PDB: 37932 件ウェブページステータス検索Chemie searchBIRD

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5NRY	Cys-Gly dipeptidase GliJ in complex with Fe3+ 分子名称: CHLORIDE ION, Dipeptidase gliJ, FE (III) ION 著者 Groll, M, Huber, E.M. 登録日 2017-04-25 公開日 2017-05-31 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Gliotoxin Biosynthesis: Structure, Mechanism, and Metal Promiscuity of Carboxypeptidase GliJ. ACS Chem. Biol., 12, 2017
4XLR	Crystal structure of T.aquaticus transcription initiation complex with CarD containing bubble promoter and RNA 分子名称: CarD-like transcriptional regulator, DNA (48-MER), DNA-directed RNA polymerase subunit alpha, ... 著者 Bae, B, Darst, S.A. 登録日 2015-01-13 公開日 2015-09-23 最終更新日 2017-11-22 実験手法 X-RAY DIFFRACTION (4.3 Å) 主引用文献 CarD uses a minor groove wedge mechanism to stabilize the RNA polymerase open promoter complex. Elife, 4, 2015
8VRD	Rigid body fitted model for free recombinant gamma tubulin ring complex. 分子名称: Actin, cytoplasmic 1, Gamma-tubulin complex component 3, ... 著者 Aher, A, Urnavicius, L, Kapoor, T.M. 登録日 2024-01-21 公開日 2024-03-27 最終更新日 2024-10-09 実験手法 ELECTRON MICROSCOPY (7 Å) 主引用文献 Structure of the gamma-tubulin ring complex-capped microtubule. Nat.Struct.Mol.Biol., 31, 2024
5N7D	MAGI-1 complexed with a RSK1 peptide 分子名称: CALCIUM ION, GLYCEROL, Membrane-associated guanylate kinase, ... 著者 Gogl, G, Nyitray, L. 登録日 2017-02-20 公開日 2017-11-08 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Dynamic control of RSK complexes by phosphoswitch-based regulation. FEBS J., 285, 2018
4XOU	Crystal structure of the SR Ca2+-ATPase in the Ca2-E1-MgAMPPCP form determined by serial femtosecond crystallography using an X-ray free-electron laser. 分子名称: CALCIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, POTASSIUM ION, ... 著者 Bublitz, M, Nass, K, Drachmann, N.D, Markvardsen, A.J, Gutmann, M.J, Barends, T.R.M, Mattle, D, Shoeman, R.L, Doak, R.B, Boutet, S, Messerschmidt, M, Seibert, M.M, Williams, G.J, Foucar, L, Reinhard, L, Sitsel, O, Gregersen, J.L, Clausen, J.D, Boesen, T, Gotfryd, K, Wang, K.-T, Olesen, C, Moller, J.V, Nissen, P, Schlichting, I. 登録日 2015-01-16 公開日 2015-06-10 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structural studies of P-type ATPase-ligand complexes using an X-ray free-electron laser. Iucrj, 2, 2015
8VRJ	Rigid body fitted model for gamma tubulin ring complex capped microtubule 分子名称: Actin, cytoplasmic 1, Gamma-tubulin complex component 3, ... 著者 Aher, A, Urnavicius, L, Kapoor, T.M. 登録日 2024-01-22 公開日 2024-03-27 最終更新日 2024-07-31 実験手法 ELECTRON MICROSCOPY (7.7 Å) 主引用文献 Structure of the gamma-tubulin ring complex-capped microtubule. Nat.Struct.Mol.Biol., 31, 2024
8VRK	Rigid body fitted model for refined density map of gamma tubulin ring complex capped microtubule 分子名称: Actin, cytoplasmic 1, Gamma-tubulin complex component 3, ... 著者 Aher, A, Urnavicius, L, Kapoor, T.M. 登録日 2024-01-22 公開日 2024-03-27 最終更新日 2024-07-31 実験手法 ELECTRON MICROSCOPY (8.5 Å) 主引用文献 Structure of the gamma-tubulin ring complex-capped microtubule. Nat.Struct.Mol.Biol., 31, 2024
4DC1	Crystal Structure of Y202F Actinorhodin Polyketide Ketoreductase with NADPH 分子名称: Ketoacyl reductase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE 著者 Javidpour, P, Tsai, S.-C. 登録日 2012-01-16 公開日 2013-01-16 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.82 Å) 主引用文献 The Determinants of Activity and Specificity in Actinorhodin Type II Polyketide Ketoreductase. Chem.Biol., 20, 2013
7DZ8	State transition supercomplex PSI-LHCI-LHCII from the LhcbM1 lacking mutant of Chlamydomonas reinhardtii 分子名称: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ... 著者 Pan, X.W, Li, A.J, Liu, Z.F, Li, M. 登録日 2021-01-23 公開日 2021-06-30 最終更新日 2024-10-09 実験手法 ELECTRON MICROSCOPY (3.16 Å) 主引用文献 Structural basis of LhcbM5-mediated state transitions in green algae. Nat.Plants, 7, 2021
