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7UMW
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Crystal structure of E. Coli FabI in complex with NAD and Fabimycin ((S,E)-3-(7-amino-8-oxo-6,7,8,9-tetrahydro-5H-pyrido[2,3-b]azepin-3-yl)-N-methyl-N-((3-methylbenzofuran-2-yl)methyl)acrylamide)
分子名称: (2E)-3-[(7S)-7-amino-8-oxo-6,7,8,9-tetrahydro-5H-pyrido[2,3-b]azepin-3-yl]-N-methyl-N-[(3-methyl-1-benzofuran-2-yl)methyl]prop-2-enamide, Enoyl-[acyl-carrier-protein] reductase [NADH] FabI, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Hajian, B.
登録日2022-04-08
公開日2022-12-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献An Iterative Approach Guides Discovery of the FabI Inhibitor Fabimycin, a Late-Stage Antibiotic Candidate with In Vivo Efficacy against Drug-Resistant Gram-Negative Infections
Acs Cent.Sci., 8, 2022
7UTB
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KPC-2 CARBAPENEMASE IN COMPLEX WITH THE BORONIC ACID INHIBITOR MB_076
分子名称: Carbapenem-hydrolyzing beta-lactamase KPC, [(1~{R})-1-[2-[(5-azanyl-1,3,4-thiadiazol-2-yl)sulfanyl]ethanoylamino]-2-(4-carboxy-1,2,3-triazol-1-yl)ethyl]-$l^{3}-oxidanyl-bis(oxidanyl)boron
著者van den Akker, F, Alsenani, T.A.
登録日2022-04-26
公開日2022-12-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.38 Å)
主引用文献Boronic Acid Transition State Inhibitors as Potent Inactivators of KPC and CTX-M beta-Lactamases: Biochemical and Structural Analyses.
Antimicrob.Agents Chemother., 67, 2023
5JGU
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BU of 5jgu by Molmil
Spin-Labeled T4 Lysozyme Construct R119V1
分子名称: CHLORIDE ION, Endolysin, PHOSPHATE ION, ...
著者Balo, A.R, Feyrer, H, Ernst, O.P.
登録日2016-04-20
公開日2017-02-15
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.468 Å)
主引用文献Toward Precise Interpretation of DEER-Based Distance Distributions: Insights from Structural Characterization of V1 Spin-Labeled Side Chains.
Biochemistry, 55, 2016
7UJX
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Structure of cAMP-dependent protein kinase using a MD-MX procedure, produced using 2.4 Angstrom data
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ...
著者Wych, D.C, Aoto, P.C, Wall, M.E.
登録日2022-03-31
公開日2022-12-07
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Molecular-dynamics simulation methods for macromolecular crystallography.
Acta Crystallogr D Struct Biol, 79, 2023
6WPN
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Crystal structure of a putative oligosaccharide periplasmic-binding protein from Synechococcus sp. MITs9220
分子名称: 1,2-ETHANEDIOL, GLYCEROL, Substrate-binding protein
著者Ford, B.A, Michie, K.A, Paulsen, I.T, Mabbutt, B.C, Shah, B.S.
登録日2020-04-27
公開日2021-05-12
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Novel functional insights into a modified sugar-binding protein from Synechococcus MITS9220.
Sci Rep, 12, 2022
5JHA
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Structure of Phosphoinositide 3-kinase gamma (PI3K) bound to the potent inhibitor PIKin2
分子名称: Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform, SULFATE ION, [1-{4-[6-amino-4-(trifluoromethyl)pyridin-3-yl]-6-(morpholin-4-yl)pyrimidin-2-yl}-3-(chloromethyl)azetidin-3-yl]methanol
著者Burke, J.E, Inglis, A.J, Williams, R.L.
登録日2016-04-20
公開日2017-03-15
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Deconvolution of Buparlisib's mechanism of action defines specific PI3K and tubulin inhibitors for therapeutic intervention.
Nat Commun, 8, 2017
6O9E
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Structure of HIV-1 Reverse Transcriptase in complex with DNA and INDOPY-1
分子名称: 5-methyl-1-(4-nitrophenyl)-2-oxo-2,5-dihydro-1H-pyrido[3,2-b]indole-3-carbonitrile, AMMONIUM ION, DI(HYDROXYETHYL)ETHER, ...
著者Ruiz, F.X, Hoang, A, Das, K, Arnold, E.
