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PDB: 14 results

5Z8B
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Truncated N-acetylglucosaminyl transferase KfiA from E. coli K5 strain apo form
Descriptor: KfiA protein
Authors:Hori, H, Kakuta, Y.
Deposit date:2018-01-31
Release date:2019-02-06
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.91 Å)
Cite:Crysta structure of N-acetylglucosaminyl transferase KfiA from E. coli K5 strain
To Be Published
1QQ2
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CRYSTAL STRUCTURE OF A MAMMALIAN 2-CYS PEROXIREDOXIN, HBP23.
Descriptor: CHLORIDE ION, THIOREDOXIN PEROXIDASE 2
Authors:Hirotsu, S, Abe, Y, Okada, K, Nagahara, N, Hori, H, Nishino, T, Hakoshima, T.
Deposit date:1999-06-10
Release date:1999-10-29
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of a multifunctional 2-Cys peroxiredoxin heme-binding protein 23 kDa/proliferation-associated gene product.
Proc.Natl.Acad.Sci.USA, 96, 1999
3G5S
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BU of 3g5s by Molmil
Crystal structure of Thermus thermophilus TrmFO in complex with glutathione
Descriptor: 1,2-ETHANEDIOL, FLAVIN-ADENINE DINUCLEOTIDE, GLUTATHIONE, ...
Authors:Nishimasu, H, Ishitani, R, Hori, H, Nureki, O.
Deposit date:2009-02-05
Release date:2009-05-19
Last modified:2011-12-14
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Atomic structure of a folate/FAD-dependent tRNA T54 methyltransferase
Proc.Natl.Acad.Sci.USA, 106, 2009
3G5Q
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Crystal structure of Thermus thermophilus TrmFO
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, FLAVIN-ADENINE DINUCLEOTIDE, Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmFO
Authors:Nishimasu, H, Ishitani, R, Hori, H, Nureki, O.
Deposit date:2009-02-05
Release date:2009-05-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.102 Å)
Cite:Atomic structure of a folate/FAD-dependent tRNA T54 methyltransferase
Proc.Natl.Acad.Sci.USA, 106, 2009
3G5R
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BU of 3g5r by Molmil
Crystal structure of Thermus thermophilus TrmFO in complex with tetrahydrofolate
Descriptor: (6S)-5,6,7,8-TETRAHYDROFOLATE, 1,2-ETHANEDIOL, CALCIUM ION, ...
Authors:Nishimasu, H, Ishitani, R, Hori, H, Nureki, O.
Deposit date:2009-02-05
Release date:2009-05-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Atomic structure of a folate/FAD-dependent tRNA T54 methyltransferase
Proc.Natl.Acad.Sci.USA, 106, 2009
4FZ2
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Crystal structure of the fourth type of archaeal tRNA splicing endonuclease from Candidatus Micrarchaeum acidiphilum ARMAN-2
Descriptor: tRNA intron endonuclease
Authors:Hirata, A, Fujishima, K, Yamagami, R, Kawamura, T, Banfiled, J.F, Kanai, A, Hori, H.
Deposit date:2012-07-06
Release date:2012-09-12
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.252 Å)
Cite:X-ray structure of the fourth type of archaeal tRNA splicing endonuclease: insights into the evolution of a novel three-unit composition and a unique loop involved in broad substrate specificity
Nucleic Acids Res., 40, 2012
7EDC
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BU of 7edc by Molmil
Crystal structure of mutant tRNA [Gm18] methyltransferase TrmH (E107G) in complex with S-adenosyl-L-methionine from Escherichia coli
Descriptor: PHOSPHATE ION, S-ADENOSYLMETHIONINE, tRNA (guanosine(18)-2'-O)-methyltransferase
Authors:Kono, Y, Ito, A, Okamoto, A, Yamagami, R, Hirata, A, Hori, H.
Deposit date:2021-03-15
Release date:2022-03-23
Method:X-RAY DIFFRACTION (1.946 Å)
Cite:Unique substrate specificity of type II tRNA Gm18 methyltransferase from Escherichia coli
To Be Published
1UI7
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BU of 1ui7 by Molmil
Site-directed mutagenesis of His433 involved in binding of copper ion in Arthrobacter globiformis amine oxidase
Descriptor: COPPER (II) ION, Phenylethylamine oxidase
Authors:Matsunami, H, Okajima, T, Hirota, S, Yamaguchi, H, Hori, H, Kuroda, S, Tanizawa, K.
