PDB: 48062 件ウェブページステータス検索Chemie searchBIRD

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7B69	BK Polyomavirus VP1 pentamer core(residues 26-299) mutant C104S 分子名称: DIMETHYL SULFOXIDE, Major capsid protein VP1 著者 Osipov, E.M, Beelen, S, Strelkov, S.V. 登録日 2020-12-07 公開日 2022-06-22 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.474 Å) 主引用文献 Discovery of novel druggable pockets on polyomavirus VP1 through crystallographic fragment-based screening to develop capsid assembly inhibitors. Rsc Chem Biol, 3, 2022
6MFH	Mutated Uronate Dehydrogenase 分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, Mutated Uronate Dehydrogenase, PHOSPHATE ION 著者 Sankaran, B, Pereira, J.H, Chan, V, Zwart, P.H, Wagschal, K. 登録日 2018-09-11 公開日 2019-09-11 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.04 Å) 主引用文献 Chromohalobacter salixigens uronate dehydrogenase: Directed evolution for improved thermal stability and mutant CsUDH-inc X-ray crystal structure Process Biochem, 2020
7B6C	BK Polyomavirus VP1 pentamer fusion with long C-terminal extended arm 分子名称: CALCIUM ION, DIMETHYL SULFOXIDE, Major capsid protein VP1,Major capsid protein VP1 著者 Osipov, E.M, Beelen, S, Strelkov, S.V. 登録日 2020-12-07 公開日 2022-06-22 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.484 Å) 主引用文献 Discovery of novel druggable pockets on polyomavirus VP1 through crystallographic fragment-based screening to develop capsid assembly inhibitors. Rsc Chem Biol, 3, 2022
6U0M	Structure of the S. cerevisiae replicative helicase CMG in complex with a forked DNA 分子名称: ADENOSINE-5'-TRIPHOSPHATE, Cell division control protein 45, DNA (15-MER), ... 著者 Yuan, Z, Georgescu, R, Bai, L, Zhang, D, O'Donnell, M, Li, H. 登録日 2019-08-14 公開日 2020-03-25 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 DNA unwinding mechanism of a eukaryotic replicative CMG helicase. Nat Commun, 11, 2020
6TVL	Hen Egg White Lysozyme in complex with a "half sandwich"-type Ru(II) coordination compound 分子名称: CHLORIDE ION, Lysozyme C, SODIUM ION, ... 著者 Chiniadis, L, Giastas, P, Bratsos, I, Papakyriakou, A. 登録日 2020-01-10 公開日 2020-04-29 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.395 Å) 主引用文献 High-resolution crystal structures of a "half sandwich"-type Ru(II) coordination compound bound to hen egg-white lysozyme and proteinase K. J.Biol.Inorg.Chem., 25, 2020
6FIZ	Crystal Structure of CNG mimicking NaK-EAPP mutant (T67A) cocrystallized with K+ 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, GLYCINE, POTASSIUM ION, ... 著者 Napolitano, L.M.R, De March, M, Steiner, R.A, Onesti, S. 登録日 2018-01-19 公開日 2019-03-06 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.63 Å) 主引用文献 Crystal Structure of CNG mimicking NaK-EAPP mutant (T67A) cocrystallized with K+ To Be Published
7N6E	TCR peptide HLA-A2 complex 分子名称: Beta-2-microglobulin, MHC class I antigen, Spike protein S1, ... 著者 Chaurasia, P, Rossjohn, J, Petersen, J. 登録日 2021-06-08 公開日 2021-07-28 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Structural basis of biased T cell receptor recognition of an immunodominant HLA-A2 epitope of the SARS-CoV-2 spike protein. J.Biol.Chem., 297, 2021
6MX2	Crystal Structure of ClpP1 from Clostridium difficile 630. 分子名称: ATP-dependent Clp protease proteolytic subunit, GLYCEROL, SODIUM ION 著者 Lavey, N.P, Thomas, L.M, Duerfeldt, A.S. 登録日 2018-10-30 公開日 2018-11-14 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Crystal Structure of ClpP1 from Clostridium difficile 630. To Be Published
8K74	A novel monooxygenase 分子名称: Alkanal monooxygenase alpha chain 著者 Ma, D, Feng, R. 登録日 2023-07-26 公開日 2024-07-31 実験手法 X-RAY DIFFRACTION (1.97 Å) 主引用文献 Functional and structural analysis of monooxygenase in polyacrylamide degraded by Klebsiella sp. PCX To Be Published
