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5TR8
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BU of 5tr8 by Molmil
Crystal structure of vaccine-elicited pan- influenza H1N1 neutralizing murine antibody 441D6.
分子名称: 441D6 Fab Heavy chain, 441D6 Fab Light chain, NICKEL (II) ION
著者Joyce, M.G, Kanekiyo, M, Mascola, J.R, Graham, B.S, Kwong, P.D.
登録日2016-10-25
公開日2018-05-09
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Mosaic nanoparticle display of diverse influenza virus hemagglutinins elicits broad B cell responses.
Nat.Immunol., 20, 2019
5TRU
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BU of 5tru by Molmil
Structure of the first-in-class checkpoint inhibitor Ipilimumab bound to human CTLA-4
分子名称: Cytotoxic T-lymphocyte protein 4, Ipilimumab Fab heavy chain, Ipilimumab Fab light chain
著者Ramagopal, U.A, Liu, W, Garrett-Thomson, S.C, Yan, Q, Srinivasan, M, Wong, S.C, Bell, A, Mankikar, S, Rangan, V.S, Deshpande, S, Bonanno, J.B, Korman, A.J, Almo, S.C.
登録日2016-10-27
公開日2017-05-10
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural basis for cancer immunotherapy by the first-in-class checkpoint inhibitor ipilimumab.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5MEN
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BU of 5men by Molmil
Human Leukocyte Antigen A02 presenting ILAKFLHWL, in complex with cognate T-Cell Receptor
分子名称: 1,2-ETHANEDIOL, Beta-2-microglobulin, GLYCEROL, ...
著者Rizkallah, P.J, Lloyd, A, Crowther, M, Cole, D.K, Sewell, A.K.
登録日2016-11-16
公開日2016-12-07
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献Structural Mechanism Underpinning Cross-reactivity of a CD8+ T-cell Clone That Recognizes a Peptide Derived from Human Telomerase Reverse Transcriptase.
J. Biol. Chem., 292, 2017
5MJ1
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BU of 5mj1 by Molmil
Extracellular domain of human CD83 - rhombohedral crystal form
分子名称: CD83 antigen, DI(HYDROXYETHYL)ETHER
著者Klingl, S, Egerer-Sieber, C, Schmid, B, Weiler, S, Muller, Y.A.
登録日2016-11-29
公開日2017-03-29
最終更新日2018-03-07
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure of the Extracellular Domain of the Human Dendritic Cell Surface Marker CD83.
J. Mol. Biol., 429, 2017
5MJ2
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BU of 5mj2 by Molmil
Extracellular domain of human CD83 - rhombohedral crystal form after UV-RIP (S-SAD data)
分子名称: CD83 antigen, DI(HYDROXYETHYL)ETHER
著者Klingl, S, Egerer-Sieber, C, Schmid, B, Weiler, S, Muller, Y.A.
登録日2016-11-29
公開日2017-03-29
最終更新日2018-03-07
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Crystal Structure of the Extracellular Domain of the Human Dendritic Cell Surface Marker CD83.
J. Mol. Biol., 429, 2017
5MJ0
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Extracellular domain of human CD83 - cubic crystal form
分子名称: CD83 antigen
著者Klingl, S, Egerer-Sieber, C, Schmid, B, Muller, Y.A.
登録日2016-11-29
公開日2017-03-29
最終更新日2018-03-07
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Crystal Structure of the Extracellular Domain of the Human Dendritic Cell Surface Marker CD83.
J. Mol. Biol., 429, 2017
5MIX
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BU of 5mix by Molmil
Extracellular domain of human CD83 - trigonal crystal form
分子名称: CD83 antigen
著者Klingl, S, Egerer-Sieber, C, Schmid, B, Muller, Y.A.
登録日2016-11-29
公開日2017-03-29
最終更新日2017-09-06
実験手法X-RAY DIFFRACTION (1.701 Å)
主引用文献Crystal Structure of the Extracellular Domain of the Human Dendritic Cell Surface Marker CD83.
J. Mol. Biol., 429, 2017
5WT9
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BU of 5wt9 by Molmil
Complex structure of PD-1 and nivolumab-Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy Chain of Nivolumab, Light Chain of Nivolumab, ...
著者Tan, S, Zhang, H, Chai, Y, Song, H, Tong, Z, Wang, Q, Qi, J, Wong, G, Zhu, X, Liu, W.J, Gao, S, Wang, Z, Shi, Y, Yang, F, Gao, G.F, Yan, J.
登録日2016-12-10
公開日2017-02-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.401 Å)
主引用文献An unexpected N-terminal loop in PD-1 dominates binding by nivolumab.
