PDB: 47065 件ウェブページステータス検索Chemie searchBIRD

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1XI5	Clathrin D6 coat with auxilin J-domain 分子名称: Auxilin J-domain, Clathrin heavy chain 著者 Fotin, A, Cheng, Y, Grigorieff, N, Walz, T, Harrison, S.C, Kirchhausen, T. 登録日 2004-09-21 公開日 2004-11-02 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (12 Å) 主引用文献 Structure of an auxilin-bound clathrin coat and its implications for the mechanism of uncoating Nature, 432, 2004
4Q37	Crystal structure of the hypothetical protein TM0182 Thermotoga maritima, N-terminal domain. 分子名称: PLATINUM (II) ION, Radical SAM protein 著者 Hocker, B, Farias-Rico, J.A. 登録日 2014-04-11 公開日 2014-07-16 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (3.19 Å) 主引用文献 Evolutionary relationship of two ancient protein superfolds. Nat.Chem.Biol., 10, 2014
3J9Z	Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Li, W, Liu, Z, Koripella, R.K, Langlois, R, Sanyal, S, Frank, J. 登録日 2015-03-27 公開日 2015-07-01 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Activation of GTP hydrolysis in mRNA-tRNA translocation by elongation factor G. Sci Adv, 1, 2015
1XM8	X-RAY STRUCTURE OF GLYOXALASE II FROM ARABIDOPSIS THALIANA GENE AT2G31350 分子名称: ACETIC ACID, DI(HYDROXYETHYL)ETHER, FE (III) ION, ... 著者 Wesenberg, G.E, Smith, D.W, Phillips Jr, G.N, Bitto, E, Bingman, C.A, Allard, S.T.M, Center for Eukaryotic Structural Genomics (CESG) 登録日 2004-10-01 公開日 2004-10-12 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.74 Å) 主引用文献 Structural studies on a mitochondrial glyoxalase II. J.Biol.Chem., 280, 2005
4QLQ	yCP in complex with tripeptidic epoxyketone inhibitor 8 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, MAGNESIUM ION, N-(morpholin-4-ylacetyl)-L-alanyl-N-[(2S,4R)-1-cyclohexyl-5-hydroxy-4-methyl-3-oxopentan-2-yl]-O-methyl-L-tyrosinamide, ... 著者 De Bruin, G, Huber, E, Xin, B, Van Rooden, E, Al-Ayed, K, Kim, K, Kisselev, A, Driessen, C, Van der Marel, G, Groll, M, Overkleeft, H. 登録日 2014-06-13 公開日 2014-07-23 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structure-based design of beta 1i or beta 5i specific inhibitors of human immunoproteasomes J.Med.Chem., 57, 2014
3OOH	Crystal structure of E. Coli purine nucleoside phosphorylase with PO4 分子名称: PHOSPHATE ION, Purine nucleoside phosphorylase deoD-type 著者 Mikleusevic, G, Stefanic, Z, Narzyk, M, Wielgus-Kutrowska, B, Bzowska, A, Luic, M. 登録日 2010-08-31 公開日 2011-07-13 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Validation of the catalytic mechanism of Escherichia coli purine nucleoside phosphorylase by structural and kinetic studies. Biochimie, 93, 2011
3JBT	Atomic structure of the Apaf-1 apoptosome 分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, Apoptotic protease-activating factor 1, Cytochrome c, ... 著者 Zhou, M, Li, Y, Hu, Q, Bai, X, Huang, W, Yan, C, Scheres, S.H.W, Shi, Y. 登録日 2015-10-15 公開日 2015-11-18 最終更新日 2019-12-18 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Atomic structure of the apoptosome: mechanism of cytochrome c- and dATP-mediated activation of Apaf-1 Genes Dev., 29, 2015
3JCD	Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4) 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Zhang, D, Yan, K, Liu, G, Song, G, Luo, J, Shi, Y, Cheng, E, Wu, S, Jiang, T, Low, J, Gao, N, Qin, Y. 登録日 2015-12-01 公開日 2016-01-13 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 EF4 disengages the peptidyl-tRNA CCA end and facilitates back-translocation on the 70S ribosome Nat. Struct. Mol. Biol., 23, 2016
