PDB: 97138 件ウェブページステータス検索Chemie searchBIRD

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3QSM	Crystal structure for the MSOX.chloride binary complex 分子名称: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, Monomeric sarcosine oxidase 著者 Kommoju, P, Chen, Z, Bruckner, R.C, Mathews, F.S, Jorns, M.S. 登録日 2011-02-21 公開日 2011-06-01 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Probing oxygen activation sites in two flavoprotein oxidases using chloride as an oxygen surrogate. Biochemistry, 50, 2011
3A1N	Crystal structure of L-Threonine dehydrogenase from Hyperthermophilic Archaeon Thermoplasma volcanium 分子名称: NDP-sugar epimerase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE 著者 Yoneda, K, Sakuraba, H, Ohshima, T. 登録日 2009-04-18 公開日 2010-03-31 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.07 Å) 主引用文献 Crystal Structure of Binary and Ternary Complexes of Archaeal UDP-galactose 4-Epimerase-like L-Threonine Dehydrogenase from Thermoplasma volcanium. J.Biol.Chem., 287, 2012
3KHG	Dpo4 extension ternary complex with misinserted A opposite the 2-aminofluorene-guanine [AF]G lesion 分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, 2-AMINOFLUORENE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ... 著者 Rechkoblit, O, Malinina, L, Patel, D.J. 登録日 2009-10-30 公開日 2010-02-16 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.96 Å) 主引用文献 Mechanism of error-free and semitargeted mutagenic bypass of an aromatic amine lesion by Y-family polymerase Dpo4. Nat.Struct.Mol.Biol., 17, 2010
2WME	Crystallographic structure of betaine aldehyde dehydrogenase from Pseudomonas aeruginosa 分子名称: BETA-MERCAPTOETHANOL, BETAINE ALDEHYDE DEHYDROGENASE, GLYCEROL, ... 著者 Gonzalez-Segura, L, Rudino-Pinera, E, Munoz-Clares, R.A, Horjales, E. 登録日 2009-06-30 公開日 2009-08-04 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 The Crystal Structure of a Ternary Complex of Betaine Aldehyde Dehydrogenase from Pseudomonas Aeruginosa Provides New Insight Into the Reaction Mechanism and Shows a Novel Binding Mode of the 2'- Phosphate of Nadp(+) and a Novel Cation Binding Site. J.Mol.Biol., 385, 2009
1FMO	CRYSTAL STRUCTURE OF A POLYHISTIDINE-TAGGED RECOMBINANT CATALYTIC SUBUNIT OF CAMP-DEPENDENT PROTEIN KINASE COMPLEXED WITH THE PEPTIDE INHIBITOR PKI(5-24) AND ADENOSINE 分子名称: ADENOSINE, CAMP-DEPENDENT PROTEIN KINASE, HEAT STABLE RABBIT SKELETAL MUSCLE INHIBITOR PROTEIN 著者 Narayana, N, Cox, S, Shaltiel, S, Taylor, S.S, Xuong, N.-H. 登録日 1997-07-08 公開日 1998-01-14 最終更新日 2023-08-09 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Crystal structure of a polyhistidine-tagged recombinant catalytic subunit of cAMP-dependent protein kinase complexed with the peptide inhibitor PKI(5-24) and adenosine. Biochemistry, 36, 1997
3KHL	Dpo4 post-extension ternary complex with misinserted A opposite the 2-aminofluorene-guanine [AF]G lesion 分子名称: 2-AMINOFLUORENE, 5'-D(*CP*C*TP*AP*AP*CP*GP*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3', 5'-D(*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*GP*AP*(DDG))-3', ... 著者 Rechkoblit, O, Malinina, L, Patel, D.J. 登録日 2009-10-30 公開日 2010-02-16 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Mechanism of error-free and semitargeted mutagenic bypass of an aromatic amine lesion by Y-family polymerase Dpo4. Nat.Struct.Mol.Biol., 17, 2010