Nat Commun, 8, 2017
5MP3
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BU of 5mp3 by Molmil
Crystal structure of DC8E8 Fab in the complex with a 30-mer tau peptide at pH 6.5
分子名称: ENSMUSG00000076577 protein, Igh protein, Microtubule-associated protein
著者Skrabana, R, Novak, M, Cehlar, O, Kontsekova, E.
登録日2016-12-15
公開日2018-05-02
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Crystal structure of DC8E8 Fab in the complex with a 30-mer tau peptide at pH 6.5
To be published
5UD8
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BU of 5ud8 by Molmil
Crystal Structure of Mutant Ig-like Domain
分子名称: Triggering receptor expressed on myeloid cells 2
著者Sudom, A, Min, X, Wang, Z.
登録日2016-12-23
公開日2018-04-04
最終更新日2019-04-17
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Molecular basis for the loss-of-function effects of the Alzheimer's disease-associated R47H variant of the immune receptor TREM2.
J. Biol. Chem., 293, 2018
5UD7
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BU of 5ud7 by Molmil
Crystal Structure of Wild-Type Ig-like Domain
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, IODIDE ION, SULFATE ION, ...
著者Sudom, A, Min, X, Wang, Z.
登録日2016-12-23
公開日2018-04-04
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.20002246 Å)
主引用文献Molecular basis for the loss-of-function effects of the Alzheimer's disease-associated R47H variant of the immune receptor TREM2.
J. Biol. Chem., 293, 2018
5UG0
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BU of 5ug0 by Molmil
Human antibody H2897 in complex with influenza hemagglutinin H1 Solomon Islands/03/2006
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2897 heavy chain, ...
著者Raymond, D.D, Caradonna, T, Schmidt, A.G, Harrison, S.C.
登録日2017-01-06
公開日2017-05-31
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献CryoEM Structure of an Influenza Virus Receptor-Binding Site Antibody-Antigen Interface.
J. Mol. Biol., 429, 2017
5MTL
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BU of 5mtl by Molmil
Crystal structure of an amyloidogenic light chain
分子名称: light chain dimer,IGL@ protein,IGL@ protein
著者Oberti, L, Rognoni, P, Russo, R, Bacarizo, J, Bolognesi, M, Ricagno, S.
登録日2017-01-10
公開日2017-12-13
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Concurrent structural and biophysical traits link with immunoglobulin light chains amyloid propensity.
Sci Rep, 7, 2017
5UGY
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BU of 5ugy by Molmil
Influenza hemagglutinin in complex with a neutralizing antibody
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CH65 heavy chain, ...
著者Whittle, J.R.R, Jenni, S, Harrison, S.C.
登録日2017-01-10
公開日2017-01-25
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.801 Å)
主引用文献Broadly neutralizing human antibody that recognizes the receptor-binding pocket of influenza virus hemagglutinin.
Proc. Natl. Acad. Sci. U.S.A., 108, 2011
5UK4
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BU of 5uk4 by Molmil
VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307
分子名称: Anti-vesicular stomatitis virus N VHH, Nucleoprotein, RNA (45-MER)
著者Hanke, L, Knockenhauer, K.E, Ploegh, H.L, Schwartz, T.U.
登録日2017-01-19
公開日2017-04-19
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.204 Å)
主引用文献Vesicular stomatitis virus N protein-specific single-domain antibody fragments inhibit replication.
EMBO Rep., 18, 2017
5UKB
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BU of 5ukb by Molmil
VSV N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1004
分子名称: Anti-vesicular stomatitis virus N VHH, Nucleocapsid, RNA (45-MER)
著者Hanke, L, Knockenhauer, K.E, Ploegh, H.L, Schwartz, T.U.
登録日2017-01-20
公開日2017-04-19
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (5.473 Å)
主引用文献Vesicular stomatitis virus N protein-specific single-domain antibody fragments inhibit replication.
EMBO Rep., 18, 2017
5N2F
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BU of 5n2f by Molmil
Structure of PD-L1/small-molecule inhibitor complex
分子名称: 4-[[4-[[3-(2,3-dihydro-1,4-benzodioxin-6-yl)-2-methyl-phenyl]methoxy]-2,5-bis(fluoranyl)phenyl]methylamino]-3-oxidanylidene-butanoic acid, Programmed cell death 1 ligand 1
著者Guzik, K, Zak, K.M, Grudnik, P, Dubin, G, Holak, T.A.
