2RDJ
Snapshots of a Y-family DNA polymerase in replication: Dpo4 in apo and binary/ternary complex forms
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C (C, E) | DNA (5'-D(*DGP*DGP*DGP*DAP*DCP*DCP*DCP*DTP*DTP*DCP*DGP*DAP*DAP*DT)-3') | polymer | 14 | 4280.8 | 2 | |||
| 2 | B (D) | DNA (5'-D(P*DTP*DTP*DAP*DTP*DTP*DCP*DGP*DAP*DAP*DGP*DGP*DGP*DTP*DCP*DCP*DC)-3') | polymer | 16 | 4889.2 | 1 | |||
| 3 | D (F) | DNA (5'-D(P*DTP*DAP*DTP*DTP*DCP*DGP*DAP*DAP*DGP*DGP*DGP*DTP*DCP*DCP*DC)-3') | polymer | 15 | 4585.0 | 1 | |||
| 4 | E, F (A, B) | DNA polymerase IV | polymer | 352 | 40257.9 | 2 | UniProt (Q97W02) Pfam (PF00817) Pfam (PF11798) Pfam (PF11799) | Sulfolobus solfataricus | Pol IV |
| 5 | G, H, K, L (A, B) | CALCIUM ION | non-polymer | 40.1 | 4 | Chemie (CA) | |||
| 6 | I (A) | THYMIDINE-5'-PHOSPHATE | non-polymer | 322.2 | 1 | Chemie (TMP) | |||
| 7 | J (A) | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) | |||
| 8 | M, N, O, P, Q... (C, D, E, F, A...) | water | water | 18.0 | 305 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 98551.5 | |
| Non-Polymers* | Number of molecules | 6 |
| Total formula weight | 574.6 | |
| All* | Total formula weight | 99126.1 |
