Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7AHS
DownloadVisualize
BU of 7ahs by Molmil
titin-N2A Ig81-Ig83
分子名称: 1,2-ETHANEDIOL, GLYCEROL, Isoform 5 of Titin, ...
著者Fleming, J.R, Mayans, O.
登録日2020-09-25
公開日2021-03-24
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献The N2A region of titin has a unique structural configuration.
J.Gen.Physiol., 153, 2021
7AY0
DownloadVisualize
BU of 7ay0 by Molmil
Crystal structure of truncated USP1-UAF1
分子名称: Ubiquitin carboxyl-terminal hydrolase 1, WD repeat-containing protein 48, ZINC ION
著者Arkinson, C, Rennie, M.L, Walden, H.
登録日2020-11-10
公開日2021-03-24
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Structural basis of FANCD2 deubiquitination by USP1-UAF1.
Nat.Struct.Mol.Biol., 28, 2021
2SEB
DownloadVisualize
BU of 2seb by Molmil
X-RAY CRYSTAL STRUCTURE OF HLA-DR4 COMPLEXED WITH A PEPTIDE FROM HUMAN COLLAGEN II
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ENTEROTOXIN TYPE B, HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, ...
著者Dessen, A, Lawrence, C.M, Cupo, S, Zaller, D.M, Wiley, D.C.
登録日1997-10-16
公開日1998-01-28
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献X-ray crystal structure of HLA-DR4 (DRA*0101, DRB1*0401) complexed with a peptide from human collagen II.
Immunity, 7, 1997
6JJN
DownloadVisualize
BU of 6jjn by Molmil
Crystal structure of Mumps virus hemagglutinin-neuraminidase bound to sialyl lewisX
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, HN protein, ...
著者Kubota, M, Matsuoka, R, Suzuki, T, Yonekura, K, Yanagi, Y, Hashiguchi, T.
登録日2019-02-26
公開日2019-05-22
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Molecular Mechanism of the Flexible Glycan Receptor Recognition by Mumps Virus.
J.Virol., 93, 2019
4KCJ
DownloadVisualize
BU of 4kcj by Molmil
Structure of neuronal nitric oxide synthase heme domain in complex with N,N'-((ethane-1,2-diylbis(oxy))bis(3,1-phenylene))bis(thiophene-2-carboximidamide)
分子名称: 5,6,7,8-TETRAHYDROBIOPTERIN, ACETATE ION, N,N'-[ethane-1,2-diylbis(oxybenzene-3,1-diyl)]dithiophene-2-carboximidamide, ...
著者Li, H, Poulos, T.L.
登録日2013-04-24
公開日2014-02-12
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Potent and Selective Double-Headed Thiophene-2-carboximidamide Inhibitors of Neuronal Nitric Oxide Synthase for the Treatment of Melanoma.
J.Med.Chem., 57, 2014
1EG7
DownloadVisualize
BU of 1eg7 by Molmil
THE CRYSTAL STRUCTURE OF FORMYLTETRAHYDROFOLATE SYNTHETASE FROM MOORELLA THERMOACETICA
分子名称: FORMYLTETRAHYDROFOLATE SYNTHETASE, SULFATE ION
著者Radfar, R, Shin, R, Sheldrick, G.M, Minor, W, Lovell, C.R, Odom, J.D, Dunlap, R.B, Lebioda, L.
登録日2000-02-14
公開日2001-02-14
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The crystal structure of N(10)-formyltetrahydrofolate synthetase from Moorella thermoacetica.
Biochemistry, 39, 2000
2RDJ
DownloadVisualize
BU of 2rdj by Molmil
Snapshots of a Y-family DNA polymerase in replication: Dpo4 in apo and binary/ternary complex forms
分子名称: CALCIUM ION, DNA (5'-D(*DGP*DGP*DGP*DAP*DCP*DCP*DCP*DTP*DTP*DCP*DGP*DAP*DAP*DT)-3'), DNA (5'-D(P*DTP*DAP*DTP*DTP*DCP*DGP*DAP*DAP*DGP*DGP*DGP*DTP*DCP*DCP*DC)-3'), ...
著者Wong, J.H.Y, Ling, H.
登録日2007-09-24
公開日2008-06-24
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Snapshots of a Y-family DNA polymerase in replication: substrate-induced conformational transitions and implications for fidelity of Dpo4.
J.Mol.Biol., 379, 2008
4V7C
DownloadVisualize
BU of 4v7c by Molmil
Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA structure)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Brilot, A.F, Korostelev, A.A, Ermolenko, D.N, Grigorieff, N.
登録日2013-11-20
公開日2014-07-09
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (7.6 Å)
主引用文献Structure of the ribosome with elongation factor G trapped in the pretranslocation state.