3RVD	Crystal structure of the binary complex, obtained by soaking, of photosyntetic a4 glyceraldehyde 3-phosphate dehydrogenase (gapdh) with cp12-2, both from arabidopsis thaliana. 分子名称: Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ... 著者 Fermani, S, Thumiger, A, Falini, G, Marri, L, Sparla, F, Trost, P. 登録日 2011-05-06 公開日 2012-04-25 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Conformational Selection and Folding-upon-binding of Intrinsically Disordered Protein CP12 Regulate Photosynthetic Enzymes Assembly. J.Biol.Chem., 287, 2012
2AYQ	3-ISOPROPYLMALATE DEHYDROGENASE FROM THE MODERATE FACULTATIVE THERMOPHILE, BACILLUS COAGULANS 分子名称: 3-ISOPROPYLMALATE DEHYDROGENASE 著者 Tsuchiya, D, Takenaka, A. 登録日 1998-02-20 公開日 1998-05-27 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Crystal structure of 3-isopropylmalate dehydrogenase from the moderate facultative thermophile, Bacillus coagulans: two strategies for thermostabilization of protein structures. J.Biochem.(Tokyo), 122, 1997
2AU0	Unmodified preinsertion binary complex 分子名称: 5'-D(*CP*TP*AP*AP*CP*G*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3', 5'-D(*GP*GP*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*(DDG))-3', CALCIUM ION, ... 著者 Rechkoblit, O, Malinina, L, Cheng, Y, Kuryavyi, V, Broyde, S, Geacintov, N.E, Patel, D.J. 登録日 2005-08-26 公開日 2006-01-10 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Stepwise Translocation of Dpo4 Polymerase during Error-Free Bypass of an oxoG Lesion Plos Biol., 4, 2006
1BPX	DNA POLYMERASE BETA/DNA COMPLEX 分子名称: DNA (5'-D(*CP*CP*GP*AP*CP*GP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3'), DNA (5'-D(*GP*TP*CP*GP*G)-3'), ... 著者 Sawaya, M.R, Prasad, R, Wilson, S.H, Kraut, J, Pelletier, H. 登録日 1997-04-11 公開日 1997-06-16 最終更新日 2023-08-02 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal structures of human DNA polymerase beta complexed with gapped and nicked DNA: evidence for an induced fit mechanism. Biochemistry, 36, 1997
7SG5	Structure of PfCSP peptide 21 with antibody CIS43_Var2 分子名称: CIS43_Var2 Fab Heavy chain, CIS43_Var2 Fab Light chain, GLYCEROL, ... 著者 Tripathi, P, Kwong, P.D. 登録日 2021-10-05 公開日 2022-06-22 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Highly protective antimalarial antibodies via precision library generation and yeast display screening. J.Exp.Med., 219, 2022
7SG6	Structure of PfCSP peptide 21 with antibody CIS43_Var10 分子名称: CIS43_Var10 Fab Heavy chain, CIS43_Var10 Fab Light chain, GLYCEROL, ... 著者 Tripathi, P, Kwong, P.D. 登録日 2021-10-05 公開日 2022-06-22 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Highly protective antimalarial antibodies via precision library generation and yeast display screening. J.Exp.Med., 219, 2022
