Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5TBY
DownloadVisualize
BU of 5tby by Molmil
HUMAN BETA CARDIAC HEAVY MEROMYOSIN INTERACTING-HEADS MOTIF OBTAINED BY HOMOLOGY MODELING (USING SWISS-MODEL) OF HUMAN SEQUENCE FROM APHONOPELMA HOMOLOGY MODEL (PDB-3JBH), RIGIDLY FITTED TO HUMAN BETA-CARDIAC NEGATIVELY STAINED THICK FILAMENT 3D-RECONSTRUCTION (EMD-2240)
分子名称: Myosin light chain 3, Myosin regulatory light chain 2, ventricular/cardiac muscle isoform, ...
著者ALAMO, L, WARE, J.S, PINTO, A, GILLILAN, R.E, SEIDMAN, J.G, SEIDMAN, C.E, PADRON, R.
登録日2016-09-13
公開日2017-06-07
最終更新日2020-01-08
実験手法ELECTRON MICROSCOPY (20 Å)
主引用文献Effects of myosin variants on interacting-heads motif explain distinct hypertrophic and dilated cardiomyopathy phenotypes.
Elife, 6, 2017
5T15
DownloadVisualize
BU of 5t15 by Molmil
Structural basis for gating and activation of RyR1 (30 uM Ca2+ dataset, all particles)
分子名称: CALCIUM ION, Peptidyl-prolyl cis-trans isomerase FKBP1B, Ryanodine receptor 1,Ryanodine receptor 1,Ryanodine receptor 1,Ryanodine receptor 1,Ryanodine receptor 1,Ryanodine receptor 1,Ryanodine receptor 1, ...
著者Clarke, O.B, des Georges, A, Zalk, R, Marks, A.R, Hendrickson, W.A, Frank, J.
登録日2016-08-17
公開日2016-10-12
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structural Basis for Gating and Activation of RyR1.
Cell, 167, 2016
5T9S
DownloadVisualize
BU of 5t9s by Molmil
Structure of rabbit RyR1 (Ca2+-only dataset, class 4)
分子名称: CALCIUM ION, Peptidyl-prolyl cis-trans isomerase FKBP1B, Ryanodine receptor 1, ...
著者Clarke, O.B, des Georges, A, Zalk, R, Marks, A.R, Hendrickson, W.A, Frank, J.
登録日2016-09-09
公開日2016-10-12
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Structural Basis for Gating and Activation of RyR1.
Cell, 167, 2016
5T9M
DownloadVisualize
BU of 5t9m by Molmil
Structure of rabbit RyR1 (Ca2+-only dataset, class 1)
分子名称: CALCIUM ION, Peptidyl-prolyl cis-trans isomerase FKBP1B, Ryanodine receptor 1, ...
著者Clarke, O.B, des Georges, A, Zalk, R, Marks, A.R, Hendrickson, W.A, Frank, J.
登録日2016-09-09
公開日2016-10-12
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Structural Basis for Gating and Activation of RyR1.
Cell, 167, 2016
5T9R
DownloadVisualize
BU of 5t9r by Molmil
Structure of rabbit RyR1 (Ca2+-only dataset, class 3)
分子名称: CALCIUM ION, Peptidyl-prolyl cis-trans isomerase FKBP1B, Ryanodine receptor 1, ...
著者Clarke, O.B, des Georges, A, Zalk, R, Marks, A.R, Hendrickson, W.A, Frank, J.
登録日2016-09-09
公開日2016-10-12
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (5.8 Å)
主引用文献Structural Basis for Gating and Activation of RyR1.
Cell, 167, 2016
5TT2
DownloadVisualize
BU of 5tt2 by Molmil
Inactive conformation of engineered human cystathionine gamma lyase (E59N, R119L, E339V) to depleting methionine
分子名称: Cystathionine gamma-lyase, SULFATE ION
著者Yan, W, Zhang, Y.
登録日2016-10-31
公開日2017-10-11
最終更新日2019-11-27
実験手法X-RAY DIFFRACTION (2.949 Å)
主引用文献Structural Snapshots of an Engineered Cystathionine-gamma-lyase Reveal the Critical Role of Electrostatic Interactions in the Active Site.
Biochemistry, 56, 2017
6FG3
DownloadVisualize
BU of 6fg3 by Molmil
Structure of Ryanodine receptor 1 in nanodiscs in the presence of calcium, ATP and ryanodine
分子名称: CALCIUM ION, Ryanodine receptor 1, ZINC ION
著者Willegems, K, Efremov, R.G.
登録日2018-01-09
公開日2018-08-08
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (7.3 Å)
主引用文献Influence of Lipid Mimetics on Gating of Ryanodine Receptor.
Structure, 26, 2018
5TSU
DownloadVisualize
BU of 5tsu by Molmil
Active conformation for Engineered human cystathionine gamma lyase (E59N, R119L, E339V) to depleting methionine
分子名称: CYSTEINE, Cystathionine gamma-lyase, METHIONINE, ...
著者Yan, W, Zhang, Y.