8K60	Cryo-EM structure of Streptomyces coelicolor transcription initiation complex with the global transcription factor AfsR 分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... 著者 Lin, W, Shi, J. 登録日 2023-07-24 公開日 2024-07-31 最終更新日 2024-08-21 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structural insights into transcription activation of the Streptomyces antibiotic regulatory protein, AfsR. Iscience, 27, 2024
6VQH	Mammalian V-ATPase from rat brain membrane-embedded Vo region rotational state 3 (from focused refinement) 分子名称: ATPase H+-transporting V1 subunit D, ATPase, H+ transporting, ... 著者 Abbas, Y.M, Rubinstein, J.L. 登録日 2020-02-05 公開日 2020-03-18 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (4.4 Å) 主引用文献 Structure of V-ATPase from the mammalian brain. Science, 367, 2020
2HI4	Crystal Structure of Human Microsomal P450 1A2 in complex with alpha-naphthoflavone 分子名称: 2-PHENYL-4H-BENZO[H]CHROMEN-4-ONE, Cytochrome P450 1A2, PROTOPORPHYRIN IX CONTAINING FE 著者 Sansen, S, Yano, J.K, Reynald, R.L, Schoch, G.S, Stout, C.D, Johnson, E.F. 登録日 2006-06-29 公開日 2007-02-20 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Adaptations for the oxidation of polycyclic aromatic hydrocarbons exhibited by the structure of human P450 1A2. J.Biol.Chem., 282, 2007
6W21	ClpAP Engaged2 State bound to RepA-GFP 分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpA, ... 著者 Lopez, K.L, Rizo, A.N, Tse, E, Lin, J, Scull, N.W, Thwin, A.C, Lucius, A.L, Shorter, J, Southworth, D.R. 登録日 2020-03-04 公開日 2020-05-13 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Conformational plasticity of the ClpAP AAA+ protease couples protein unfolding and proteolysis. Nat.Struct.Mol.Biol., 27, 2020
2HK0	Crystal structure of D-psicose 3-epimerase (DPEase) in the absence of substrate 分子名称: D-PSICOSE 3-EPIMERASE 著者 Kim, K, Kim, H.J, Oh, D.K, Cha, S.S, Rhee, S. 登録日 2006-07-03 公開日 2006-08-29 最終更新日 2017-10-18 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal Structure of d-Psicose 3-epimerase from Agrobacterium tumefaciens and its Complex with True Substrate d-Fructose: A Pivotal Role of Metal in Catalysis, an Active Site for the Non-phosphorylated Substrate, and its Conformational Changes J.Mol.Biol., 361, 2006
7B75	Cryo-EM Structure of Human Thyroglobulin 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Thyroglobulin, ... 著者 Adaixo, R, Righetto, R, Steiner, E.M, Taylor, N.M.I, Stahlberg, H. 登録日 2020-12-09 公開日 2021-12-29 最終更新日 2024-10-16 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Cryo-EM structure of native human thyroglobulin. Nat Commun, 13, 2022
6VJS	Escherichia coli RNA polymerase and ureidothiophene-2-carboxylic acid complex 分子名称: 3-{[benzyl(ethyl)carbamoyl]amino}-5-(4-phenoxyphenyl)thiophene-2-carboxylic acid, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... 著者 Murakami, K.S, Molodtsov, V. 登録日 2020-01-17 公開日 2020-10-07 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (4.02 Å) 主引用文献 Evaluation of Bacterial RNA Polymerase Inhibitors in a Staphylococcus aureus -Based Wound Infection Model in SKH1 Mice. Acs Infect Dis., 6, 2020
6MKN	Structure of the Thermus thermophilus 30S ribosomal subunit complexed with an inosine (I34) modified anticodon stem loop (ASL) of Escherichia coli transfer RNA Arginine 2 (TRNAARG2) bound to an mRNA with an CGU-codon in the A-site and paromomycin 分子名称: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 Cantara, W.A, DeMirci, H, Agris, P.F. 登録日 2018-09-25 公開日 2019-04-24 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (3.46 Å) 主引用文献 A Structural Basis for Restricted Codon Recognition Mediated by 2-thiocytidine in tRNA Containing a Wobble Position Inosine. J.Mol.Biol., 432, 2020