3J6Y	S. cerevisiae 80S ribosome bound with Taura syndrome virus (TSV) IRES, 2 degree rotation (Class I) 分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0, ... 著者 Koh, C.S, Brilot, A.F, Grigorieff, N, Korostelev, A.A. 登録日 2014-04-16 公開日 2014-06-11 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (6.1 Å) 主引用文献 Taura syndrome virus IRES initiates translation by binding its tRNA-mRNA-like structural element in the ribosomal decoding center. Proc.Natl.Acad.Sci.USA, 111, 2014
4FJV	Crystal Structure of Human Otubain2 and Ubiquitin Complex 分子名称: ETHANAMINE, GLYCEROL, Polyubiquitin-C, ... 著者 Altun, M, Walter, T.S, Kramer, H.B, Iphofer, A, David, Y, Komsany, A, Ternette, N, Nicholson, B, Navon, A, Stuart, D.I, Ren, J, Kessler, B.M. 登録日 2012-06-12 公開日 2013-06-12 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.047 Å) 主引用文献 The human otubain2-ubiquitin structure provides insights into the cleavage specificity of poly-ubiquitin-linkages. Plos One, 10, 2015
1XRF	The Crystal Structure of a Novel, Latent Dihydroorotase from Aquifex aeolicus at 1.7 A resolution 分子名称: Dihydroorotase, SULFATE ION, ZINC ION 著者 Martin, P.D, Purcarea, C, Zhang, P, Vaishnav, A, Sadecki, S, Guy-Evans, H.I, Evans, D.R, Edwards, B.F. 登録日 2004-10-14 公開日 2005-07-05 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 The crystal structure of a novel, latent dihydroorotase from Aquifex aeolicus at 1.7A resolution J.Mol.Biol., 348, 2005
7A08	CryoEM Structure of cGAS Nucleosome complex 分子名称: Cyclic GMP-AMP synthase, Histone H2A type 1-C, Histone H2B type 1-C/E/F/G/I, ... 著者 Michalski, S, de Oliveira Mann, C.C, Witte, G, Bartho, J, Lammens, K, Hopfner, K.P. 登録日 2020-08-07 公開日 2020-09-23 最終更新日 2021-02-10 実験手法 ELECTRON MICROSCOPY (3.11 Å) 主引用文献 Structural basis for sequestration and autoinhibition of cGAS by chromatin. Nature, 587, 2020
3KA2	Crystal structure of chemically synthesized 203 amino acid 'covalent dimer' [L-Ala;Gly51']HIV-1 protease molecule complexed with MVT-101 reduced isostere inhibitor at 1.4 A resolution 分子名称: N-{(2S)-2-[(N-acetyl-L-threonyl-L-isoleucyl)amino]hexyl}-L-norleucyl-L-glutaminyl-N~5~-[amino(iminio)methyl]-L-ornithinamide, [L-Ala51;Gly51']HIV-1 protease 著者 Torbeev, V.Y, Kent, S.B.H. 登録日 2009-10-18 公開日 2011-04-27 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Protein conformational dynamics in the mechanism of HIV-1 protease catalysis. Proc.Natl.Acad.Sci.USA, 108, 2011
1XJ6	Structure of bjFixLH in the unliganded ferrous form 分子名称: CHLORIDE ION, PROTOPORPHYRIN IX CONTAINING FE, SODIUM ION, ... 著者 Key, J, Moffat, K. 登録日 2004-09-22 公開日 2005-03-29 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal Structures of Deoxy and CO-Bound bjFixLH Reveal Details of Ligand Recognition and Signaling Biochemistry, 44, 2005
3JBV	Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps 分子名称: 30S ribosomal protein S10, 30S ribosomal protein S11, 30S ribosomal protein S12, ... 著者 Zhang, J, Pan, X.J, Yan, K.G, Sun, S, Gao, N, Sui, S.F. 登録日 2015-10-16 公開日 2016-01-27 最終更新日 2023-12-27 実験手法 ELECTRON MICROSCOPY (3.32 Å) 主引用文献 Mechanisms of ribosome stalling by SecM at multiple elongation steps Elife, 4, 2015
1X8P	0.85 A Crystal Structure Of Nitrophorin 4 From Rhodnius Prolixus Complexed With Ammonia at pH 7.4 分子名称: AMMONIA, Nitrophorin 4, PROTOPORPHYRIN IX CONTAINING FE 著者 Kondrashov, D.A, Roberts, S.A, Weichsel, A, Montfort, W.R. 登録日 2004-08-18 公開日 2004-10-05 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (0.85 Å) 主引用文献 Protein functional cycle viewed at atomic resolution: conformational change and mobility in nitrophorin 4 as a function of pH and NO binding Biochemistry, 43, 2004
3OOF	Crystal structure of human FXR in complex with 4-({(2S)-2-[2-(4-chlorophenyl)-5,6-difluoro-1H-benzimidazol-1-yl]-2-cyclohexylacetyl}amino)benzoic acid 分子名称: 4-({(2S)-2-[2-(4-chlorophenyl)-5,6-difluoro-1H-benzimidazol-1-yl]-2-cyclohexylacetyl}amino)benzoic acid, Bile acid receptor, peptide of Nuclear receptor coactivator 1 著者 Rudolph, M.G. 登録日 2010-08-31 公開日 2011-01-19 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.29 Å) 主引用文献 Optimization of a novel class of benzimidazole-based farnesoid X receptor (FXR) agonists to improve physicochemical and ADME properties Bioorg.Med.Chem.Lett., 21, 2011