登録日2016-10-31
公開日2017-10-11
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural Snapshots of an Engineered Cystathionine-gamma-lyase Reveal the Critical Role of Electrostatic Interactions in the Active Site.
Biochemistry, 56, 2017
8EFI
DownloadVisualize
BU of 8efi by Molmil
Helical reconstruction of the human cardiac actin-tropomyosin-myosin complex in the rigor form
分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha cardiac muscle 1, ...
著者Doran, M.H, Lehman, W, Rynkiewicz, M.J.
登録日2022-09-08
公開日2022-11-23
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Myosin loop-4 is critical for optimal tropomyosin repositioning on actin during muscle activation and relaxation.
J.Gen.Physiol., 155, 2023
8E57
DownloadVisualize
BU of 8e57 by Molmil
Rabbit L-type voltage-gated calcium channel Cav1.1 in the presence of Amiodarone and 100 microM MNI-1 at 2.8 Angstrom resolution
分子名称: (2-butyl-1-benzofuran-3-yl){4-[2-(diethylamino)ethoxy]-3,5-diiodophenyl}methanone, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Gao, S, Yao, X, Yan, N.
登録日2022-08-20
公開日2022-12-07
最終更新日2022-12-21
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structural basis for the severe adverse interaction of sofosbuvir and amiodarone on L-type Ca v channels.
Cell, 185, 2022
8E56
DownloadVisualize
BU of 8e56 by Molmil
Rabbit L-type voltage-gated calcium channel Cav1.1 in the presence of Amiodarone at 2.8 Angstrom resolution
分子名称: (2-butyl-1-benzofuran-3-yl){4-[2-(diethylamino)ethoxy]-3,5-diiodophenyl}methanone, 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Gao, S, Yao, X, Yan, N.
登録日2022-08-20
公開日2022-12-07
最終更新日2022-12-21
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structural basis for the severe adverse interaction of sofosbuvir and amiodarone on L-type Ca v channels.
Cell, 185, 2022
8E58
DownloadVisualize
BU of 8e58 by Molmil
Rabbit L-type voltage-gated calcium channel Cav1.1 in the presence of Amiodarone and 1 mM MNI-1 at 3.0 Angstrom resolution
分子名称: (2-butyl-1-benzofuran-3-yl){4-[2-(diethylamino)ethoxy]-3,5-diiodophenyl}methanone, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Gao, S, Yao, X, Yan, N.
登録日2022-08-20
公開日2022-12-07
最終更新日2022-12-21
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural basis for the severe adverse interaction of sofosbuvir and amiodarone on L-type Ca v channels.
Cell, 185, 2022
8E96
DownloadVisualize
BU of 8e96 by Molmil
Glycine and glutamate bound Human GluN1a-GluN2D NMDA receptor
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLUTAMIC ACID, GLYCINE, ...
著者Kang, H, Furukawa, H.
登録日2022-08-26
公開日2022-12-07
最終更新日2022-12-14
実験手法ELECTRON MICROSCOPY (3.38 Å)
主引用文献Structural insights into assembly and function of GluN1-2C, GluN1-2A-2C, and GluN1-2D NMDARs.
Mol.Cell, 82, 2022
8DRP
DownloadVisualize
BU of 8drp by Molmil
Focus/local refined map in C4 of signal subtracted RyR1 particles
分子名称: ADENOSINE-5'-TRIPHOSPHATE, CAFFEINE, Ryanodine receptor 1, ...
著者Haji-Ghassemi, O, Van Petegm, F.
登録日2022-07-21
公開日2023-05-31
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (2.84 Å)
主引用文献Cryo-EM analysis of scorpion toxin binding to Ryanodine Receptors reveals subconductance that is abolished by PKA phosphorylation.
Sci Adv, 9, 2023
8DTB
DownloadVisualize
BU of 8dtb by Molmil
Focus/local refined map in C1 of signal subtracted RyR1 particles in complex with ImperaCalcin
分子名称: ADENOSINE-5'-TRIPHOSPHATE, CAFFEINE, Imperacalcin, ...
著者Haji-Ghassemi, O, Van Petegm, F.
登録日2022-07-25
公開日2023-05-31
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.14 Å)
主引用文献Cryo-EM analysis of scorpion toxin binding to Ryanodine Receptors reveals subconductance that is abolished by PKA phosphorylation.
Sci Adv, 9, 2023
8DTY
DownloadVisualize
BU of 8dty by Molmil
Recombinant mouse RyR2 triple phosphomimetic mutant S2807D/S2813D/S2030D in complex with FKBP12.6 and nanodisc under closed-state conditions
分子名称: Peptidyl-prolyl cis-trans isomerase FKBP1B, Ryanodine receptor 2, ZINC ION
著者Iyer, K.A, Hu, Y, Murayama, T, Samso, M.
登録日2022-07-26
公開日2024-01-31
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Recombinant mouse RyR2 triple phosphomimetic mutant S2807D/S2813D/S2030D in complex with FKBP12.6 and nanodisc under closed-state conditions
To Be Published
8DVV
DownloadVisualize
BU of 8dvv by Molmil
Recombinant mouse RyR2 triple phosphomimetic mutant S2807D/S2813D/S2030D in complex with FKBP12.6 and nanodisc under open-state conditions
分子名称: CALCIUM ION, Peptidyl-prolyl cis-trans isomerase FKBP1B, Ryanodine receptor 2, ...
