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8FXP
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BU of 8fxp by Molmil
Structure of capsid of Agrobacterium phage Milano
分子名称: Linking protein 1, gp16, Linking protein 2, ...
著者Sonani, R.R, Wang, F, Esteves, N.C, Kelly, R.J, Sebastian, A, Kreutzberger, M.A.B, Leiman, P.G, Scharf, B.E, Egelman, E.H.
登録日2023-01-25
公開日2023-12-06
実験手法ELECTRON MICROSCOPY (4.04 Å)
主引用文献Neck and capsid architecture of the robust Agrobacterium phage Milano.
Commun Biol, 6, 2023
8FWB
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BU of 8fwb by Molmil
Portal assembly of Agrobacterium phage Milano
分子名称: Portal protein, gp7
著者Sonani, R.R, Wang, F, Esteves, N.C, Kelly, R.J, Sebastian, A, Kreutzberger, M.A.B, Leiman, P.G, Scharf, B.E, Egelman, E.H.
登録日2023-01-20
公開日2023-12-06
実験手法ELECTRON MICROSCOPY (3.14 Å)
主引用文献Neck and capsid architecture of the robust Agrobacterium phage Milano.
Commun Biol, 6, 2023
8FXR
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BU of 8fxr by Molmil
Structure of neck with portal vertex of capsid of Agrobacterium phage Milano
分子名称: Collar sheath protein, gp13, Linking protein 1, ...
著者Sonani, R.R, Wang, F, Esteves, N.C, Kelly, R.J, Sebastian, A, Kreutzberger, M.A.B, Leiman, P.G, Scharf, B.E, Egelman, E.H.
登録日2023-01-25
公開日2023-12-06
最終更新日2024-11-06
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Neck and capsid architecture of the robust Agrobacterium phage Milano.
Commun Biol, 6, 2023
8FWG
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BU of 8fwg by Molmil
Structure of neck and portal vertex of Agrobacterium phage Milano, C5 symmetry
分子名称: Collar sheath protein, gp13, Linking protein 1, ...
著者Sonani, R.R, Wang, F, Esteves, N.C, Kelly, R.J, Sebastian, A, Kreutzberger, M.A.B, Leiman, P.G, Scharf, B.E, Egelman, E.H.
登録日2023-01-22
公開日2023-12-06
実験手法ELECTRON MICROSCOPY (3.45 Å)
主引用文献Neck and capsid architecture of the robust Agrobacterium phage Milano.
Commun Biol, 6, 2023
8FWC
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BU of 8fwc by Molmil
Collar sheath structure of Agrobacterium phage Milano
分子名称: Collar sheath protein, gp13
著者Sonani, R.R, Wang, F, Esteves, N.C, Kelly, R.J, Sebastian, A, Kreutzberger, M.A.B, Leiman, P.G, Scharf, B.E, Egelman, E.H.
登録日2023-01-20
公開日2023-12-06
最終更新日2024-11-06
実験手法ELECTRON MICROSCOPY (2.96 Å)
主引用文献Neck and capsid architecture of the robust Agrobacterium phage Milano.
Commun Biol, 6, 2023
8FWE
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BU of 8fwe by Molmil
Neck structure of Agrobacterium phage Milano, C3 symmetry
分子名称: Collar sheath protein, gp13, Neck 1 protein, ...
著者Sonani, R.R, Wang, F, Esteves, N.C, Kelly, R.J, Sebastian, A, Kreutzberger, M.A.B, Leiman, P.G, Scharf, B.E, Egelman, E.H.
登録日2023-01-21
公開日2023-12-06
最終更新日2024-11-06
実験手法ELECTRON MICROSCOPY (3.46 Å)
主引用文献Neck and capsid architecture of the robust Agrobacterium phage Milano.
Commun Biol, 6, 2023
3QAL
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BU of 3qal by Molmil
Crystal Structure of Arg280Ala mutant of Catalytic subunit of cAMP-dependent Protein Kinase
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Protein kinase inhibitor, ...
著者Yang, J, Wu, J, Steichen, J, Taylor, S.S.
登録日2011-01-11
公開日2011-12-07
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献A conserved Glu-Arg salt bridge connects coevolved motifs that define the eukaryotic protein kinase fold.
J.Mol.Biol., 415, 2012
8FPS
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BU of 8fps by Molmil
GluA2 flip Q isoform N619K mutant of AMPA receptor in complex with gain-of-function TARP gamma-2, with 10mM CaCl2, 150mM NaCl, 1mM MgCl2, 330uM CTZ, and 100mM glutamate (Open-CaNaMg/N619K)
分子名称: CHLORIDE ION, Glutamate receptor 2, Voltage-dependent calcium channel gamma-2 subunit
著者Nakagawa, T.
登録日2023-01-05
公開日2024-02-28
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (2.38 Å)
主引用文献The open gate of the AMPA receptor forms a Ca 2+ binding site critical in regulating ion transport.