Deposit date:2003-07-15
Release date:2004-04-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Chemical rescue of a site-specific mutant of bacterial copper amine oxidase for generation of the topa quinone cofactor
Biochemistry, 43, 2004
1UI8
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BU of 1ui8 by Molmil
Site-directed mutagenesis of His592 involved in binding of copper ion in Arthrobacter globiformis amine oxidase
Descriptor: COPPER (II) ION, Phenylethylamine oxidase
Authors:Matsunami, H, Okajima, T, Hirota, S, Yamaguchi, H, Hori, H, Kuroda, S, Tanizawa, K.
Deposit date:2003-07-15
Release date:2004-04-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Chemical rescue of a site-specific mutant of bacterial copper amine oxidase for generation of the topa quinone cofactor
Biochemistry, 43, 2004
5X89
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The X-ray crystal structure of subunit fusion RNA splicing endonuclease from Methanopyrus kandleri
Descriptor: EndA-like protein,tRNA-splicing endonuclease, PHOSPHATE ION
Authors:Kaneta, A, Fujishima, K, Morikazu, W, Hori, H, Hirata, A.
Deposit date:2017-03-01
Release date:2018-01-24
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:The RNA-splicing endonuclease from the euryarchaeaon Methanopyrus kandleri is a heterotetramer with constrained substrate specificity
Nucleic Acids Res., 46, 2018
6JPL
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BU of 6jpl by Molmil
The X-ray structure of yeast tRNA methyltransferase Trm7-Trm734 in complex with S-adenosyl-L-methionine
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, S-ADENOSYLMETHIONINE, SULFATE ION, ...
Authors:Hirata, A, Okada, K, Yoshii, K, Shiraisi, H, Saijo, S, Yonezawa, K, Shimizu, N, Hori, H.
Deposit date:2019-03-27
Release date:2019-10-02
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Structure of tRNA methyltransferase complex of Trm7 and Trm734 reveals a novel binding interface for tRNA recognition.
Nucleic Acids Res., 47, 2019
6JP6
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The X-ray structure of yeast tRNA methyltransferase complex of Trm7 and Trm734 essential for 2'-O-methylation at the first position of anticodon in specific tRNAs
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, SULFATE ION, tRNA (cytidine(34)/guanosine(34)-2'-O)-methyltransferase, ...
Authors:Hirata, A, Okada, K, Yoshii, K, Shiraisi, H, Saijo, S, Yonezawa, K, Sihimzu, N, Hori, H.
Deposit date:2019-03-26
Release date:2019-10-02
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.699 Å)
Cite:Structure of tRNA methyltransferase complex of Trm7 and Trm734 reveals a novel binding interface for tRNA recognition.
Nucleic Acids Res., 47, 2019
1V2X
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TrmH
Descriptor: PHOSPHATE ION, S-ADENOSYLMETHIONINE, tRNA (Gm18) methyltransferase
Authors:Nureki, O, Watanabe, K, Fukai, S, Ishii, R, Endo, Y, Hori, H, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-10-17
Release date:2004-05-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Deep Knot Structure for Construction of Active Site and Cofactor Binding Site of tRNA Modification Enzyme
STRUCTURE, 12, 2004
1WYG
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BU of 1wyg by Molmil
Crystal Structure of a Rat Xanthine Dehydrogenase Triple Mutant (C535A, C992R and C1324S)
Descriptor: 2-HYDROXYBENZOIC ACID, ACETIC ACID, CALCIUM ION, ...
Authors:Nishino, T, Okamoto, K, Kawaguchi, Y, Hori, H, Matsumura, T, Eger, B.T, Pai, E.F, Nishino, T.
Deposit date:2005-02-14
Release date:2005-05-31
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Mechanism of the Conversion of Xanthine Dehydrogenase to Xanthine Oxidase: IDENTIFICATION OF THE TWO CYSTEINE DISULFIDE BONDS AND CRYSTAL STRUCTURE OF A NON-CONVERTIBLE RAT LIVER XANTHINE DEHYDROGENASE MUTANT
J.Biol.Chem., 280, 2005

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