2RDJ

Snapshots of a Y-family DNA polymerase in replication: Dpo4 in apo and binary/ternary complex forms

Summary for 2RDJ

• Entry DOI: 10.2210/pdb2rdj/pdb
• Descriptor: DNA (5'-D(*DGP*DGP*DGP*DAP*DCP*DCP*DCP*DTP*DTP*DCP*DGP*DAP*DAP*DT)-3'), DNA (5'-D(P*DTP*DTP*DAP*DTP*DTP*DCP*DGP*DAP*DAP*DGP*DGP*DGP*DTP*DCP*DCP*DC)-3'), DNA (5'-D(P*DTP*DAP*DTP*DTP*DCP*DGP*DAP*DAP*DGP*DGP*DGP*DTP*DCP*DCP*DC)-3'), ... (8 entities in total)
• Functional Keywords: dna polymerase, dna-enzyme complex, y-family, dna damage, dna repair, dna replication, dna-binding, dna-directed dna polymerase, magnesium, metal-binding, mutator protein, nucleotidyltransferase, transferase, transferase-dna complex, transferase/dna
• Biological source: Sulfolobus solfataricus
• Cellular location: Cytoplasm : Q97W02
• Total number of polymer chains: 6
• Total formula weight: 99126.12

Authors

Wong, J.H.Y.,Ling, H. (deposition date: 2007-09-24, release date: 2008-06-24, Last modification date: 2023-08-30)

• Primary citation: Wong, J.H.,Fiala, K.A.,Suo, Z.,Ling, H.; Snapshots of a Y-family DNA polymerase in replication: substrate-induced conformational transitions and implications for fidelity of Dpo4.; J.Mol.Biol., 379:317-330, 2008; PubMed: 18448122; DOI: 10.1016/j.jmb.2008.03.038

Experimental method

X-RAY DIFFRACTION (2.2 Å)