Nat.Struct.Mol.Biol., 31, 2024
8FP4
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BU of 8fp4 by Molmil
GluA2 flip Q isoform of AMPA receptor in complex with gain-of-function TARP gamma-2, with 500mM NaCl, 330uM CTZ, and 100mM glutamate (Open-Na610)
分子名称: CHLORIDE ION, Glutamate receptor 2, Voltage-dependent calcium channel gamma-2 subunit
著者Nakagawa, T.
登録日2023-01-04
公開日2024-02-28
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献The open gate of the AMPA receptor forms a Ca 2+ binding site critical in regulating ion transport.
Nat.Struct.Mol.Biol., 31, 2024
8FP9
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BU of 8fp9 by Molmil
GluA2 flip Q isoform of AMPA receptor in complex with gain-of-function TARP gamma-2, with 10mM CaCl2, 150mM NaCl, 1mM MgCl2, 330uM CTZ, and 100mM glutamate (Open-CaNaMg)
分子名称: CALCIUM ION, CHLORIDE ION, Glutamate receptor 2, ...
著者Nakagawa, T.
登録日2023-01-04
公開日2024-02-28
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (2.44 Å)
主引用文献The open gate of the AMPA receptor forms a Ca 2+ binding site critical in regulating ion transport.
Nat.Struct.Mol.Biol., 31, 2024
8FQ1
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BU of 8fq1 by Molmil
GluA2 flip Q isoform of AMPA receptor in complex with gain-of-function TARP gamma2, with 150mM CaCl2, 330uM CTZ, and 100mM L-glutamate (Open-Ca150)
分子名称: CALCIUM ION, Glutamate receptor 2, Voltage-dependent calcium channel gamma-2 subunit
著者Nakagawa, T.
登録日2023-01-05
公開日2024-02-28
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (5.59 Å)
主引用文献The open gate of the AMPA receptor forms a Ca 2+ binding site critical in regulating ion transport.
Nat.Struct.Mol.Biol., 31, 2024
3QHE
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BU of 3qhe by Molmil
Crystal structure of the complex between the armadillo repeat domain of adenomatous polyposis coli and the tyrosine-rich domain of Sam68
分子名称: Adenomatous polyposis coli protein, KH domain-containing, RNA-binding, ...
著者Morishita, E.C.J, Murayama, K, Kato-Murayama, M, Ishizuku-Katsura, Y, Tomabechi, Y, Terada, T, Handa, N, Shirouzu, M, Akiyama, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2011-01-25
公開日2011-11-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structures of the armadillo repeat domain of adenomatous polyposis coli and its complex with the tyrosine-rich domain of sam68
Structure, 19, 2011
8FQ5
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BU of 8fq5 by Molmil
GluA2 flip Q isoform of AMPA receptor in complex with gain-of-function TARP gamma2, with 140mM NMDG, 330uM CTZ, and 100mM L-glutamate (Open-Na110)
分子名称: CHLORIDE ION, Glutamate receptor 2, Voltage-dependent calcium channel gamma-2 subunit
著者Nakagawa, T.
登録日2023-01-05
公開日2024-02-28
最終更新日2024-10-09
実験手法ELECTRON MICROSCOPY (2.34 Å)
主引用文献The open gate of the AMPA receptor forms a Ca 2+ binding site critical in regulating ion transport.
Nat.Struct.Mol.Biol., 31, 2024
8FQF
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BU of 8fqf by Molmil
GluA2 flip Q isoform of AMPA receptor in complex with gain-of-function TARP gamma-2, with 150mM NaCl, 330uM CTZ, and 100mM glutamate (Open-Na260)
分子名称: CHLORIDE ION, Glutamate receptor 2, Voltage-dependent calcium channel gamma-2 subunit
著者Nakagawa, T.
登録日2023-01-06
公開日2024-02-28
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (2.29 Å)
主引用文献The open gate of the AMPA receptor forms a Ca 2+ binding site critical in regulating ion transport.
Nat.Struct.Mol.Biol., 31, 2024
8FPG
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BU of 8fpg by Molmil
GluA2 flip Q isoform of AMPA receptor in complex with gain-of-function TARP gamma-2, with 10mM CaCl2, 150mM NaCl, 1mM MgCl2, 330uM CTZ, and 100uM CNQX (Closed-CaNaMg)
分子名称: CHLORIDE ION, Glutamate receptor 2, Voltage-dependent calcium channel gamma-2 subunit
著者Nakagawa, T.
登録日2023-01-04
公開日2024-02-28
最終更新日2024-10-30
実験手法ELECTRON MICROSCOPY (2.32 Å)
主引用文献The open gate of the AMPA receptor forms a Ca 2+ binding site critical in regulating ion transport.
Nat.Struct.Mol.Biol., 31, 2024
8FQB
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BU of 8fqb by Molmil
GluA2 flip Q isoform of AMPA receptor in complex with gain-of-function TARP gamma2, with 10mM CaCl2, 140mM NMDG, 330uM CTZ, and 100mM L-glutamate (Open-Ca10)
分子名称: CALCIUM ION, CHLORIDE ION, Glutamate receptor 2, ...