6ZNL	Cryo-EM structure of the dynactin complex 分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ARP1 actin related protein 1 homolog A, ... 著者 Lau, C.K, Lacey, S.E, Carter, A.P. 登録日 2020-07-06 公開日 2020-07-29 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Cryo-EM reveals the complex architecture of dynactin's shoulder region and pointed end. Embo J., 40, 2021
3JBO	Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to P/E-tRNA 分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein eS1, ... 著者 Sun, M, Li, W, Blomqvist, K, Das, S, Hashem, Y, Dvorin, J.D, Frank, J. 登録日 2015-09-16 公開日 2015-10-14 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (5.8 Å) 主引用文献 Dynamical features of the Plasmodium falciparum ribosome during translation. Nucleic Acids Res., 43, 2015
3OX2	X-ray Structural study of quinone reductase II inhibition by compounds with micromolar to nanomolar range IC50 values 分子名称: 2-hydroxy-8,9-dimethoxy-6H-isoindolo[2,1-a]indol-6-one, FLAVIN-ADENINE DINUCLEOTIDE, Ribosyldihydronicotinamide dehydrogenase [quinone], ... 著者 Pegan, S.D, Sturdy, M, Mesecar, A.D. 登録日 2010-09-21 公開日 2011-05-25 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.41 Å) 主引用文献 X-ray structural studies of quinone reductase 2 nanomolar range inhibitors. Protein Sci., 20, 2011
3J7A	Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine, small subunit 分子名称: 18S ribosomal RNA, 40S ribosomal protein eS1, 40S ribosomal protein eS10, ... 著者 Wong, W, Bai, X.C, Brown, A, Fernandez, I.S, Hanssen, E, Condron, M, Tan, Y.H, Baum, J, Scheres, S.H.W. 登録日 2014-06-03 公開日 2014-07-16 最終更新日 2018-07-18 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine. Elife, 3, 2014
3J81	CryoEM structure of a partial yeast 48S preinitiation complex 分子名称: 18S rRNA, MAGNESIUM ION, METHIONINE, ... 著者 Hussain, T, Llacer, J.L, Fernandez, I.S, Savva, C.G, Ramakrishnan, V. 登録日 2014-08-29 公開日 2014-11-05 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 Structural changes enable start codon recognition by the eukaryotic translation initiation complex. Cell(Cambridge,Mass.), 159, 2014
5MD3	The structure of the mature HIV-1 CA hexameric lattice with curvature parameters: tilt=11, twist=12 分子名称: Capsid protein p24 著者 Mattei, S, Glass, B, Hagen, W.J.H, Kraeusslich, H.-G, Briggs, J.A.G. 登録日 2016-11-10 公開日 2016-12-28 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (8.5 Å) 主引用文献 The structure and flexibility of conical HIV-1 capsids determined within intact virions. Science, 354, 2016
5MDE	The structure of the mature HIV-1 CA hexameric lattice with curvature parameters: tilt=23, twist=0 分子名称: Capsid protein p24 C-terminal domain, Capsid protein p24 N-terminal domain 著者 Mattei, S, Glass, B, Hagen, W.J.H, Kraeusslich, H.-G, Briggs, J.A.G. 登録日 2016-11-10 公開日 2016-12-28 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (8.4 Å) 主引用文献 The structure and flexibility of conical HIV-1 capsids determined within intact virions. Science, 354, 2016
1YRT	Crystal Structure analysis of the adenylyl cyclaes catalytic domain of adenylyl cyclase toxin of Bordetella pertussis in presence of c-terminal calmodulin 分子名称: Bifunctional hemolysin-adenylate cyclase, CALCIUM ION, Calmodulin 著者 Guo, Q, Shen, Y, Lee, Y.S, Gibbs, C.S, Mrksich, M, Tang, W.J. 登録日 2005-02-04 公開日 2006-01-17 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structural basis for the interaction of Bordetella pertussis adenylyl cyclase toxin with calmodulin. Embo J., 24, 2005

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