PDB: 226262 件ウェブページステータス検索Chemie searchBIRD

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8H79	The crystal structure of cyanorhodopsin-II (CyR-II) P7104R from Nodosilinea nodulosa PCC 7104 分子名称: CHLORIDE ION, HEXADECANE, HEXANE, ... 著者 Hosaka, T, Kimura-Someya, T, Shirouzu, M. 登録日 2022-10-19 公開日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.07 Å) 主引用文献 Cyanorhodopsin-II: diverse proton-pumping rhodopsins in the cyanobacterial lineage illuminated by large-scale metagenomic To Be Published
4WFZ	Coxsackievirus B3 3Dpol RNA Dependent RNA Polymerase - NaCl Crystal Form 分子名称: RNA-directed RNA polymerase, SODIUM ION 著者 Peersen, O.B, McDonald, S.M. 登録日 2014-09-17 公開日 2014-10-22 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.803 Å) 主引用文献 Structure-Function Relationships Underlying the Replication Fidelity of Viral RNA-Dependent RNA Polymerases. J.Virol., 89, 2015
8H7M	Structure of nanobody 11A in complex with parathion 分子名称: Nanobody 11A, parathion 著者 Wang, H, Li, J.D, Shen, X, Xu, Z.L, Sun, Y.M. 登録日 2022-10-20 公開日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.87 Å) 主引用文献 Structure of nanobody 11A in complex with parathion To Be Published
4WG5	Calcium-Dependent Protein Kinase 1 from Toxoplasma gondii (TgCDPK1) in complex with inhibitor UW1647 分子名称: 5-amino-3-[7-(cyclobutyloxy)quinolin-3-yl]-1-cyclohexyl-1H-pyrazole-4-carboxamide, Calmodulin-domain protein kinase 1 著者 Merritt, E.A. 登録日 2014-09-17 公開日 2014-10-15 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Calcium-Dependent Protein Kinase 1 from Toxoplasma gondii (TgCDPK1) in complex with inhibitor UW1647 to be published
2V06	Crystal structure of the PPM Ser-Thr phosphatase MsPP from Mycobacterium smegmatis at pH 5.5 分子名称: CHLORIDE ION, MAGNESIUM ION, SER-THR PHOSPHATASE MSPP 著者 Wehenkel, A, Bellinzoni, M, Schaeffer, F, Villarino, A, Alzari, P.M. 登録日 2007-05-08 公開日 2007-10-16 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.05 Å) 主引用文献 Structural and Binding Studies of the Three-Metal Center in Two Mycobacterial Ppm Ser/Thr Protein Phosphatases. J.Mol.Biol., 374, 2007
8H7J	The crystal structure of CD163 SRCR5-9 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Scavenger receptor cysteine-rich type 1 protein M130, ... 著者 Luo, Z.P, Li, R, Ma, H.F. 登録日 2022-10-20 公開日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 The crystal structure of CD163 SRCR5-9 To Be Published
4WH9	Structure of the CDC25B Phosphatase Catalytic Domain with Bound Inhibitor 分子名称: 2-[(2-cyano-3-fluoro-5-hydroxyphenyl)sulfanyl]ethanesulfonic acid, GLYCEROL, M-phase inducer phosphatase 2, ... 著者 Lund, G.L, Dudkin, S, Borkin, D, Ni, W, Grembecka, J, Cierpicki, T. 登録日 2014-09-20 公開日 2014-12-10 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Inhibition of CDC25B Phosphatase Through Disruption of Protein-Protein Interaction. Acs Chem.Biol., 10, 2015
2UZG	Zf-UBP domain of VDU1 分子名称: UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 33, ZINC ION 著者 Allen, M.D, Bycroft, M. 登録日 2007-04-27 公開日 2007-05-08 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 The Solution Structure of the Znf Ubp Domain of Usp33/Vdu1. Protein Sci., 16, 2007
7ZWO	Crystal structure of human BCL6 BTB domain in complex with compound 2 分子名称: (5~{S},7~{R})-5-(4-chlorophenyl)-7-(2,3,4-trimethoxyphenyl)-4,5,6,7-tetrahydro-[1,2,4]triazolo[1,5-a]pyrimidine, 1,2-ETHANEDIOL, ALA-TRP-VAL-ILE-PRO-ALA, ... 著者 Collie, G.W, Le Bihan, Y.-V, van Montfort, R.L.M. 登録日 2022-05-19 公開日 2022-11-16 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.39 Å) 主引用文献 Discovering cell-active BCL6 inhibitors: effectively combining biochemical HTS with multiple biophysical techniques, X-ray crystallography and cell-based assays. Sci Rep, 12, 2022