著者Nakagawa, T.
登録日2023-01-05
公開日2024-02-28
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (2.36 Å)
主引用文献The open gate of the AMPA receptor forms a Ca 2+ binding site critical in regulating ion transport.
Nat.Struct.Mol.Biol., 31, 2024
8GIN
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BU of 8gin by Molmil
Structure of Ternary Complex of mouse cGAS with dsDNA and Bound ATP: with 10mM Mg2+ and 0.015mM Mn2+
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Cyclic GMP-AMP synthase, MAGNESIUM ION, ...
著者Wu, S, Sohn, J.
登録日2023-03-14
公開日2024-05-22
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献The structural basis for 2'-5'/3'-5'-cGAMP synthesis by cGAS.
Nat Commun, 15, 2024
8GME
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BU of 8gme by Molmil
Crystal structure of the gp32-Dda-dT17 complex
分子名称: Dda helicase, ZINC ION, dT17, ...
著者He, X, Yun, M.K, White, S.W.
登録日2023-03-24
公開日2023-06-28
最終更新日2024-10-02
実験手法X-RAY DIFFRACTION (4.98 Å)
主引用文献Crystal structure of the gp32-Dda-dT17 complex
To Be Published
3POO
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BU of 3poo by Molmil
human cAMP-dependent protein kinase in complex with an inhibitor
分子名称: (2S,3S)-butane-2,3-diol, N'-[(E)-(2,4-dihydroxy-6-methylphenyl)methylidene]-2-(3-methoxyphenyl)acetohydrazide, cAMP-dependent protein kinase catalytic subunit alpha, ...
著者Koester, H, Heine, A, Klebe, G.
登録日2010-11-23
公開日2011-11-16
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献fragment based drug design on PKA
To be Published
3PVB
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BU of 3pvb by Molmil
Crystal structure of (73-244)RIa:C holoenzyme of cAMP-dependent Protein kinase
分子名称: GLYCEROL, MANGANESE (II) ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Boettcher, A.J, Wu, J, Kim, C, Yang, J, Bruystens, J, Cheung, N, Pennypacker, J.K, Blumenthal, D.A, Kornev, A.P, Taylor, S.S.
登録日2010-12-06
公開日2011-02-02
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Crystal structure of (73-244)RIa:C holoenzyme of cAMP-dependent Protein kinase
Structure, 19, 2011
8GQ5
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BU of 8gq5 by Molmil
Human SARM1 bounded with NMN and Nanobody-C6, double-layer structure
分子名称: NAD(+) hydrolase SARM1, Nanobody C6
著者Cai, Y, Zhang, H.
登録日2022-08-29
公開日2023-01-18
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献A conformation-specific nanobody targeting the nicotinamide mononucleotide-activated state of SARM1.
Nat Commun, 13, 2022
8GNI
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BU of 8gni by Molmil
Human SARM1 bounded with NMN and Nanobody-C6, Conformation 1
分子名称: BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, NAD(+) hydrolase SARM1, Nanobody C6
著者Cai, Y, Zhang, H.
登録日2022-08-24
公開日2023-01-18
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (3.74 Å)
主引用文献A conformation-specific nanobody targeting the nicotinamide mononucleotide-activated state of SARM1.
Nat Commun, 13, 2022
8GPN
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BU of 8gpn by Molmil
Human menin in complex with H3K79Me2 nucleosome
分子名称: DNA (177-MER), Histone H2A type 1, Histone H2B 1.1, ...
著者Lin, J, Yu, D, Lam, W.H, Dang, S, Zhai, Y, Li, X.D.
登録日2022-08-26
公開日2023-02-15
最終更新日2023-03-01
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Menin "reads" H3K79me2 mark in a nucleosomal context.
Science, 379, 2023
3S6X
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BU of 3s6x by Molmil
Structure of reovirus attachment protein sigma1 in complex with alpha-2,3-sialyllactose
分子名称: N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, Outer capsid protein sigma-1
著者Reiter, D.M, Dermody, T.S, Stehle, T.
登録日2011-05-26
公開日2011-11-23
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystal structure of reovirus attachment protein sigma1 in complex with sialylated oligosaccharides
Plos Pathog., 7, 2011
8GNE
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BU of 8gne by Molmil
Crystal structure of human adenosine A2A receptor in complex with an insurmountable inverse agonist, KW-6356.
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, Adenosine receptor A2a,Soluble cytochrome b562, ...
著者Suzuki, M, Saito, J, Miyagi, H, Yasunaga, M.
登録日2022-08-23
公開日2023-03-22
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献In Vitro Pharmacological Profile of KW-6356, a Novel Adenosine A 2A Receptor Antagonist/Inverse Agonist.
Mol.Pharmacol., 103, 2023

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件を2024-11-06に公開中

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