Proc.Natl.Acad.Sci.USA, 110, 2013
6JKG
DownloadVisualize
BU of 6jkg by Molmil
The NAD+-free form of human NSDHL
分子名称: Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating
著者Kim, D, Lee, S.J, Lee, B.
登録日2019-02-28
公開日2020-03-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal structures of human NSDHL and development of its novel inhibitor with the potential to suppress EGFR activity.
Cell.Mol.Life Sci., 78, 2021
7AY2
DownloadVisualize
BU of 7ay2 by Molmil
Crystal structure of truncated USP1-UAF1 reacted with ubiquitin-prg
分子名称: Polyubiquitin-B, Ubiquitin carboxyl-terminal hydrolase 1, WD repeat-containing protein 48, ...
著者Arkinson, C, Rennie, M.L, Walden, H.
登録日2020-11-10
公開日2021-03-24
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural basis of FANCD2 deubiquitination by USP1-UAF1.
Nat.Struct.Mol.Biol., 28, 2021
7AY1
DownloadVisualize
BU of 7ay1 by Molmil
Cryo-EM structure of USP1-UAF1 bound to mono-ubiquitinated FANCD2, and FANCI
分子名称: DNA (61-MER), Fanconi anemia group D2 protein, Fanconi anemia group I protein, ...
著者Rennie, M.L, Arkinson, C, Walden, H.
登録日2020-11-10
公開日2021-03-24
最終更新日2022-07-27
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structural basis of FANCD2 deubiquitination by USP1-UAF1.
Nat.Struct.Mol.Biol., 28, 2021
4V8Q
DownloadVisualize
BU of 4v8q by Molmil
Complex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosome
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S RIBOSOMAL PROTEIN S10, ...
著者Neubauer, C, Gillet, R, Kelley, A.C, Ramakrishnan, V.
登録日2011-12-10
公開日2014-07-09
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Decoding in the absence of a codon by tmRNA and SmpB in the ribosome.
Science, 335, 2012
2RES
DownloadVisualize
BU of 2res by Molmil
Tetracenomycin ARO/CYC mutant R69A
分子名称: Multifunctional cyclase-dehydratase-3-O-methyl transferase tcmN
著者Ames, B.D, Tsai, S.C.
登録日2007-09-26
公開日2008-04-22
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure and functional analysis of tetracenomycin ARO/CYC: implications for cyclization specificity of aromatic polyketides.
Proc.Natl.Acad.Sci.Usa, 105, 2008
7AL2
DownloadVisualize
BU of 7al2 by Molmil
Cell division protein SepF from Methanobrevibacter smithii in complex with FtsZ-CTD
分子名称: Cell division protein FtsZ, Cell division protein SepF
著者Sogues, A, Wehenkel, A.M, Alzari, P.M.
登録日2020-10-04
公開日2021-03-31
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.701 Å)
主引用文献SepF is the FtsZ anchor in archaea, with features of an ancestral cell division system.
Nat Commun, 12, 2021
4W2G
DownloadVisualize
BU of 4w2g by Molmil
Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites
分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S Ribosomal Protein S10, ...
著者Polikanov, Y.S, Osterman, I.A, Szal, T, Tashlitsky, V.N, Serebryakova, M.V, Kusochek, P, Bulkley, D, Malanicheva, I.A, Efimenko, T.A, Efremenkova, O.V, Konevega, A.L, Shaw, K.J, Bogdanov, A.A, Rodnina, M.V, Dontsova, O.A, Mankin, A.S, Steitz, T.A, Sergiev, P.V.
登録日2014-09-12
公開日2014-10-15
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Amicoumacin a inhibits translation by stabilizing mRNA interaction with the ribosome.
Mol.Cell, 56, 2014
4KH3
DownloadVisualize
BU of 4kh3 by Molmil
Structure of a bacterial self-associating protein
分子名称: Antigen 43, MALONATE ION
著者Heras, B, Gee, C.L, Schembri, M.A, Totsika, M.
登録日2013-04-30
公開日2014-01-15
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The antigen 43 structure reveals a molecular Velcro-like mechanism of autotransporter-mediated bacterial clumping.
Proc.Natl.Acad.Sci.USA, 111, 2014
2RSY
DownloadVisualize
BU of 2rsy by Molmil
Solution structure of the SH2 domain of Csk in complex with a phosphopeptide from Cbp
分子名称: Phosphoprotein associated with glycosphingolipid-enriched microdomains 1, Tyrosine-protein kinase CSK
著者Tanaka, H, Akagi, K, Oneyama, C, Tanaka, M, Sasaki, Y, Kanou, T, Lee, Y, Yokogawa, D, Debenecker, M, Nakagawa, A, Okada, M, Ikegami, T.
