Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6JLG
DownloadVisualize
BU of 6jlg by Molmil
Crystal Structure of HasAp with Co-9,10,19,20-Tetraphenylporphycene
分子名称: GLYCEROL, Heme acquisition protein HasA, PHOSPHATE ION, ...
著者Sakakibara, E, Shisaka, Y, Onoda, H, Sugimoto, H, Shiro, Y, Watanabe, Y, Shoji, O.
登録日2019-03-05
公開日2020-03-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Highly malleable haem-binding site of the haemoprotein HasA permits stable accommodation of bulky tetraphenylporphycenes.
Rsc Adv, 9, 2019
2RMH
DownloadVisualize
BU of 2rmh by Molmil
Human Urocortin 3
分子名称: Urocortin-3
著者Grace, C.R.R, Perrin, M.H, Cantle, J.P, Vale, W.W, Rivier, J.E, Riek, R.
登録日2007-10-16
公開日2008-01-01
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Common and divergent structural features of a series of corticotropin releasing factor-related peptides
J.Am.Chem.Soc., 129, 2007
2RMN
DownloadVisualize
BU of 2rmn by Molmil
The solution structure of the p63 DNA-binding domain
分子名称: Tumor protein 63, ZINC ION
著者Enthart, A, Kessler, H.
登録日2007-11-01
公開日2008-11-11
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution structure and binding specificity of the p63 DNA binding domain
Sci Rep, 6, 2016
2TIR
DownloadVisualize
BU of 2tir by Molmil
CRYSTAL STRUCTURE ANALYSIS OF A MUTANT ESCHERICHIA COLI THIOREDOXIN IN WHICH LYSINE 36 IS REPLACED BY GLUTAMIC ACID
分子名称: COPPER (II) ION, THIOREDOXIN
著者Nikkola, M, Gleason, F.K, Fuchs, J.A, Eklund, H.
登録日1993-01-10
公開日1993-10-31
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure analysis of a mutant Escherichia coli thioredoxin in which lysine 36 is replaced by glutamic acid.
Biochemistry, 32, 1993
8GZ4
DownloadVisualize
BU of 8gz4 by Molmil
Crystal structure of MPXV phosphatase
分子名称: Dual specificity protein phosphatase H1, PHOSPHATE ION
著者Yang, H.T, Wang, W, Huang, H.J, Ji, X.Y.
登録日2022-09-25
公開日2023-05-17
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.802 Å)
主引用文献Crystal structure of monkeypox H1 phosphatase, an antiviral drug target.
Protein Cell, 14, 2023
6JN0
DownloadVisualize
BU of 6jn0 by Molmil
Structure of H247A mutant peptidoglycan peptidase complex with tetra-tri peptide
分子名称: C0O-DAL-API, Peptidase M23, ZINC ION
著者Min, K.J, An, D.R, Yoon, H.J, Suh, S.W, Lee, H.H.
登録日2019-03-13
公開日2020-01-15
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.164 Å)
主引用文献Peptidoglycan reshaping by a noncanonical peptidase for helical cell shape in Campylobacter jejuni.
Nat Commun, 11, 2020
6JN7
DownloadVisualize
BU of 6jn7 by Molmil
Structure of H216A mutant closed form peptidoglycan peptidase
分子名称: D(-)-TARTARIC ACID, Peptidase M23, ZINC ION
著者Min, K.J, An, D.R, Yoon, H.J, Suh, S.W, Lee, H.H.
登録日2019-03-13
公開日2020-01-15
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Peptidoglycan reshaping by a noncanonical peptidase for helical cell shape in Campylobacter jejuni.
Nat Commun, 11, 2020
2RO8
DownloadVisualize
BU of 2ro8 by Molmil
Solution structure of calcium bound soybean calmodulin isoform 1 N-terminal domain
分子名称: CALCIUM ION, Calmodulin
著者Ishida, H, Huang, H, Yamniuk, A.P, Takaya, Y, Vogel, H.J.
登録日2008-03-14
公開日2008-04-08
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献The solution structures of two soybean calmodulin isoforms provide a structural basis for their selective target activation properties
J.Biol.Chem., 283, 2008
6JP6
DownloadVisualize
BU of 6jp6 by Molmil
The X-ray structure of yeast tRNA methyltransferase complex of Trm7 and Trm734 essential for 2'-O-methylation at the first position of anticodon in specific tRNAs
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, SULFATE ION, tRNA (cytidine(34)/guanosine(34)-2'-O)-methyltransferase, ...
著者Hirata, A, Okada, K, Yoshii, K, Shiraisi, H, Saijo, S, Yonezawa, K, Sihimzu, N, Hori, H.