2HR7	Insulin receptor (domains 1-3) 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Garrett, T.P.J, Ward, C.W. 登録日 2006-07-19 公開日 2006-08-15 最終更新日 2024-10-09 実験手法 X-RAY DIFFRACTION (2.32 Å) 主引用文献 The first three domains of the insulin receptor differ structurally from the insulin-like growth factor 1 receptor in the regions governing ligand specificity. Proc.Natl.Acad.Sci.Usa, 103, 2006
6VKL	Negative stain reconstruction of the yeast exocyst octameric complex. 分子名称: Exocyst complex component EXO70, Exocyst complex component EXO84, Exocyst complex component SEC10, ... 著者 Frost, A, Munson, M. 登録日 2020-01-21 公開日 2020-07-29 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (15 Å) 主引用文献 Exocyst structural changes associated with activation of tethering downstream of Rho/Cdc42 GTPases. J. Cell Biol., 219, 2020
8JD5	Cryo-EM structure of Gi1-bound mGlu2-mGlu4 heterodimer 分子名称: 1-butyl-3-chloranyl-4-(4-phenylpiperidin-1-yl)pyridin-2-one, 2-acetamido-2-deoxy-beta-D-glucopyranose, 5-methyl-N-(4-methylpyrimidin-2-yl)-4-(1H-pyrazol-4-yl)-1,3-thiazol-2-amine, ... 著者 Wang, X, Wang, M, Xu, T, Feng, Y, Han, S, Zhao, Q, Wu, B. 登録日 2023-05-12 公開日 2023-06-21 最終更新日 2024-10-16 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Structural insights into dimerization and activation of the mGlu2-mGlu3 and mGlu2-mGlu4 heterodimers. Cell Res., 33, 2023
8JD3	Cryo-EM structure of Gi1-bound mGlu2-mGlu3 heterodimer 分子名称: 1-butyl-3-chloranyl-4-(4-phenylpiperidin-1-yl)pyridin-2-one, CHOLESTEROL, DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE, ... 著者 Wang, X, Wang, M, Xu, T, Feng, Y, Han, S, Lin, S, Zhao, Q, Wu, B. 登録日 2023-05-12 公開日 2023-06-21 最終更新日 2023-10-18 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Structural insights into dimerization and activation of the mGlu2-mGlu3 and mGlu2-mGlu4 heterodimers. Cell Res., 33, 2023
6MTP	Crystal structure of VRC42.04 Fab in complex with gp41 peptide 分子名称: Antibody VRC42.04 Fab heavy chain, Antibody VRC42.04 Fab light chain, RV217 founder virus gp41 peptide 著者 Kwon, Y.D, Druz, A, Law, W.H, Peng, D, Zhang, B, Doria-Rose, N.A, Kwong, P.D. 登録日 2018-10-21 公開日 2019-03-27 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (2.036 Å) 主引用文献 Longitudinal Analysis Reveals Early Development of Three MPER-Directed Neutralizing Antibody Lineages from an HIV-1-Infected Individual. Immunity, 50, 2019
2GP1	Bacteriophage HK97 Prohead II crystal structure 分子名称: Major capsid protein 著者 Gertsman, I, Gan, L, Johnson, J.E. 登録日 2006-04-15 公開日 2006-05-02 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (5.2 Å) 主引用文献 Structure and Flexibility of Bacteriophage HK97 Pre-expanded State Prohead II To be Published
2GRZ	5ns Photoproduct of the M37V mutant of Scapharca HbI 分子名称: CARBON MONOXIDE, Globin-1, PROTOPORPHYRIN IX CONTAINING FE 著者 Knapp, J.E, Pahl, R, Srajer, V, Royer Jr, W.E. 登録日 2006-04-25 公開日 2006-05-09 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Allosteric action in real time: Time-resolved crystallographic studies of a cooperative dimeric hemoglobin. Proc.Natl.Acad.Sci.Usa, 103, 2006
6FLQ	CryoEM structure of E.coli RNA polymerase paused elongation complex bound to NusA 分子名称: DNA (31-MER), DNA (39-MER), DNA-directed RNA polymerase subunit alpha, ... 著者 Guo, X, Weixlbaumer, A. 登録日 2018-01-26 公開日 2018-03-21 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Structural Basis for NusA Stabilized Transcriptional Pausing. Mol. Cell, 69, 2018

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