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PDB: 116 results

1R5A
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BU of 1r5a by Molmil
Glutathione S-transferase
Descriptor: COPPER (II) ION, GLUTATHIONE SULFONIC ACID, glutathione transferase
Authors:Oakley, A.J.
Deposit date:2003-10-09
Release date:2003-10-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Identification, characterization and structure of a new Delta class glutathione transferase isoenzyme.
Biochem.J., 388, 2005
4U6N
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BU of 4u6n by Molmil
Crystal structure of Escherichia coli DiaA
Descriptor: CHLORIDE ION, DnaA initiator-associating protein DiaA
Authors:Oakley, A.J, Lo, T.
Deposit date:2014-07-29
Release date:2014-08-06
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Crystal structure of Escherichia coli DiaA
To Be Published
22GS
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BU of 22gs by Molmil
HUMAN GLUTATHIONE S-TRANSFERASE P1-1 Y49F MUTANT
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLUTATHIONE S-TRANSFERASE P1-1
Authors:Oakley, A.J.
Deposit date:1998-03-10
Release date:1999-03-23
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Thermodynamic description of the effect of the mutation Y49F on human glutathione transferase P1-1 in binding with glutathione and the inhibitor S-hexylglutathione.
J.Biol.Chem., 278, 2003
20GS
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BU of 20gs by Molmil
GLUTATHIONE S-TRANSFERASE P1-1 COMPLEXED WITH CIBACRON BLUE
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CIBACRON BLUE, GLUTATHIONE S-TRANSFERASE
Authors:Oakley, A.J, Lo Bello, M, Nuccetelli, M, Mazzetti, A.P, Parker, M.W.
Deposit date:1997-12-16
Release date:1998-12-30
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:The ligandin (non-substrate) binding site of human Pi class glutathione transferase is located in the electrophile binding site (H-site).
J.Mol.Biol., 291, 1999
19GS
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BU of 19gs by Molmil
Glutathione s-transferase p1-1
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 3,3'-(4,5,6,7-TETRABROMO-3-OXO-1(3H)-ISOBENZOFURANYLIDENE)BIS [6-HYDROXYBENZENESULFONIC ACID]ANION, GLUTATHIONE, ...
Authors:Oakley, A.J, Lo Bello, M, Parker, M.W.
Deposit date:1997-12-14
Release date:1998-12-30
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The ligandin (non-substrate) binding site of human Pi class glutathione transferase is located in the electrophile binding site (H-site).
J.Mol.Biol., 291, 1999
1T3W
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BU of 1t3w by Molmil
Crystal Structure of the E.coli DnaG C-terminal domain (residues 434 to 581)
Descriptor: ACETIC ACID, DNA primase
Authors:Oakley, A.J, Loscha, K.V, Schaeffer, P.M, Liepinsh, E, Wilce, M.C.J, Otting, G, Dixon, N.E.
Deposit date:2004-04-28
Release date:2004-11-02
Last modified:2016-09-28
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal and solution structures of the helicase-binding domain of Escherichia coli primase
J.Biol.Chem., 280, 2005
1V2A
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Glutathione S-transferase 1-6 from Anopheles dirus species B
Descriptor: GLUTATHIONE SULFONIC ACID, glutathione transferase gst1-6
Authors:Oakley, A.J.
Deposit date:2003-10-10
Release date:2003-10-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Identification, characterization and structure of a new Delta class glutathione transferase isoenzyme.
Biochem.J., 388, 2005
12GS
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BU of 12gs by Molmil
GLUTATHIONE S-TRANSFERASE COMPLEXED WITH S-NONYL-GLUTATHIONE
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLUTATHIONE S-TRANSFERASE, L-gamma-glutamyl-S-nonyl-L-cysteinylglycine
Authors:Oakley, A.J, Lo Bello, M, Parker, M.W.
Deposit date:1997-11-19
Release date:1999-01-13
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The Ligandin (Non-Substrate) Binding Site of Human Pi Class Glutathione Transferase is Located in the Electrophile Binding Site (H-Site).
J.Mol.Biol., 291, 1999
13GS
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BU of 13gs by Molmil
GLUTATHIONE S-TRANSFERASE COMPLEXED WITH SULFASALAZINE
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-HYDROXY-(5-([4-(2-PYRIDINYLAMINO)SULFONYL]PHENYL)AZO)BENZOIC ACID, GLUTATHIONE, ...
Authors:Oakley, A.J, Lo Bello, M, Parker, M.W.