登録日2012-09-10
公開日2013-04-10
最終更新日2024-10-16
実験手法SOLUTION NMR
主引用文献Identification of a new interaction mode between the Src homology 2 domain of C-terminal Src kinase (Csk) and Csk-binding protein/phosphoprotein associated with glycosphingolipid microdomains.
J.Biol.Chem., 288, 2013
7AMN
DownloadVisualize
BU of 7amn by Molmil
Structure of LuxR with DNA (repression)
分子名称: DNA (5'-D(P*TP*AP*TP*TP*GP*AP*TP*AP*AP*AP*AP*TP*TP*AP*TP*CP*AP*AP*TP*AP*A)-3'), DNA (5'-D(P*TP*TP*AP*TP*TP*GP*AP*TP*AP*AP*TP*TP*TP*TP*AP*TP*CP*AP*AP*TP*A)-3'), HTH-type transcriptional regulator LuxR
著者Liu, B, Reverter, D.
登録日2020-10-09
公開日2021-03-31
最終更新日2021-04-14
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Binding site profiles and N-terminal minor groove interactions of the master quorum-sensing regulator LuxR enable flexible control of gene activation and repression.
Nucleic Acids Res., 49, 2021
2RUX
DownloadVisualize
BU of 2rux by Molmil
Solution structures of the DNA-binding domain (ZF6) of immune-related zinc-finger protein ZFAT
分子名称: ZINC ION, Zinc finger protein ZFAT
著者Tochio, N, Umehara, T, Kigawa, T, Yokoyama, S.
登録日2015-01-26
公開日2015-04-08
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution structures of the DNA-binding domains of immune-related zinc-finger protein ZFAT
J.Struct.Funct.Genom., 16, 2015
2RV4
DownloadVisualize
BU of 2rv4 by Molmil
Solution structures of the DNA-binding domain (ZF5) of mouse immune-related zinc-finger protein ZFAT
分子名称: ZINC ION, Zinc finger protein ZFAT
著者Tochio, N, Umehara, T, Kigawa, T, Yokoyama, S.
登録日2015-01-26
公開日2015-04-08
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution structures of the DNA-binding domains of immune-related zinc-finger protein ZFAT
J.Struct.Funct.Genom., 16, 2015
4WAC
DownloadVisualize
BU of 4wac by Molmil
Crystal Structure of TarM
分子名称: 1,2-ETHANEDIOL, ACETATE ION, DI(HYDROXYETHYL)ETHER, ...
著者Koc, C, Stehle, T, Xia, G, Peschel, A.
登録日2014-08-29
公開日2015-02-25
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural and Enzymatic Analysis of TarM Glycosyltransferase from Staphylococcus aureus Reveals an Oligomeric Protein Specific for the Glycosylation of Wall Teichoic Acid.
J.Biol.Chem., 290, 2015
6JHK
DownloadVisualize
BU of 6jhk by Molmil
Crystal Structure of Bacillus subtilis RsbS
分子名称: RsbS negative regulator of sigma-B
著者Kwon, E, Pathak, D, Dahal, P, Kim, D.Y.
登録日2019-02-18
公開日2019-09-11
最終更新日2019-11-20
実験手法X-RAY DIFFRACTION (3.101 Å)
主引用文献Structural insights into stressosome assembly.
Iucrj, 6, 2019
4K3K
DownloadVisualize
BU of 4k3k by Molmil
E. Coli sliding clamp in complex with (S)-2-(4-methylpentanamido)-3-phenylpropanoic acid
分子名称: CALCIUM ION, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Yin, Z, Oakley, A.J.
登録日2013-04-10
公開日2013-05-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural and Thermodynamic Dissection of Linear Motif Recognition by the E. coli Sliding Clamp
J.Med.Chem., 56, 2013
4V8J
DownloadVisualize
BU of 4v8j by Molmil
Crystal structure of the bacterial ribosome ram mutation G347U.
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Fagan, C.E, Dunkle, J.A, Maehigashi, T, Dunham, C.M.
登録日2011-12-20
公開日2014-07-09
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (3.9 Å)
主引用文献Reorganization of an intersubunit bridge induced by disparate 16S ribosomal ambiguity mutations mimics an EF-Tu-bound state.
Proc.Natl.Acad.Sci.USA, 110, 2013
7AL1
DownloadVisualize
BU of 7al1 by Molmil
Cell division protein SepF from Methanobrevibacter smithii
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Cell division protein SepF
著者Sogues, A, wehenkel, A.M, Alzari, P.M.
登録日2020-10-04
公開日2021-03-31
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献SepF is the FtsZ anchor in archaea, with features of an ancestral cell division system.
Nat Commun, 12, 2021

226262

件を2024-10-16に公開中

PDB statisticsPDBj update infoContact PDBjnumon