登録日2019-03-26
公開日2019-10-02
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.699 Å)
主引用文献Structure of tRNA methyltransferase complex of Trm7 and Trm734 reveals a novel binding interface for tRNA recognition.
Nucleic Acids Res., 47, 2019
2ROL
DownloadVisualize
BU of 2rol by Molmil
Structural Basis of PxxDY motif recognition in SH3 binding
分子名称: 12-meric peptide from T-cell surface glycoprotein CD3 epsilon chain, Epidermal growth factor receptor kinase substrate 8-like protein 1
著者Aitio, O, Hellman, M, Kesti, T, Kleino, I, Samuilova, O, Tossavainen, H, Paakkonen, K, Saksela, K, Permi, P.
登録日2008-04-02
公開日2009-03-03
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural basis of PxxDY motif recognition in SH3 binding
J.Mol.Biol., 382, 2008
8GZF
DownloadVisualize
BU of 8gzf by Molmil
Crystal Structure of METTL9-SAH
分子名称: Protein-L-histidine N-pros-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
著者Zhao, W.T, Li, H.T.
登録日2022-09-26
公開日2023-05-31
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Molecular basis for protein histidine N1-specific methylation of the "His-x-His" motifs by METTL9.
Cell Insight, 2, 2023
6A3H
DownloadVisualize
BU of 6a3h by Molmil
2-DEOXY-2-FLURO-B-D-CELLOTRIOSYL/ENZYME INTERMEDIATE COMPLEX OF THE ENDOGLUCANASE CEL5A FROM BACILLUS AGARADHEARANS AT 1.6 ANGSTROM RESOLUTION
分子名称: ENDOGLUCANASE, GLYCEROL, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-2-deoxy-2-fluoro-alpha-D-glucopyranose
著者Davies, G.J, Varrot, A, Dauter, M, Brzozowski, A.M, Schulein, M, Mackenzie, L, Withers, S.G.
登録日1998-07-22
公開日1999-07-24
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献Snapshots along an enzymatic reaction coordinate: analysis of a retaining beta-glycoside hydrolase.
Biochemistry, 37, 1998
2RJX
DownloadVisualize
BU of 2rjx by Molmil
Crystal structure of the headpiece domain of chicken villin, P61 space group
分子名称: Villin-1
著者Meng, J, Mcknight, C.J.
登録日2007-10-16
公開日2009-02-17
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Heterogeneity and dynamics in villin headpiece crystal structures.
Acta Crystallogr.,Sect.D, 65, 2009
8HI5
DownloadVisualize
BU of 8hi5 by Molmil
Crystal structure of the NADP+ and MSA bound C terminal domain of bi-functional malonyl-CoA reductase from Roseiflexus castenholzii
分子名称: 3-oxidanylidenepropanoic acid, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Short-chain dehydrogenase/reductase SDR
著者Zhang, X, Wu, W.P, Xu, X.
登録日2022-11-18
公開日2023-05-31
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis of a bi-functional malonyl-CoA reductase (MCR) from the photosynthetic green non-sulfur bacterium Roseiflexus castenholzii.
Mbio, 14, 2023
6JJG
DownloadVisualize
BU of 6jjg by Molmil
Crystal structure of a two-quartet DNA mixed-parallel/antiparallel G-quadruplex
分子名称: DNA (5'-D(*GP*GP*CP*TP*CP*GP*GP*CP*GP*GP*CP*GP*GP*A)-3'), POTASSIUM ION, SODIUM ION
著者Zhang, Y.S, Wei, D.G.
登録日2019-02-25
公開日2020-02-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.969 Å)
主引用文献Crystal structure of a two-quartet DNA mixed-parallel/antiparallel G-quadruplex
To Be Published
2RK3
DownloadVisualize
BU of 2rk3 by Molmil
Structure of A104T DJ-1
分子名称: Protein DJ-1
著者Lakshminarasimhan, M, Maldonado, M.T, Zhou, W, Fink, A.L, Wilson, M.A.
登録日2007-10-16
公開日2008-01-15
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Structural Impact of Three Parkinsonism-Associated Missense Mutations on Human DJ-1.
Biochemistry, 47, 2008
2RP4
DownloadVisualize
BU of 2rp4 by Molmil
Solution Structure of the oligomerization domain in Dmp53
分子名称: Transcription factor p53
著者Ou, H.D, Doetsch, V.