登録日2019-03-13
公開日2019-10-23
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural Basis of HIV-1 Inhibition by Nucleotide-Competing Reverse Transcriptase Inhibitor INDOPY-1.
J.Med.Chem., 62, 2019
6O9O
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Crystal Structure of SMYD3 with Potent and Selective Isoxazole Amide Inhibitor 1
分子名称: 5-cyclopropyl-N-{1-[({trans-4-[(4,4,4-trifluorobutyl)amino]cyclohexyl}methyl)sulfonyl]piperidin-4-yl}-1,2-oxazole-3-carboxamide, GLYCEROL, Histone-lysine N-methyltransferase SMYD3, ...
著者Elkins, P.A, Wang, L.
登録日2019-03-14
公開日2020-03-18
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.586 Å)
主引用文献Discovery of Isoxazole Amides as Potent and Selective SMYD3 Inhibitors
To be published
5JHW
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Crystal Structure of the GDF11:Follistatin 288 complex
分子名称: CITRATE ANION, Follistatin, Growth/differentiation factor 11, ...
著者Walker, R.G, Thompson, T.B.
登録日2016-04-21
公開日2017-03-22
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structural basis for potency differences between GDF8 and GDF11.
BMC Biol., 15, 2017
6WKO
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BU of 6wko by Molmil
Structure of an influenza C virus hemagglutinin-esterase-fusion (HEF2) intermediate
分子名称: CHLORIDE ION, Hemagglutinin-esterase-fusion glycoprotein
著者Serrao, V.H.B, Lee, J.E.
登録日2020-04-16
公開日2021-05-19
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.401 Å)
主引用文献Snapshot of an influenza virus glycoprotein fusion intermediate.
Cell Rep, 35, 2021
8JKS
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BU of 8jks by Molmil
T95R mutant IRF4 DNA-binding domain bound to an DNA containing GAGA motif
分子名称: GAGA-Forward, GAGA-Reverse, Interferon regulatory factor 4
著者Wang, G, Feng, X, Ding, J.
登録日2023-06-01
公開日2023-09-20
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Molecular basis for the functional roles of the multimorphic T95R mutation of IRF4 causing human autosomal dominant combined immunodeficiency.
Structure, 31, 2023
6WXN
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BU of 6wxn by Molmil
EGFR(T790M/V948R) in complex with LN3844
分子名称: CHLORIDE ION, Epidermal growth factor receptor, MAGNESIUM ION, ...
著者Heppner, D.E, Eck, M.J.
登録日2020-05-11
公開日2021-05-19
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Design of a "Two-in-One" Mutant-Selective Epidermal Growth Factor Receptor Inhibitor That Spans the Orthosteric and Allosteric Sites.
J.Med.Chem., 65, 2022
7V0G
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BU of 7v0g by Molmil
Structure of cAMP-dependent protein kinase using a MD-MX procedure, produced using 1.63 Angstrom data
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ...
著者Wych, D.C, Aoto, P.C, Wall, M.E.
登録日2022-05-10
公開日2022-12-07
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Molecular-dynamics simulation methods for macromolecular crystallography.
Acta Crystallogr D Struct Biol, 79, 2023
8J7E
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BU of 8j7e by Molmil
Crystal structure of BRIL in complex with 1b3 Fab
分子名称: Antibody 1b3 Fab Heavy chain, Antibody 1b3 Fab Light chain, Soluble cytochrome b562
著者Zhong, Y.X, Guo, Q, Tao, Y.Y.
登録日2023-04-27
公開日2023-09-06
最終更新日2024-01-03
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献A method for structure determination of GPCRs in various states.
Nat.Chem.Biol., 20, 2024
8J3P
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Formate dehydrogenase mutant from from Candida dubliniensis M4 complexed with NADP+
分子名称: Formate dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Ma, W, Zheng, Y.C, Geng, Q, Chen, C, Xu, J.H.
登録日2023-04-17
公開日2023-09-20
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Engineering a Formate Dehydrogenase for NADPH Regeneration.
Chembiochem, 24, 2023
7UYG
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Structure of the first OTU domain from Legionella pneumophila effector protein LotA
分子名称: GLYCEROL, IODIDE ION, LotA
著者Pruneda, J.N.
登録日2022-05-06
公開日2022-12-21
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Mechanism of Lys6 poly-ubiquitin specificity by the L. pneumophila deubiquitinase LotA.