Deposit date:1997-11-20
Release date:1999-01-13
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Ligandin (Non-Substrate) Binding Site of Human Pi Class Glutathione Transferase is Located in the Electrophile Binding Site (H-Site).
J.Mol.Biol., 291, 1999
7SSG
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BU of 7ssg by Molmil
Mfd DNA complex
Descriptor: DNA (5'-D(P*TP*GP*GP*CP*GP*GP*CP*GP*AP*GP*GP*C)-3'), DNA (5'-D(P*TP*TP*GP*CP*CP*TP*CP*GP*CP*TP*GP*CP*CP*A)-3'), Transcription-repair-coupling factor
Authors:Oakley, A.J, Xu, Z.-Q.
Deposit date:2021-11-11
Release date:2022-05-25
Last modified:2022-07-06
Method:ELECTRON MICROSCOPY (5.2 Å)
Cite:Mechanism of transcription modulation by the transcription-repair coupling factor.
Nucleic Acids Res., 50, 2022
5V3Q
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BU of 5v3q by Molmil
Human GSTO1-1 complexed with ML175
Descriptor: Glutathione S-transferase omega-1, N-{3-[(2-chloro-acetyl)-(4-nitro-phenyl)-amino]-propyl}-2,2,2-trifluoro-acetamide, SULFATE ION
Authors:Oakley, A.J.
Deposit date:2017-03-07
Release date:2017-12-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:GSTO1-1 plays a pro-inflammatory role in models of inflammation, colitis and obesity.
Sci Rep, 7, 2017
2I06
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BU of 2i06 by Molmil
Escherichia Coli Replication Terminator Protein (Tus) Complexed With DNA- Locked form
Descriptor: 5'-D(*T*TP*AP*GP*TP*TP*AP*CP*AP*AP*CP*AP*TP*AP*CP*T)-3', 5'-D(*TP*G*AP*TP*AP*TP*GP*TP*TP*GP*TP*AP*AP*CP*TP*A)-3', DNA replication terminus site-binding protein, ...
Authors:Oakley, A.J, Mulcair, M.D, Schaeffer, P.M, Dixon, N.E.
Deposit date:2006-08-10
Release date:2007-08-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Polarity of Termination of DNA Replication in E. coli.
To be Published
2I05
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BU of 2i05 by Molmil
Escherichia Coli Replication Terminator Protein (Tus) Complexed With TerA DNA
Descriptor: 5'-D(*T*TP*AP*GP*TP*TP*AP*CP*AP*AP*CP*AP*TP*AP*CP*T)-3', 5'-D(*TP*AP*GP*TP*AP*TP*GP*TP*TP*GP*TP*AP*AP*CP*TP*A)-3', DNA replication terminus site-binding protein, ...
Authors:Oakley, A.J, Mulcair, M.D, Schaeffer, P.M, Dixon, N.E.
Deposit date:2006-08-10
Release date:2007-08-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Polarity of Termination of DNA Replication in E. coli
To be Published
5WCE
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BU of 5wce by Molmil
Caulobacter crescentus pol III beta
Descriptor: DNA polymerase III subunit beta
Authors:Oakley, A.J.
Deposit date:2017-06-30
Release date:2017-07-26
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of Pol III beta from Caulobacter crescentus
To Be Published
1R7O
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BU of 1r7o by Molmil
Crystal Structure of apo-mannanase 26A from Psudomonas cellulosa
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, SULFATE ION, ZINC ION, ...
Authors:Oakley, A.J, Wilce, M.C.J.
Deposit date:2003-10-22
Release date:2003-11-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural investigation of Mannanase 26A from Pseudomonas cellulosa reveals an induced fit mechanism and a non-substrate ligand binding site
To be published
1RH9
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BU of 1rh9 by Molmil
Family GH5 endo-beta-mannanase from Lycopersicon esculentum (tomato)
Descriptor: endo-beta-mannanase
Authors:Oakley, A.J, Bourgault, R, Bewley, J.D, Wilce, M.C.J.
Deposit date:2003-11-14
Release date:2005-04-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Three-dimensional structure of (1,4)-beta-D-mannan mannanohydrolase from tomato fruit.
Protein Sci., 14, 2005
4XR0
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BU of 4xr0 by Molmil
Escherichia Coli Replication Terminator Protein (Tus) Complexed With DNA- G/T mismatch.
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, DNA (5'-D(*AP*GP*TP*TP*AP*CP*AP*AP*CP*AP*TP*AP*GP*T)-3'), DNA (5'-D(*AP*TP*TP*AP*TP*GP*TP*TP*GP*TP*AP*AP*CP*TP*A)-3'), ...