7DZ7	State transition supercomplex PSI-LHCI-LHCII from double phosphatase mutant pph1;pbcp of green alga Chlamydomonas reinhardtii 分子名称: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ... 著者 Pan, X.W, Li, A.J, Liu, Z.F, Li, M. 登録日 2021-01-23 公開日 2021-06-30 最終更新日 2021-09-01 実験手法 ELECTRON MICROSCOPY (2.84 Å) 主引用文献 Structural basis of LhcbM5-mediated state transitions in green algae. Nat.Plants, 7, 2021
2Q8T	Crystal Structure of the CC chemokine CCL14 分子名称: CCL14 著者 Blain, K.Y. 登録日 2007-06-11 公開日 2007-09-11 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.23 Å) 主引用文献 Structural and Functional Characterization of CC Chemokine CCL14 Biochemistry, 46, 2007
2PYE	Crystal Structures of High Affinity Human T-Cell Receptors Bound to pMHC RevealNative Diagonal Binding Geometry TCR Clone C5C1 Complexed with MHC 分子名称: 2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHANOL, Beta-2-microglobulin, Cancer/testis antigen 1B, ... 著者 Sami, M, Rizkallah, P.J, Dunn, S, Li, Y, Moysey, R, Vuidepot, A, Baston, E, Todorov, P, Molloy, P, Gao, F, Boulter, J.M, Jakobsen, B.K. 登録日 2007-05-16 公開日 2007-09-25 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal structures of high affinity human T-cell receptors bound to peptide major histocompatibility complex reveal native diagonal binding geometry Protein Eng.Des.Sel., 20, 2007
4XGS	Crystal structure analysis of novel iron uptake mechanism of Gram-negative bacterial ferritin 分子名称: Ferritin, GLYCEROL, HYDROXY DIIRON-OXO MOIETY, ... 著者 Kim, S. 登録日 2015-01-02 公開日 2016-07-06 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Structural Basis of Novel Iron-Uptake Route and Reaction Intermediates in Ferritins from Gram-Negative Bacteria J. Mol. Biol., 428, 2016
4YX4	Human Carbonic Anhydrase II complexed with an inhibitor with a benzenesulfonamide group (1). 分子名称: Carbonic anhydrase 2, GLYCEROL, MERCURIBENZOIC ACID, ... 著者 Rechlin, C, Heine, A, Klebe, G. 登録日 2015-03-22 公開日 2016-02-03 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.01 Å) 主引用文献 Kinetic and Structural Insights into the Mechanism of Binding of Sulfonamides to Human Carbonic Anhydrase by Computational and Experimental Studies. J.Med.Chem., 59, 2016
4YCN	Crystal structure of the calcium pump with bound marine macrolide BLLB 分子名称: (4S,5E,8S,9E,11S,13E,15E,18R)-4-hydroxy-8-methoxy-9,11-dimethyl-18-[(1Z,4E)-2-methylhexa-1,4-dien-1-yl]oxacyclooctadeca-5,9,13,15-tetraen-2-one, PHOSPHATIDYLETHANOLAMINE, SODIUM ION, ... 著者 Morita, M, Ogawa, H, Ohno, O, Yamori, T, Suenaga, K, Toyoshima, C. 登録日 2015-02-20 公開日 2016-01-13 最終更新日 2020-02-05 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Biselyngbyasides, cytotoxic marine macrolides, are novel and potent inhibitors of the Ca(2+) pumps with a unique mode of binding Febs Lett., 589, 2015
4YGL	NaClO4--Interactions between Hofmeister Anions and the Binding Pocket of a Protein 分子名称: Carbonic anhydrase 2, HYDROXIDE ION, PERCHLORATE ION, ... 著者 Fox, J.M, Kang, K, Sherman, W, Heroux, A, Sastry, G.M, Baghbanzadeh, M, Lockett, M.R, Whitesides, G.M. 登録日 2015-02-26 公開日 2015-03-25 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.51 Å) 主引用文献 Interactions between Hofmeister Anions and the Binding Pocket of a Protein. J.Am.Chem.Soc., 137, 2015
4DX1	Crystal structure of the human TRPV4 ankyrin repeat domain 分子名称: GLYCEROL, PHOSPHATE ION, Transient receptor potential cation channel subfamily V member 4 著者 Inada, H, Gaudet, R. 登録日 2012-02-27 公開日 2012-07-18 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.85 Å) 主引用文献 Structural and biochemical consequences of disease-causing mutations in the ankyrin repeat domain of the human TRPV4 channel. Biochemistry, 51, 2012