2VCA	Family 89 glycoside hydrolase from Clostridium perfringens in complex with beta-N-acetyl-D-glucosamine 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ALPHA-N-ACETYLGLUCOSAMINIDASE, CALCIUM ION, ... 著者 Ficko-Blean, E, Stubbs, K.A, Berg, O, Vocadlo, D.J, Boraston, A.B. 登録日 2007-09-19 公開日 2008-03-18 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Structural and Mechanistic Insight Into the Basis of Mucopolysaccharidosis Iiib. Proc.Natl.Acad.Sci.USA, 105, 2008
8HQE	Cryo-EM structure of the apo-GPR132-Gi 分子名称: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(i) subunit alpha-1, ... 著者 Wang, J.L, Ding, J.H, Sun, J.P, Yu, X. 登録日 2022-12-13 公開日 2023-10-11 最終更新日 2024-10-16 実験手法 ELECTRON MICROSCOPY (2.97 Å) 主引用文献 Functional screening and rational design of compounds targeting GPR132 to treat diabetes. Nat Metab, 5, 2023
4WHK	A New Class of Peptidomimetics Targeting the Polo-box Domain of Polo-like kinase 1 分子名称: C6H5(CH2)8-DERIVATIZED PEPTIDE INHIBITOR, Serine/threonine-protein kinase PLK1 著者 Bang, J.K, Han, Y.H, Ahn, M.J, Lee, K.S. 登録日 2014-09-23 公開日 2014-12-03 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 A new class of peptidomimetics targeting the polo-box domain of polo-like kinase 1. J.Med.Chem., 58, 2015
7ZWS	Crystal structure of human BCL6 BTB domain in complex with compound 13 分子名称: 1,2-ETHANEDIOL, 2-[3-cyano-6-thiophen-2-yl-4-(trifluoromethyl)pyridin-2-yl]sulfanyl-2-phenyl-ethanoic acid, ALA-TRP-VAL-ILE-PRO-ALA, ... 著者 Collie, G.W, Le Bihan, Y.-V, van Montfort, R.L.M. 登録日 2022-05-19 公開日 2022-11-16 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.53 Å) 主引用文献 Discovering cell-active BCL6 inhibitors: effectively combining biochemical HTS with multiple biophysical techniques, X-ray crystallography and cell-based assays. Sci Rep, 12, 2022
2VDP	Integrin AlphaIIbBeta3 Headpiece Bound to Fibrinogen Gamma chain peptide,LGGAKQAGDV 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, FIBRINOGEN, ... 著者 Springer, T.A, Zhu, J, Xiao, T. 登録日 2007-10-10 公開日 2008-09-02 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structural Basis for Distinctive Recognition of Fibrinogen Gammac Peptide by the Platelet Integrin Alphaiibbeta3. J.Cell Biol., 182, 2008
8H4X	Structure of cleaved Serpin B9 分子名称: 1,2-ETHANEDIOL, Serpin B9, ZINC ION 著者 Zhou, A, Yan, T. 登録日 2022-10-11 公開日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.93 Å) 主引用文献 Expression, purification and crystallization of cleaved Serpin B9 To Be Published
8H5L	Crystal structure of PETase N37D/S121E/R132E/A171C/A180V/P181V/D186H/S193C/A202C/V211C/S214Y/R224E/N233C/S242T/N246D/N275C/S282C/F284C mutant from Ideonella sakaiensis 分子名称: IODIDE ION, POTASSIUM ION, Poly(ethylene terephthalate) hydrolase 著者 Lee, S.H, Seo, H, Kim, K.-J. 登録日 2022-10-13 公開日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 A case of balance engineering exhibits kinetic relationship between mesophilic and thermophilic poly(ethylene terephthalate) depolymerases. To Be Published
2UZ6	AChBP-targeted a-conotoxin correlates distinct binding orientations with nAChR subtype selectivity. 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ALPHA-CONOTOXIN TXIA(A10L), GLYCEROL, ... 著者 Ulens, C, Dutertre, S, Buttner, R, Fish, A, van Elk, R, Kendel, Y, Hopping, G, Alewood, P.F, Schroeder, C, Nicke, A, Smit, A.B, Sixma, T.K, Lewis, R.J. 登録日 2007-04-25 公開日 2007-08-07 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Achbp-Targeted Alpha-Conotoxin Correlates Distinct Binding Orientations with Nachr Subtype Selectivity Embo J., 26, 2007