登録日2008-04-30
公開日2008-05-27
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Structural evolution of C-terminal domains in the p53 family
Embo J., 26, 2007
2RR0
DownloadVisualize
BU of 2rr0 by Molmil
Structure of epidermal growth factor-like repeat 12 of mouse Notch-1 receptor
分子名称: Neurogenic locus notch homolog protein 1
著者Hosoguchi, K, Shimizu, K, Fujitani, N, Nishimura, S.
登録日2010-02-26
公開日2010-10-13
最終更新日2024-10-16
実験手法SOLUTION NMR
主引用文献Chemical Synthesis, Folding, and Structural Insights into O-Fucosylated Epidermal Growth Factor-like Repeat 12 of Mouse Notch-1 Receptor
J.Am.Chem.Soc., 132, 2010
8HDJ
DownloadVisualize
BU of 8hdj by Molmil
Periplasmic domain of RsgI2 of Clostridium thermocellum
分子名称: Anti-sigma-I factor RsgI2, Periplasmic domain of RsgI2
著者Chen, C, Dong, S, Feng, Y.G.
登録日2022-11-04
公開日2023-05-17
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Essential autoproteolysis of bacterial anti-sigma factor RsgI for transmembrane signal transduction.
Sci Adv, 9, 2023
2RTT
DownloadVisualize
BU of 2rtt by Molmil
Solution structure of the chitin-binding domain of Chi18aC from Streptomyces coelicolor
分子名称: ChiC
著者Okumura, A, Uemura, M, Yamada, N, Chikaishi, E, Takai, T, Yoshio, S, Akagi, K, Morita, J, Lee, Y, Yokogawa, D, Suzuki, K, Watanabe, T, Ikegami, T.
登録日2013-08-26
公開日2014-08-27
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution structure of the Chitin-binding domain of chitinase Chi18aC from Streptomyces coelicolor
To be Published
8H6D
DownloadVisualize
BU of 8h6d by Molmil
Crystal structure of human GCN5 histone acetyltransferase domain bound with glutaryl-CoA
分子名称: Histone acetyltransferase KAT2A, glutaryl-coenzyme A
著者Li, N, Tao, Y.J, Guo, Y.R.
登録日2022-10-16
公開日2023-05-03
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.26 Å)
主引用文献Molecular Basis of KAT2A Selecting Acyl-CoA Cofactors for Histone Modifications.
Res, 6, 2023
1IJF
DownloadVisualize
BU of 1ijf by Molmil
Nucleotide exchange mechanisms in the eEF1A-eEF1Ba complex
分子名称: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, elongation factor 1-alpha, ...
著者Andersen, G.R, Valente, L, Pedersen, L, Kinzy, T.G, Nyborg, J.
登録日2001-04-26
公開日2001-05-09
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structures of nucleotide exchange intermediates in the eEF1A-eEF1Balpha complex.
Nat.Struct.Biol., 8, 2001
8H08
DownloadVisualize
BU of 8h08 by Molmil
SARS-CoV-2 BA.1 variants S ectodomain trimer in complex with neutralizing antibody 10-5B and 6-2C
分子名称: 10-5B H chain, 10-5B L chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Wang, X, Wang, Z.
登録日2022-09-28
公開日2023-05-31
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Inactivated vaccine-elicited potent antibodies can broadly neutralize SARS-CoV-2 circulating variants.
Nat Commun, 14, 2023
6JKK
DownloadVisualize
BU of 6jkk by Molmil
Crystal structure of BubR1 kinase domain
分子名称: DI(HYDROXYETHYL)ETHER, GLYCEROL, Mitotic checkpoint control protein kinase BUB1
著者Lin, L, Ye, S, Huang, Y, Liu, X, Zhang, R, Yao, X.
登録日2019-03-01
公開日2019-06-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献BubR1 phosphorylates CENP-E as a switch enabling the transition from lateral association to end-on capture of spindle microtubules.
Cell Res., 29, 2019
2SGE
DownloadVisualize
BU of 2sge by Molmil
GLU 18 VARIANT OF TURKEY OVOMUCOID INHIBITOR THIRD DOMAIN COMPLEXED WITH STREPTOMYCES GRISEUS PROTEINASE B AT PH 10.7
分子名称: Ovomucoid, PHOSPHATE ION, POTASSIUM ION, ...
著者Huang, K, Lu, W, Anderson, S, Laskowski Jr, M, James, M.N.G.
登録日1999-03-25
公開日2003-08-26
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Water molecules participate in proteinase-inhibitor interactions: crystal structures of Leu18, Ala18, and Gly18 variants of turkey ovomucoid inhibitor third domain complexed with Streptomyces griseus proteinase B.
Protein Sci., 4, 1995

226262

件を2024-10-16に公開中

PDB statisticsPDBj update infoContact PDBjnumon