4YFX	Escherichia coli RNA polymerase in complex with Myxopyronin B 分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... 著者 Molodtsov, V, Fleming, P.R, Eyermann, C.J, Ferguson, A.D, Foulk, M.A, McKinney, D.C, Masse, C.E, Buurman, E.T, Murakami, K.S. 登録日 2015-02-25 公開日 2015-03-11 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (3.844 Å) 主引用文献 X-ray Crystal Structures of Escherichia coli RNA Polymerase with Switch Region Binding Inhibitors Enable Rational Design of Squaramides with an Improved Fraction Unbound to Human Plasma Protein. J.Med.Chem., 58, 2015
4YMN	Structure of human DNA polymerase beta complexed with N7BG in the template base paired with incoming non-hydrolyzable CTP 分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]cytidine, DNA 10-mer (up-primer), DNA 16-mer (template), ... 著者 Lee, S, Koag, M.-C. 登録日 2015-03-06 公開日 2016-03-09 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.591 Å) 主引用文献 Structural and kinetic studies of the effect of guanine-N7 alkylation and metal cofactors on DNA replication. Biochemistry, 2018
4YNM	ASH1L wild-type SET domain in complex with S-adenosyl methionine (SAM) 分子名称: Histone-lysine N-methyltransferase ASH1L, S-ADENOSYLMETHIONINE, ZINC ION 著者 Rogawski, D.S, Ndoj, J, Cho, H.-J, Maillard, I, Grembecka, J, Cierpicki, T. 登録日 2015-03-10 公開日 2015-09-02 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.19 Å) 主引用文献 Two Loops Undergoing Concerted Dynamics Regulate the Activity of the ASH1L Histone Methyltransferase. Biochemistry, 54, 2015
2Q5H	Crystal structure of apo-wildtype Glycyl-tRNA synthetase 分子名称: Glycyl-tRNA synthetase 著者 Cader, M.Z, Ren, J, James, P.A, Bird, L.E, Talbot, K, Stammers, D.K, Oxford Protein Production Facility (OPPF) 登録日 2007-06-01 公開日 2007-06-19 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Crystal structure of human wildtype and S581L-mutant glycyl-tRNA synthetase, an enzyme underlying distal spinal muscular atrophy. Febs Lett., 581, 2007
4YPC	Trimeric crystal structure of vimentin coil1B fragment 分子名称: Vimentin 著者 Chernyatina, A.A, Strelkov, S.V. 登録日 2015-03-12 公開日 2015-12-02 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.44 Å) 主引用文献 How to Study Intermediate Filaments in Atomic Detail. Meth. Enzymol., 568, 2016
4YPM	Crystal structure of a LonA protease domain in complex with bortezomib 分子名称: CITRIC ACID, DI(HYDROXYETHYL)ETHER, Lon protease, ... 著者 Lin, C.-C, Chang, C.-I. 登録日 2015-03-13 公開日 2016-03-16 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Structural Basis for the Magnesium-Dependent Activation and Hexamerization of the Lon AAA+ Protease Structure, 24, 2016
4YVY	Crystal structure of human carbonic anhydrase II in complex with hydroxylamine-O-sulfonamide, a molecule incorporating two zinc-binding groups. 分子名称: Carbonic anhydrase 2, ZINC ION, amino(aminooxy)sulfane dioxide 著者 Di Fiore, A, De Simone, G. 登録日 2015-03-20 公開日 2016-03-30 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 A VERSATILE ZINC-BINDING GROUP FOR CARBONIC ANHYDRASE INHIBITORS To Be Published
4YUE	Mouse IL-2 Bound to S4B6 Fab Fragment 分子名称: GLYCEROL, Interleukin-2, S4B6 Fab heavy chain, ... 著者 Spangler, J.B, Jude, K.M, Garcia, K.C. 登録日 2015-03-18 公開日 2015-07-01 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.194 Å) 主引用文献 Antibodies to Interleukin-2 Elicit Selective T Cell Subset Potentiation through Distinct Conformational Mechanisms. Immunity, 42, 2015

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