4WHO	Resting Protocatechuate 3,4-dioxygenase (pseudomonas putida) at pH 8.5 分子名称: BETA-MERCAPTOETHANOL, BICARBONATE ION, FE (III) ION, ... 著者 Knoot, C.J, Lipscomb, J.D. 登録日 2014-09-23 公開日 2014-12-31 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.83 Å) 主引用文献 Crystal structures of alkylperoxo and anhydride intermediates in an intradiol ring-cleaving dioxygenase. Proc.Natl.Acad.Sci.USA, 112, 2015
4WHY	Structure of the Hepatitis C virus envelope glycoprotein E2 antigenic region 412-423 bound to the broadly neutralizing antibody 3/11, P21 crystal form 分子名称: Heavy chain of Fab fragment derived from neutralizing antibody 3/11, Light chain of Fab fragment derived from neutralizing antibody 3/11, epitope peptide 著者 Krey, T, Rey, F.A. 登録日 2014-09-24 公開日 2014-12-17 最終更新日 2015-02-04 実験手法 X-RAY DIFFRACTION (2.62 Å) 主引用文献 Structural flexibility of a conserved antigenic region in hepatitis C virus glycoprotein e2 recognized by broadly neutralizing antibodies. J.Virol., 89, 2015
2UZI	Crystal structure of HRAS(G12V) - anti-RAS Fv complex 分子名称: ANTI-RAS FV HEAVY CHAIN, ANTI-RAS FV LIGHT CHAIN, GTPASE HRAS, ... 著者 Tanaka, T, williams, R.L, Rabbitts, T.H. 登録日 2007-04-27 公開日 2007-06-26 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Tumour Prevention by a Single Antibody Domain Targeting the Interaction of Signal Transduction Proteins with Ras. Embo J., 26, 2007
8H6H	cryo-EM structure of cellodextrin phosphorylase from Clostridium thermocellum 分子名称: CHLORIDE ION, Cellodextrin phosphorylase 著者 Kuga, T, Sunagawa, N, Igarashi, K. 登録日 2022-10-17 公開日 2023-10-25 実験手法 ELECTRON MICROSCOPY (2.3 Å) 主引用文献 structure and dynamics of cellodextrin phosphorylase from Clostridium thermocellum determine chain length and crystalline packing of highly ordered cellulose II synthesized in vitro To Be Published
2VEA	The complete sensory module of the cyanobacterial phytochrome Cph1 in the Pr-state. 分子名称: PHYCOCYANOBILIN, PHYTOCHROME-LIKE PROTEIN CPH1 著者 Essen, L.-O, Mailliet, J, Hughes, J. 登録日 2007-10-18 公開日 2008-09-30 最終更新日 2014-02-26 実験手法 X-RAY DIFFRACTION (2.21 Å) 主引用文献 The Structure of a Complete Phytochrome Sensory Module in the Pr Ground State. Proc.Natl.Acad.Sci.USA, 105, 2008
4WHG	Crystal Structure of TR3 LBD in complex with Molecule 3 分子名称: 1-(3,4,5-trihydroxyphenyl)octan-1-one, GLYCEROL, Nuclear receptor subfamily 4 group A member 1 著者 Li, F.W, Cai, Q.X, Li, A.Z, Tian, X.Y, Wang, W.J, Wang, Y, Hou, P.P, Wu, Q, Lin, T.W. 登録日 2014-09-22 公開日 2015-09-09 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.18 Å) 主引用文献 Induction of Autophagic Death in Cancer Cells by Agonizing TR3 and Attenuating Akt2 Activity Chem.Biol., 22, 2015
8H2W	Cellodextrin phosphorylase from Clostridium thermocellum mutant - all cysteine residues were substituted with serines 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, CHLORIDE ION, ... 著者 Kuga, T, Sunagawa, N, Igarashi, K. 登録日 2022-10-07 公開日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.21 Å) 主引用文献 11 cysteine-to-serine mutations improve stability of cellodextrin phosphorylase from Clostridium thermocellum To Be Published
8HBK	The crystal structure of SARS-CoV-2 3CL protease in complex with Ensitrelvir 分子名称: 3C-like proteinase nsp5, 6-[(6-chloranyl-2-methyl-indazol-5-yl)amino]-3-[(1-methyl-1,2,4-triazol-3-yl)methyl]-1-[[2,4,5-tris(fluoranyl)phenyl]methyl]-1,3,5-triazine-2,4-dione 著者 Lin, M. 登録日 2022-10-29 公開日 2023-10-11 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Molecular mechanisms of SARS-CoV-2 resistance to nirmatrelvir. Nature, 622, 2023

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