, Grandner, J.M, Olsen, R.H.J, Tribo, A.R, Weierstall, U, Roth, B.L, Katritch, V, Liu, W, Cherezov, V.
Deposit date:2018-09-05
Release date:2019-04-24
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural basis of ligand recognition at the human MT1melatonin receptor.
Nature, 569, 2019
3KVW
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BU of 3kvw by Molmil
Crystal Structure of dual-specificity tyrosine phosphorylation regulated kinase 2 (DYRK2) in complex with an indirubin ligand
Descriptor: (2Z,3E)-7'-bromo-3-(hydroxyimino)-2'-oxo-1,1',2',3-tetrahydro-2,3'-biindole-5-carboxylic acid, CHLORIDE ION, Dual specificity tyrosine-phosphorylation-regulated kinase 2
Authors:Filippakopoulos, P, Myrianthopoulos, V, Kritsanida, M, Magiatis, P, Skaltsounis, A.L, Soundararajan, M, Krojer, T, Gileadi, O, Hapka, E, Fedorov, O, Berridge, G, Wang, J, Shrestha, L, Vollmar, M, von Delft, F, Arrowsmith, C.H, Edwards, A, Weigelt, J, Bountra, C, Mikros, E, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2009-11-30
Release date:2010-01-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Crystal Structure of dual-specificity tyrosine phosphorylation regulated kinase 2 (DYRK2) in complex with an indirubin ligand
To be Published
6UIQ
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BU of 6uiq by Molmil
Crystal structure of wild-type human phosphoglucomutase 1 in complex with Glucose-6-Phosphate
Descriptor: 6-O-phosphono-alpha-D-glucopyranose, MAGNESIUM ION, phosphoglucomutase-1
Authors:Stiers, K.M, Beamer, L.J.
Deposit date:2019-10-01
Release date:2020-08-12
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A Hotspot for Disease-Associated Variants of Human PGM1 Is Associated with Impaired Ligand Binding and Loop Dynamics.
Structure, 26, 2018

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