2CPG	TRANSCRIPTIONAL REPRESSOR COPG 分子名称: CHLORIDE ION, TRANSCRIPTIONAL REPRESSOR COPG 著者 Gomis-Rueth, F.X, Sola, M, Acebo, P, Parraga, A, Guasch, A, Eritja, R, Gonzalez, A, Espinosa, M, del Solar, G, Coll, M. 登録日 1999-11-15 公開日 1999-11-19 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 The structure of plasmid-encoded transcriptional repressor CopG unliganded and bound to its operator. EMBO J., 17, 1998
1GZH	Crystal structure of the BRCT domains of human 53BP1 bound to the p53 tumor supressor 分子名称: CELLULAR TUMOR ANTIGEN P53, SULFATE ION, TUMOR SUPPRESSOR P53-BINDING PROTEIN 1, ... 著者 Derbyshire, D.J, Doherty, A.J. 登録日 2002-05-22 公開日 2002-06-27 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Crystal Structure of Human 53BP1 Brct Domains Bound to P53 Tumour Suppressor Embo J., 21, 2002
1SGU	Comparing the Accumulation of Active Site and Non-active Site Mutations in the HIV-1 Protease 分子名称: N-[2(R)-HYDROXY-1(S)-INDANYL]-5-[(2(S)-TERTIARY BUTYLAMINOCARBONYL)-4(3-PYRIDYLMETHYL)PIPERAZINO]-4(S)-HYDROXY-2(R)-PHENYLMETHYLPENTANAMIDE, POL polyprotein 著者 Clemente, J.C, Moose, R.E, Hemrajani, R, Govindasamy, L, Reutzel, R, Mckenna, R, Abandje-McKenna, M, Goodenow, M.M, Dunn, B.M. 登録日 2004-02-24 公開日 2004-10-05 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Comparing the Accumulation of Active- and Nonactive-Site Mutations in the HIV-1 Protease. Biochemistry, 43, 2004
8CQU	Flavin mononucleotide-dependent nitroreductase B.thetaiotaomicron (BT_1680) 分子名称: CITRIC ACID, Putative NADH dehydrogenase/NAD(P)H nitroreductase, TERTIARY-BUTYL ALCOHOL 著者 Blaha, J, Adam, L, Beckham, K.S.H, Chojnowski, G, Wilmanns, M, Zimmermann, M. 登録日 2023-03-07 公開日 2024-03-27 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structural insights into the diversity of nitroreductase enzymes in Bacteroides thetaiotaomicron To Be Published
1GS3	High resolution crystal structure of PI delta-5-3-Ketosteroid Isomerase mutants Y30F/Y55F/Y115F/D38N (Y32F/Y57F/Y119F/D40N, PI numbering)complexed with equilenin at 2.1 A resolution 分子名称: EQUILENIN, STEROID DELTA-ISOMERASE 著者 Shin, S, Ha, N.-C, Oh, B.-H. 登録日 2001-12-27 公開日 2003-01-23 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Contribution of a Low-Barrier Hydrogen Bond to Catalysis by Delta-5-3-Ketosteroid Isomerase is not Extremely High Compared to that of an Ordinary Hydrogen Bond. Low-Barrier Hydrogen Bond of Pi Ksi To be Published
1SDT	Crystal structures of HIV protease V82A and L90M mutants reveal changes in indinavir binding site. 分子名称: CHLORIDE ION, N-[2(R)-HYDROXY-1(S)-INDANYL]-5-[(2(S)-TERTIARY BUTYLAMINOCARBONYL)-4(3-PYRIDYLMETHYL)PIPERAZINO]-4(S)-HYDROXY-2(R)-PHENYLMETHYLPENTANAMIDE, protease RETROPEPSIN 著者 Mahalingam, B, Wang, Y.-F, Boross, P.I, Tozser, J, Louis, J.M, Harrison, R.W, Weber, I.T. 登録日 2004-02-14 公開日 2004-05-25 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 Crystal structures of HIV protease V82A and L90M mutants reveal changes in the indinavir-binding site Eur.J.Biochem., 271, 2004
1SDU	Crystal structures of HIV protease V82A and L90M mutants reveal changes in indinavir binding site. 分子名称: ACETATE ION, N-[2(R)-HYDROXY-1(S)-INDANYL]-5-[(2(S)-TERTIARY BUTYLAMINOCARBONYL)-4(3-PYRIDYLMETHYL)PIPERAZINO]-4(S)-HYDROXY-2(R)-PHENYLMETHYLPENTANAMIDE, SULFATE ION, ... 著者 Mahalingam, B, Wang, Y.-F, Boross, P.I, Tozser, J, Louis, J.M, Harrison, R.W, Weber, I.T. 登録日 2004-02-14 公開日 2004-05-25 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.25 Å) 主引用文献 Crystal structures of HIV protease V82A and L90M mutants reveal changes in the indinavir-binding site Eur.J.Biochem., 271, 2004
1H48	The structure of 2C-Methyl-D-erythritol 2,4-cyclodiphosphate synthase in complex with CMP and product 分子名称: 2C-METHYL-D-ERYTHRITOL 2,4-CYCLODIPHOSPHATE, 2C-METHYL-D-ERYTHRITOL-2,4-CYCLODIPHOSPHATE SYNTHASE, CYTIDINE-5'-MONOPHOSPHATE, ... 著者 Kemp, L.E, Alphey, M.S, Bond, C.S, Hunter, W.N. 登録日 2003-02-24 公開日 2004-12-22 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 The Identification of Isoprenoids that Bind in the Intersubunit Cavity of Escherichia Coli 2C-Methyl-D-Erythritol-2,4-Cyclodiphosphate Synthase by Complementary Biophysical Methods Acta Crystallogr.,Sect.D, 61, 2005
8D49	Structure of Cas12a2 binary complex 分子名称: OrfB_Zn_ribbon domain-containing protein, RNA (26-MER) 著者 Bravo, J.P.K, Taylor, D.W. 登録日 2022-06-01 公開日 2023-01-18 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 RNA targeting unleashes indiscriminate nuclease activity of CRISPR-Cas12a2. Nature, 613, 2023
2D3Q	Crystal Structure of a Decolorizing Peroxidase (DyP) That Catalyses the Biological Oxidation of Anthraquinone Derivatives 分子名称: Decolorizing Peroxidase, PROTOPORPHYRIN IX CONTAINING FE 著者 Sato, T, Sugano, Y, Shoda, M. 登録日 2005-09-30 公開日 2006-09-30 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 The catalytic mechanism of dye-decolorizing peroxidase DyP may require the swinging movement of an aspartic acid residue Febs J., 278, 2011
8D7E	Cryo-EM structure of human CNTFR alpha in complex with the Fab fragments of two antibodies 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Ciliary neurotrophic factor receptor subunit alpha, H4H25311P2 antibody Fab fragment heavy chain, ... 著者 Zhou, Y, Franklin, M.C. 登録日 2022-06-07 公開日 2023-03-29 実験手法 ELECTRON MICROSCOPY (2.93 Å) 主引用文献 Structural insights into the assembly of gp130 family cytokine signaling complexes. Sci Adv, 9, 2023
2SAS	STRUCTURE OF A SARCOPLASMIC CALCIUM-BINDING PROTEIN FROM AMPHIOXUS REFINED AT 2.4 ANGSTROMS RESOLUTION 分子名称: CALCIUM ION, SARCOPLASMIC CALCIUM-BINDING PROTEIN 著者 Cook, W.J, Babu, Y.S, Cox, J.A. 登録日 1993-07-30 公開日 1993-10-31 最終更新日 2019-08-14 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structure of a sarcoplasmic calcium-binding protein from amphioxus refined at 2.4 A resolution. J.Mol.Biol., 229, 1993
7M1Z	Targeting Enterococcus faecalis HMG-CoA reductase with a novel non-statin inhibitor 分子名称: (R)-MEVALONATE, 3-HYDROXY-3-METHYLGLUTARYL-COENZYME A, ACETATE ION, ... 著者 Bose, S, Steussy, C.N, Stauffacher, C.V. 登録日 2021-03-15 公開日 2022-09-21 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.27 Å) 主引用文献 Targeting Enterococcus faecalis HMG-CoA reductase with a non-statin inhibitor Nat Commun, 2023

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