登録日2017-02-07
公開日2017-06-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Small-Molecule Inhibitors of the Programmed Cell Death-1/Programmed Death-Ligand 1 (PD-1/PD-L1) Interaction via Transiently Induced Protein States and Dimerization of PD-L1.
J. Med. Chem., 60, 2017
5N2D
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BU of 5n2d by Molmil
Structure of PD-L1/small-molecule inhibitor complex
分子名称: Programmed cell death 1 ligand 1, ~{N}-[2-[[2,6-dimethoxy-4-[(2-methyl-3-phenyl-phenyl)methoxy]phenyl]methylamino]ethyl]ethanamide
著者Guzik, K, Zak, K.M, Grudnik, P, Dubin, G, Holak, T.A.
登録日2017-02-07
公開日2017-06-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Small-Molecule Inhibitors of the Programmed Cell Death-1/Programmed Death-Ligand 1 (PD-1/PD-L1) Interaction via Transiently Induced Protein States and Dimerization of PD-L1.
J. Med. Chem., 60, 2017
5UTZ
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BU of 5utz by Molmil
Human IL-2/Fab complex
分子名称: Fab 5111 heavy chain, Fab 5111 light chain, GLYCEROL, ...
著者Jude, K.M, Garcia, K.C.
登録日2017-02-15
公開日2018-07-11
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.747 Å)
主引用文献A human anti-IL-2 antibody that potentiates regulatory T cells by a structure-based mechanism.
Nat. Med., 24, 2018
5X5W
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BU of 5x5w by Molmil
Crystal structure of pseudorabies virus glycoprotein D
分子名称: GD, Nectin-1
著者Li, A, Lu, G, Qi, J, Wu, L, Tian, K, Luo, T, Shi, Y, Yan, J, Gao, G.F.
登録日2017-02-17
公開日2017-04-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of pseudorabies virus glycoprotein D
To Be Published
5N7B
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BU of 5n7b by Molmil
Understanding the singular conformational landscape of the Tn antigens: Sulfur-for- oxygen substitution in the glycosidic linkage provides new insights into molecular recognition by an antibody
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-alpha-D-galactopyranose, APD(CG6)RP(NH2) peptide, ...
著者Companon, I, Martinez-Saez, N, Castro-Lopez, J, Jimenez-Barbero, J, Bernardes, G.J.L, Busto, J.H, Avenoza, A, Jimenez-Oses, G, Hurtado-Guerrero, R, Peregrina, J.M, Corzana, F.
登録日2017-02-20
公開日2018-06-27
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure-Based Design of Potent Tumor-Associated Antigens: Modulation of Peptide Presentation by Single-Atom O/S or O/Se Substitutions at the Glycosidic Linkage.
J.Am.Chem.Soc., 141, 2019
5X8M
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BU of 5x8m by Molmil
PD-L1 in complex with durvalumab
分子名称: Programmed cell death 1 ligand 1, durvalumab heavy chain, durvalumab light chain
著者Heo, Y.S, Lee, H.T.
登録日2017-03-03
公開日2017-08-16
実験手法X-RAY DIFFRACTION (2.661 Å)
主引用文献Molecular mechanism of PD-1/PD-L1 blockade via anti-PD-L1 antibodies atezolizumab and durvalumab
Sci Rep, 7, 2017
5X8L
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PD-L1 in complex with atezolizumab
分子名称: Programmed cell death 1 ligand 1, atezolizumab heavy chain, atezolizumab light chain
著者Heo, Y.S, Lee, H.T.
登録日2017-03-03
公開日2017-08-16
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Molecular mechanism of PD-1/PD-L1 blockade via anti-PD-L1 antibodies atezolizumab and durvalumab
Sci Rep, 7, 2017
5V52
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BU of 5v52 by Molmil
Structure of TIGIT bound to nectin-2 (CD112)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Nectin-2, ...
著者Deuss, F.A, Gully, B.S, Rossjohn, J, Berry, R.
登録日2017-03-13
公開日2017-05-24
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Recognition of nectin-2 by the natural killer cell receptor T cell immunoglobulin and ITIM domain (TIGIT).
J. Biol. Chem., 292, 2017
5XAX
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Parallel homodimer structures of the extracellular domains of the voltage-gated sodium channel beta4 subunit explain its role in cell-cell adhesion
分子名称: GLYCEROL, Sodium channel subunit beta-4
著者Shimizu, H, Yokoyama, S.
登録日2017-03-15
公開日2017-07-05
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.903 Å)
主引用文献Parallel homodimer structures of the extracellular domains of the voltage-gated sodium channel beta 4 subunit explain its role in cell-cell adhesion
J. Biol. Chem., 292, 2017

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