Authors:Oakley, A.J.
Deposit date:2015-01-20
Release date:2015-08-26
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Replisome speed determines the efficiency of the Tus-Ter replication termination barrier.
Nature, 525, 2015
4XR1
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BU of 4xr1 by Molmil
Escherichia Coli Replication Terminator Protein (Tus) Complexed With DNA- AG/AT mismatch.
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, DNA (5'-D(*GP*TP*AP*AP*TP*GP*TP*TP*GP*TP*AP*AP*CP*TP*A)-3'), DNA (5'-D(*TP*AP*GP*TP*TP*AP*CP*AP*AP*CP*AP*TP*AP*G)-3'), ...
Authors:Oakley, A.J.
Deposit date:2015-01-20
Release date:2015-08-26
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Replisome speed determines the efficiency of the Tus-Ter replication termination barrier.
Nature, 525, 2015
4XR2
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BU of 4xr2 by Molmil
Escherichia Coli Replication Terminator Protein (Tus) H114A mutant Complexed With DNA- TerA lock.
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, DNA (5'-D(*TP*AP*GP*TP*TP*AP*CP*AP*AP*CP*AP*TP*AP*C)-3'), ...
Authors:Oakley, A.J.
Deposit date:2015-01-20
Release date:2015-08-26
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Replisome speed determines the efficiency of the Tus-Ter replication termination barrier.
Nature, 525, 2015
4XR3
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BU of 4xr3 by Molmil
Escherichia Coli Replication Terminator Protein (Tus) Complexed With DNA- GC(6) swapped.
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, DNA (5'-D(*TP*AP*CP*TP*AP*TP*GP*TP*TP*GP*TP*AP*AP*CP*TP*A)-3'), DNA (5'-D(*TP*AP*GP*TP*TP*AP*CP*AP*AP*CP*AP*TP*AP*GP*T)-3'), ...
Authors:Oakley, A.J.
Deposit date:2015-01-20
Release date:2015-08-26
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Replisome speed determines the efficiency of the Tus-Ter replication termination barrier.
Nature, 525, 2015
7T20
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BU of 7t20 by Molmil
E. coli DnaB bound to ssDNA and AMPPNP
Descriptor: DNA (5'-D(*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Oakley, A.J, Xu, Z.Q.
Deposit date:2021-12-02
Release date:2022-12-14
Method:ELECTRON MICROSCOPY (4.7 Å)
Cite:Sequence of conformation changes of DnaB helicase during DNA unwinding and priming in Escherichia coli
To Be Published
7T21
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BU of 7t21 by Molmil
E. coli DnaB bound to ssDNA and ADP-AlF4
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA (5'-D(*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), MAGNESIUM ION, ...
Authors:Oakley, A.J, Xu, Z.Q.
Deposit date:2021-12-02
Release date:2023-01-18
Method:ELECTRON MICROSCOPY (5.4 Å)
Cite:Sequence of conformation changes of DnaB helicase during DNA unwinding and priming in Escherichia coli
To Be Published
7T22
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BU of 7t22 by Molmil
E. coli DnaB bound to three DnaG C-terminal domains, ssDNA, ADP and AlF4
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA (5'-D(*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), DNA primase, ...
Authors:Oakley, A.J, Xu, Z.Q.
Deposit date:2021-12-02
Release date:2023-01-18
Last modified:2023-05-31
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Sequence of conformation changes of DnaB helicase during DNA unwinding and priming in Escherichia coli
To Be Published
7T23
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BU of 7t23 by Molmil
E. coli DnaB bound to two DnaG C-terminal domains, ssDNA, ADP and AlF4
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA (5'-D(*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), DNA primase, ...
Authors:Oakley, A.J, Xu, Z.Q.
Deposit date:2021-12-02
Release date:2023-01-18
Last modified:2023-05-31
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Sequence of conformation changes of DnaB helicase during DNA unwinding and priming in Escherichia coli
To Be Published
14GS
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BU of 14gs by Molmil
GLUTATHIONE S-TRANSFERASE P1-1 APO FORM 1
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLUTATHIONE S-TRANSFERASE
Authors:Oakley, A.J, Lo Bello, M, Ricci, G, Federici, G, Parker, M.W.
Deposit date:1997-11-29
Release date:1999-01-13
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Evidence for an induced-fit mechanism operating in pi class glutathione transferases.
Biochemistry, 37, 1998

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