著者Iyer, K.A, Hu, Y, Murayama, T, Samso, M.
登録日2022-07-29
公開日2024-01-31
実験手法ELECTRON MICROSCOPY (3.68 Å)
主引用文献Recombinant mouse RyR2 triple phosphomimetic mutant S2807D/S2813D/S2030D in complex with FKBP12.6 and nanodisc under open-state conditions
To Be Published
8DTZ
DownloadVisualize
BU of 8dtz by Molmil
Recombinant mouse RyR2 triple phosphonull mutant S2807A/S2813A/S2030A in complex with FKBP12.6 and nanodisc under closed-state conditions
分子名称: Peptidyl-prolyl cis-trans isomerase FKBP1B, Ryanodine receptor 2, ZINC ION
著者Iyer, K.A, Hu, Y, Murayama, T, Samso, M.
登録日2022-07-26
公開日2024-01-31
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Recombinant mouse RyR2 triple phosphonull mutant S2807A/S2813A/S2030A in complex with FKBP12.6 and nanodisc under closed-state conditions
To Be Published
8EMV
DownloadVisualize
BU of 8emv by Molmil
Phospholipase C beta 3 (PLCb3) in solution
分子名称: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3, CALCIUM ION
著者Falzone, M.E, MacKinnon, R.
登録日2022-09-28
公開日2023-05-24
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献G beta gamma activates PIP2 hydrolysis by recruiting and orienting PLC beta on the membrane surface.
Proc.Natl.Acad.Sci.USA, 120, 2023
8EMW
DownloadVisualize
BU of 8emw by Molmil
Phospholipase C beta 3 (PLCb3) in complex with Gbg on liposomes
分子名称: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3, CALCIUM ION, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
著者Falzone, M.E, MacKinnon, R.
登録日2022-09-28
公開日2023-05-24
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献G beta gamma activates PIP2 hydrolysis by recruiting and orienting PLC beta on the membrane surface.
Proc.Natl.Acad.Sci.USA, 120, 2023
8EMX
DownloadVisualize
BU of 8emx by Molmil
Phospholipase C beta 3 (PLCb3) in complex with Gbg on lipid nanodiscs
分子名称: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3, CALCIUM ION, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
著者Falzone, M.E, MacKinnon, R.
登録日2022-09-28
公開日2023-05-24
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献G beta gamma activates PIP2 hydrolysis by recruiting and orienting PLC beta on the membrane surface.
Proc.Natl.Acad.Sci.USA, 120, 2023
8ENC
DownloadVisualize
BU of 8enc by Molmil
Helical reconstruction of the human cardiac actin-tropomyosin-myosin loop 4 7G mutant complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha cardiac muscle 1, ...
著者Doran, M.H, Lehman, W, Rynkiewicz, M.J.
登録日2022-09-29
公開日2022-11-23
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Myosin loop-4 is critical for optimal tropomyosin repositioning on actin during muscle activation and relaxation.
J.Gen.Physiol., 155, 2023
6J8E
DownloadVisualize
BU of 6j8e by Molmil
Human Nav1.2-beta2-KIIIA ternary complex
分子名称: (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Pan, X, Li, Z, Huang, X, Huang, G, Yan, N.
登録日2019-01-18
公開日2019-02-27
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Molecular basis for pore blockade of human Na+channel Nav1.2 by the mu-conotoxin KIIIA.
Science, 363, 2019
6WOV
DownloadVisualize
BU of 6wov by Molmil
Cryo-EM structure of recombinant mouse Ryanodine Receptor type 2 wild type in complex with FKBP12.6
分子名称: Peptidyl-prolyl cis-trans isomerase FKBP1B, Ryanodine receptor 2, ZINC ION
著者Iyer, K.A, Hu, Y, Nayak, A.R, Kurebayashi, N, Murayama, T, Samso, M.
登録日2020-04-25
公開日2020-08-05
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (5.1 Å)
主引用文献Structural mechanism of two gain-of-function cardiac and skeletal RyR mutations at an equivalent site by cryo-EM.
Sci Adv, 6, 2020
6WOU
DownloadVisualize
BU of 6wou by Molmil
Cryo-EM structure of recombinant mouse Ryanodine Receptor type 2 mutant R176Q in complex with FKBP12.6 in nanodisc
分子名称: Peptidyl-prolyl cis-trans isomerase FKBP1B, Ryanodine receptor 2, ZINC ION
著者Iyer, K.A, Hu, Y, Kurebayashi, N, Murayama, T, Samso, M.
登録日2020-04-25
公開日2020-08-05
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.27 Å)
主引用文献Structural mechanism of two gain-of-function cardiac and skeletal RyR mutations at an equivalent site by cryo-EM.
Sci Adv, 6, 2020

222926

件を2024-07-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon