PDB: 19228 resultsInfo pagesStatus searchChemie searchBIRD

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6EJ7	Human Xylosyltransferase 1 in complex with UDP-xylose and peptide QEEEGAGGGQGG Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, DI(HYDROXYETHYL)ETHER, ... Authors: Briggs, D.C, Hohenester, E. Deposit date: 2017-09-20 Release date: 2018-05-02 Last modified: 2024-10-16 Method: X-RAY DIFFRACTION (2 Å) Cite: Structural Basis for the Initiation of Glycosaminoglycan Biosynthesis by Human Xylosyltransferase 1. Structure, 26, 2018
6TWQ	MAGI1_2 complexed with a 16E6 peptide Descriptor: CALCIUM ION, CITRIC ACID, GLYCEROL, ... Authors: Gogl, G, Cousido-Siah, A, Trave, G. Deposit date: 2020-01-13 Release date: 2020-04-01 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (2.65 Å) Cite: Dual Specificity PDZ- and 14-3-3-Binding Motifs: A Structural and Interactomics Study. Structure, 28, 2020
4MTC	Crystal structure of human C53A DJ-1 Descriptor: 1,2-ETHANEDIOL, Protein DJ-1 Authors: Cendron, L, Girotto, S, Bisaglia, M, Tessari, I, Mammi, S, Zanotti, G, Bubacco, L. Deposit date: 2013-09-19 Release date: 2014-03-05 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (1.47 Å) Cite: DJ-1 Is a Copper Chaperone Acting on SOD1 Activation. J.Biol.Chem., 289, 2014
6U4R	Crystal structure of Equine Serum Albumin complex with ketoprofen Descriptor: (2S)-2-[3-(benzenecarbonyl)phenyl]propanoic acid, SULFATE ION, Serum albumin, ... Authors: Czub, M.P, Handing, K.B, Shabalin, I.G, Satchell, K.J, Joachimiak, A, Minor, W, Center for Structural Genomics of Infectious Diseases (CSGID) Deposit date: 2019-08-26 Release date: 2019-09-04 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (2.45 Å) Cite: Albumin-Based Transport of Nonsteroidal Anti-Inflammatory Drugs in Mammalian Blood Plasma. J.Med.Chem., 63, 2020
8JOZ	Crystal structure of CmoM from E. coli complexed with sinefungin and cellularly expressed tRNA Ser Descriptor: MAGNESIUM ION, SINEFUNGIN, tRNA 5-carboxymethoxyuridine methyltransferase, ... Authors: Yoo, J, Kim, J. Deposit date: 2023-06-09 Release date: 2023-08-30 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (2.22 Å) Cite: Structural basis for the selective methylation of 5-carboxymethoxyuridine in tRNA modification. Nucleic Acids Res., 51, 2023
6EJA	Human Xylosyltransferase 1 in complex with peptide QEEEYSGGGQGG Descriptor: Protein AMBP, SODIUM ION, Xylosyltransferase 1 Authors: Briggs, D.C, Hohenester, E. Deposit date: 2017-09-20 Release date: 2018-05-02 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (1.94 Å) Cite: Structural Basis for the Initiation of Glycosaminoglycan Biosynthesis by Human Xylosyltransferase 1. Structure, 26, 2018
6UJW	P-glycoprotein mutant-Y306A and C952A-with BDE100 Descriptor: 2,4-dibromophenyl 2,4,6-tribromophenyl ether, ATP-dependent translocase ABCB1 Authors: Aller, S.G, Le, C.A. Deposit date: 2019-10-03 Release date: 2020-05-27 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (4.15 Å) Cite: Structural definition of polyspecific compensatory ligand recognition by P-glycoprotein. Iucrj, 7, 2020
6EJ9	Human Xylosyltransferase 1 in complex with peptide QEPEGSGGGQGG Descriptor: PHOSPHATE ION, Protein AMBP, SODIUM ION, ... Authors: Briggs, D.C, Hohenester, E. Deposit date: 2017-09-20 Release date: 2018-05-02 Last modified: 2024-10-16 Method: X-RAY DIFFRACTION (2.02 Å) Cite: Structural Basis for the Initiation of Glycosaminoglycan Biosynthesis by Human Xylosyltransferase 1. Structure, 26, 2018