Mol.Cell, 83, 2023
5JJG
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Structure of magnesium-loaded ALG-2
分子名称: ISOPROPYL ALCOHOL, MAGNESIUM ION, Pcalcium-binding protein ALG-2, ...
著者Tanner, J.J.
登録日2016-04-23
公開日2016-09-07
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献EF5 Is the High-Affinity Mg(2+) Site in ALG-2.
Biochemistry, 55, 2016
6OAK
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Structure of human PARG complexed with JA2131
分子名称: (8S)-1,3-dimethyl-8-{[2-(morpholin-4-yl)ethyl]sulfanyl}-6-sulfanylidene-1,3,6,7,8,9-hexahydro-2H-purin-2-one, Poly(ADP-ribose) glycohydrolase
著者Brosey, C.A, Ahmed, Z, Warden, S, Tainer, J.A.
登録日2019-03-16
公開日2020-03-18
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Selective small molecule PARG inhibitor causes replication fork stalling and cancer cell death.
Nat Commun, 10, 2019
8J69
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Crystal structure of HORMA domain-containing protein 1 (HORMAD1) from Homo sapiens
分子名称: HORMA domain-containing protein 1
著者Yang, X.Y, Liu, X.H.
登録日2023-04-25
公開日2023-09-20
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.67 Å)
主引用文献Structural and biochemical insights into the interaction mechanism underlying HORMAD1 and its partner proteins.
Structure, 31, 2023
6WZP
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BU of 6wzp by Molmil
The crystal structure of 4-vinylbenzoate-bound T252A mutant CYP199A4
分子名称: 4-ethenylbenzoic acid, CHLORIDE ION, Cytochrome P450, ...
著者Coleman, T, Bruning, J.B, Bell, S.G.
登録日2020-05-14
公開日2021-05-19
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Understanding the Mechanistic Requirements for Efficient and Stereoselective Alkene Epoxidation by a Cytochrome P450 Enzyme
Acs Catalysis, 11, 2021
8J1X
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A near-infrared fluorescent protein of de novo backbone design
分子名称: near-infrared fluorescent protein
著者Hu, X, Xu, Y.
登録日2023-04-13
公開日2023-10-04
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Using Protein Design and Directed Evolution to Monomerize a Bright Near-Infrared Fluorescent Protein.
Acs Synth Biol, 13, 2024
7UXO
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BU of 7uxo by Molmil
Structure of PDL1 in complex with FP30790, a Helicon Polypeptide
分子名称: AMINO GROUP, FP30790, N,N'-(1,4-phenylene)diacetamide, ...
著者Li, K, Agarwal, S, Tokareva, O, Thomson, T, Travaline, T, Tattersfield, H, Wahl, S, Verdine, G, McGee, J.
登録日2022-05-05
公開日2022-12-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献De novo mapping of alpha-helix recognition sites on protein surfaces using unbiased libraries.
Proc.Natl.Acad.Sci.USA, 119, 2022
7UQ3
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JmjC domain-containing protein 5 (JMJD5) in complex with Mn and (S)-2-(1-hydroxy-2,5-dioxopyrrolidin-3-yl)acetic acid
分子名称: Bifunctional peptidase and arginyl-hydroxylase JMJD5, GLYCEROL, MANGANESE (II) ION, ...
著者Chowdhury, R, Islam, M.S, Schofield, C.J.
登録日2022-04-19
公開日2022-12-21
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Structural analysis of the 2-oxoglutarate binding site of the circadian rhythm linked oxygenase JMJD5.
Sci Rep, 12, 2022
8J1W
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A near-infrared fluorescent protein of de novo backbone design
分子名称: near-infrared fluorescent protein
著者Hu, X, Xu, Y.
登録日2023-04-13
公開日2023-10-04
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Using Protein Design and Directed Evolution to Monomerize a Bright Near-Infrared Fluorescent Protein.
Acs Synth Biol, 13, 2024
6X58
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MPER-Fluc-Ec2 bound to 10E8v4 antibody
分子名称: 10E8v4 Fab Heavy Chain, 10E8v4 Fab Light Chain, gp41 MPER peptide,Putative fluoride ion transporter CrcB
著者McIlwain, B.C, Stockbridge, R.B.
登録日2020-05-25
公開日2021-05-19
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.26 Å)
主引用文献N-terminal Transmembrane-Helix Epitope Tag for X-ray Crystallography and Electron Microscopy of Small Membrane Proteins.
J.Mol.Biol., 433, 2021

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件を2024-08-28に公開中

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