8R6H	A quadruplex-duplex hybrid with a three-layered hybrid-2 G-quadruplex topology complexed with Phen-DC3 Descriptor: DNA (34-MER), N2,N9-bis(1-methylquinolin-3-yl)-1,10-phenanthroline-2,9-dicarboxamide Authors: Vianney, Y.M, Weisz, K. Deposit date: 2023-11-22 Release date: 2024-03-06 Last modified: 2024-07-10 Method: SOLUTION NMR Cite: Structural Differences at Quadruplex-Duplex Interfaces Enable Ligand-Induced Topological Transitions. Adv Sci, 11, 2024
6ENF	Cryo-EM structure of a polyproline-stalled ribosome in the absence of EF-P Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Huter, P, Arenz, S, Wilson, D.N. Deposit date: 2017-10-04 Release date: 2017-11-22 Last modified: 2024-10-23 Method: ELECTRON MICROSCOPY (3.2 Å) Cite: Structural Basis for Polyproline-Mediated Ribosome Stalling and Rescue by the Translation Elongation Factor EF-P. Mol. Cell, 68, 2017
8JZ7	Cryo-EM structure of MK-6892-bound HCAR2 in complex with Gi protein Descriptor: 2-[[2,2-dimethyl-3-[3-(5-oxidanylpyridin-2-yl)-1,2,4-oxadiazol-5-yl]propanoyl]amino]cyclohexene-1-carboxylic acid, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ... Authors: Zhao, C, Tian, X.W, Liu, Y, Cheng, L, Yan, W, Shao, Z.H. Deposit date: 2023-07-04 Release date: 2023-10-04 Method: ELECTRON MICROSCOPY (2.6 Å) Cite: Orthosteric ligand selectivity and allosteric probe dependence at Hydroxycarboxylic acid receptor HCAR2. Signal Transduct Target Ther, 8, 2023
6UJC	Integrin alpha-v beta-8 in complex with the Fabs C6-RGD3 and 11D12v2 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, C6-RGD3 heavy chain Fab, ... Authors: Campbell, M.G, Cormier, A, Cheng, Y, Nishimura, S.L. Deposit date: 2019-10-02 Release date: 2020-02-05 Last modified: 2024-10-16 Method: ELECTRON MICROSCOPY (3.56 Å) Cite: Cryo-EM Reveals Integrin-Mediated TGF-beta Activation without Release from Latent TGF-beta. Cell, 180, 2020
8K5C	Cryo-EM structure of Acipimox bound human hydroxy-carboxylic acid receptor 2 (Local refinement) Descriptor: 5-methyl-4-oxidanyl-pyrazin-4-ium-2-carboxylic acid, Human hydroxycarboxylic acid receptor 2 Authors: Park, J.H, Ishimoto, N, Park, S.Y. Deposit date: 2023-07-21 Release date: 2023-11-22 Last modified: 2024-05-08 Method: ELECTRON MICROSCOPY (3.13 Å) Cite: Structural basis for ligand recognition and signaling of hydroxy-carboxylic acid receptor 2. Nat Commun, 14, 2023
8K5B	Cryo-EM structure of niacin bound human hydroxy-carboxylic acid receptor 2 (Local refinement) Descriptor: Human Hydroxycarboxylic acid receptor 2, NICOTINIC ACID Authors: Park, J.H, Ishimoto, N, Park, S.Y. Deposit date: 2023-07-21 Release date: 2023-11-22 Last modified: 2024-05-08 Method: ELECTRON MICROSCOPY (3.43 Å) Cite: Structural basis for ligand recognition and signaling of hydroxy-carboxylic acid receptor 2. Nat Commun, 14, 2023
8K5D	Cryo-EM structure of GSK256073 bound human hydroxy-carboxylic acid receptor 2 (Local refinement) Descriptor: 8-chloranyl-3-pentyl-7H-purine-2,6-dione, Human hydroxycarboxylic acid receptor 2 Authors: Park, J.H, Ishimoto, N, Park, S.Y. Deposit date: 2023-07-21 Release date: 2023-11-22 Last modified: 2024-05-08 Method: ELECTRON MICROSCOPY (3.74 Å) Cite: Structural basis for ligand recognition and signaling of hydroxy-carboxylic acid receptor 2. Nat Commun, 14, 2023
8KG8	Yeast replisome in state II Descriptor: ADENOSINE-5'-DIPHOSPHATE, Cell division control protein 45, DNA (61-mer), ... Authors: Dang, S, Zhai, Y, Feng, J, Yu, D, Xu, Z. Deposit date: 2023-08-17 Release date: 2023-12-06 Method: ELECTRON MICROSCOPY (4.23 Å) Cite: Synergism between CMG helicase and leading strand DNA polymerase at replication fork. Nat Commun, 14, 2023
3LLP	1.8 Angstrom human fascin 1 crystal structure Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, BROMIDE ION, Fascin, ... Authors: Chen, L, Yang, S, Jakoncic, J, Zhang, J.J, Huang, X.-Y. Deposit date: 2010-01-29 Release date: 2010-04-07 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Migrastatin analogues target fascin to block tumour metastasis. Nature, 464, 2010
3QBV	Structure of designed orthogonal interaction between CDC42 and nucleotide exchange domains of intersectin Descriptor: Cell division control protein 42 homolog, GUANOSINE-5'-DIPHOSPHATE, Intersectin-1 Authors: Kapp, G.T, Remenyi, A, Lim, W.A, Kortemme, T. Deposit date: 2011-01-14 Release date: 2012-02-08 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.65 Å) Cite: Control of protein signaling using a computationally designed GTPase/GEF orthogonal pair. Proc.Natl.Acad.Sci.USA, 109, 2012
7EN2	Pyochelin synthetase, a dimeric nonribosomal peptide synthetase elongation module-after-condensation, condensation Descriptor: 4'-PHOSPHOPANTETHEINE, ADENOSINE MONOPHOSPHATE, Dihydroaeruginoic acid synthetase Authors: Wang, J.L, Wang, Z.J. Deposit date: 2021-04-15 Release date: 2021-12-22 Last modified: 2023-07-05 Method: ELECTRON MICROSCOPY (3.78 Å) Cite: Catalytic trajectory of a dimeric nonribosomal peptide synthetase subunit with an inserted epimerase domain. Nat Commun, 13, 2022
7EMY	Pyochelin synthetase, a dimeric nonribosomal peptide synthetase elongation module Descriptor: 2-HYDROXYBENZOIC ACID, 4'-PHOSPHOPANTETHEINE, ADENOSINE MONOPHOSPHATE, ... Authors: Wang, J.L, Wang, Z.J. Deposit date: 2021-04-15 Release date: 2021-12-22 Last modified: 2023-07-05 Method: ELECTRON MICROSCOPY (2.97 Å) Cite: Catalytic trajectory of a dimeric nonribosomal peptide synthetase subunit with an inserted epimerase domain. Nat Commun, 13, 2022
7EN1	Pyochelin synthetase, a dimeric nonribosomal peptide synthetase elongation module-after-condensation Descriptor: (4S)-2-(2-hydroxyphenyl)-4,5-dihydro-1,3-thiazole-4-carboxylic acid, 2-HYDROXYBENZOIC ACID, 4'-PHOSPHOPANTETHEINE, ... Authors: Wang, J.L, Wang, Z.J. Deposit date: 2021-04-15 Release date: 2021-12-22 Last modified: 2023-07-05 Method: ELECTRON MICROSCOPY (3.47 Å) Cite: Catalytic trajectory of a dimeric nonribosomal peptide synthetase subunit with an inserted epimerase domain. Nat Commun, 13, 2022
8R6D	A quadruplex-duplex hybrid with a three-layered hybrid-2 G-quadruplex topology Descriptor: DNA (31-MER) Authors: Vianney, Y.M, Weisz, K. Deposit date: 2023-11-22 Release date: 2024-03-06 Last modified: 2024-07-10 Method: SOLUTION NMR Cite: Structural Differences at Quadruplex-Duplex Interfaces Enable Ligand-Induced Topological Transitions. Adv Sci, 11, 2024
8R6G	A quadruplex-duplex hybrid with a three-layered chair G-quadruplex topology Descriptor: DNA (33-MER) Authors: Vianney, Y.M, Weisz, K. Deposit date: 2023-11-22 Release date: 2024-03-13 Last modified: 2024-07-10 Method: SOLUTION NMR Cite: Structural Differences at Quadruplex-Duplex Interfaces Enable Ligand-Induced Topological Transitions. Adv Sci, 11, 2024
3CF6	Structure of Epac2 in complex with cyclic-AMP and Rap Descriptor: 6-(6-AMINO-PURIN-9-YL)-2-THIOXO-TETRAHYDRO-2-FURO[3,2-D][1,3,2]DIOXAPHOSPHININE-2,7-DIOL, Rap guanine nucleotide exchange factor (GEF) 4, Ras-related protein Rap-1b, ... Authors: Rehmann, H, Arias-Palomo, E, Hadders, M.A, Schwede, F, Llorca, O, Bos, J.L. Deposit date: 2008-03-02 Release date: 2008-07-29 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Structure of Epac2 in complex with a cyclic AMP analogue and RAP1B Nature, 455, 2008
3F2W	Crystal structure of the FMn riboswitch bound to FMN, Ba2+ soak. Descriptor: BARIUM ION, FLAVIN MONONUCLEOTIDE, FMN riboswitch, ... Authors: Serganov, A.A, Huang, L. Deposit date: 2008-10-30 Release date: 2009-01-27 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (3.45 Å) Cite: Coenzyme recognition and gene regulation by a flavin mononucleotide riboswitch. Nature, 458, 2009

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