PDB: 41454 件ウェブページステータス検索Chemie searchBIRD

---

4V40	BETA-GALACTOSIDASE 分子名称: BETA-GALACTOSIDASE, MAGNESIUM ION 著者 Jacobson, R.H, Zhang, X, Dubose, R.F, Matthews, B.W. 登録日 1994-07-18 公開日 2014-07-09 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Three-dimensional structure of beta-galactosidase from E. coli. Nature, 369, 1994
6O2O	CDTb Double Heptamer Short Form Modeled from Cryo-EM Map Reconstructed using C1 Symmetry 分子名称: ADP-ribosyltransferase binding component 著者 Lacy, D.B, Sheedlo, M.J, Anderson, D.M. 登録日 2019-02-24 公開日 2019-10-30 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (4.53 Å) 主引用文献 Structural insights into the transition of Clostridioides difficile binary toxin from prepore to pore. Nat Microbiol, 5, 2020
3E3F	H. influenzae beta-carbonic anhydrase, variant V47A with 100 mM bicarbonate 分子名称: BICARBONATE ION, Carbonic anhydrase 2, ZINC ION 著者 Rowlett, R.S, Mysliwiec, M. 登録日 2008-08-07 公開日 2009-08-18 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Evidence for a bicarbonate "escort" site in Haemophilus influenzae beta-carbonic anhydrase . Biochemistry, 49, 2010
6NY5	Crystal structure of the PUM-HD domain of S. pombe Puf1 in complex with RNA 分子名称: MAGNESIUM ION, Pumilio domain-containing protein C56F2.08c, RNA (5'-R(P*UP*UP*AP*AP*UP*AP*AP*CP*UP*UP*AP*AP*U)-3'), ... 著者 Qiu, C, Hall, T.M.T. 登録日 2019-02-11 公開日 2019-07-03 最終更新日 2020-01-15 実験手法 X-RAY DIFFRACTION (3.002 Å) 主引用文献 Distinct RNA-binding modules in a single PUF protein cooperate to determine RNA specificity. Nucleic Acids Res., 47, 2019
5K7H	Crystal structure of AibR in complex with the effector molecule isovaleryl coenzyme A 分子名称: CHLORIDE ION, Isovaleryl-coenzyme A, NICKEL (II) ION, ... 著者 Bock, T, Volz, C, Mueller, R, Blankenfeldt, W. 登録日 2016-05-26 公開日 2016-12-21 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 The AibR-isovaleryl coenzyme A regulator and its DNA binding site - a model for the regulation of alternative de novo isovaleryl coenzyme A biosynthesis in Myxococcus xanthus. Nucleic Acids Res., 45, 2017
8DO5	Crystal structure of NahE in complex with intermediate (R)-4-hydroxy-4-(2-hydroxyphenyl)-2-iminobutanoate 分子名称: (4R)-4-hydroxy-4-(2-hydroxyphenyl)butanoic acid, DIMETHYL SULFOXIDE, Trans-ohydrobenzylidenepyruvate hydratase aldolase 著者 LeVieux, J.A, Hardtke, H.A, Zhang, Y.J. 登録日 2022-07-12 公開日 2022-12-28 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 A mutagenic analysis of NahE, a hydratase-aldolase in the naphthalene degradative pathway. Arch.Biochem.Biophys., 733, 2023
4WF7	Crystal structures of trehalose synthase from Deinococcus radiodurans reveal that a closed conformation is involved in the intramolecular isomerization catalysis 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, MAGNESIUM ION, ... 著者 Wang, Y.L, Chow, S.Y, Lin, Y.T, Hsieh, Y.C, Lee, G.C, Liaw, S.H. 登録日 2014-09-13 公開日 2014-12-24 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.21 Å) 主引用文献 Structures of trehalose synthase from Deinococcus radiodurans reveal that a closed conformation is involved in catalysis of the intramolecular isomerization. Acta Crystallogr.,Sect.D, 70, 2014
8E2R	Crystal structure of TadAC-1.14 分子名称: GLYCEROL, ZINC ION, tRNA-specific adenosine deaminase 1.14 著者 Feliciano, P.R, Lee, S.J, Ciaramella, G. 登録日 2022-08-15 公開日 2023-01-11 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.22 Å) 主引用文献 Improved cytosine base editors generated from TadA variants. Nat.Biotechnol., 41, 2023
8E2P	Crystal structure of TadA*8.20 in a complex with ssDNA 分子名称: DNA (5'-D(P*GP*CP*TP*CP*GP*GP*CP*TP*(D8A)P*CP*GP*GP*A)-3'), ZINC ION, tRNA-specific adenosine deaminase 8.20 著者 Feliciano, P.R, Lee, S.J, Ciaramella, G. 登録日 2022-08-15 公開日 2023-01-11 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.72 Å) 主引用文献 Improved cytosine base editors generated from TadA variants. Nat.Biotechnol., 41, 2023
8DQV	The 1.52 angstrom CryoEM structure of the [NiFe]-hydrogenase Huc from Mycobacterium smegmatis - catalytic dimer (Huc2S2L) 分子名称: CARBONMONOXIDE-(DICYANO) IRON, FE3-S4 CLUSTER, Hydrogenase-2, ... 著者 Grinter, R, Venugopal, H, Kropp, A, Greening, C. 登録日 2022-07-20 公開日 2023-01-04 最終更新日 2023-03-29 実験手法 ELECTRON MICROSCOPY (1.52 Å) 主引用文献 Structural basis for bacterial energy extraction from atmospheric hydrogen. Nature, 615, 2023
8E2S	Crystal structure of TadAC-1.19 分子名称: ZINC ION, tRNA-specific adenosine deaminase 1.19 著者 Feliciano, P.R, Lee, S.J, Ciaramella, G. 登録日 2022-08-15 公開日 2023-01-11 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.95 Å) 主引用文献 Improved cytosine base editors generated from TadA variants. Nat.Biotechnol., 41, 2023
8E2Q	Crystal structure of TadAC-1.17 in a complex with ssDNA 分子名称: DNA (5'-D(P*GP*CP*GP*GP*CP*TP*(D8A)P*CP*GP*GP*A)-3'), GLYCEROL, ZINC ION, ... 著者 Feliciano, P.R, Lee, S.J, Ciaramella, G. 登録日 2022-08-15 公開日 2023-01-11 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.34 Å) 主引用文献 Improved cytosine base editors generated from TadA variants. Nat.Biotechnol., 41, 2023
8E73	Vigna radiata supercomplex I+III2 (full bridge) 分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, CARDIOLIPIN, ... 著者 Maldonado, M, Letts, J.A. 登録日 2022-08-23 公開日 2023-01-11 最終更新日 2023-02-08 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Plant-specific features of respiratory supercomplex I + III 2 from Vigna radiata. Nat.Plants, 9, 2023
6O65	Crystal Structure of Arabidopsis thaliana Spermidine Synthase isoform 1 (AtSPDS1) in complex with decarboxylated S-adenosylmethionine and cyclohexylamine 分子名称: 1,2-ETHANEDIOL, 5'-[(S)-(3-AMINOPROPYL)(METHYL)-LAMBDA~4~-SULFANYL]-5'-DEOXYADENOSINE, CYCLOHEXYLAMMONIUM ION, ... 著者 Sekula, B, Dauter, Z. 登録日 2019-03-05 公開日 2019-06-05 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Spermidine Synthase (SPDS) Undergoes Concerted Structural Rearrangements Upon Ligand Binding - A Case Study of the Two SPDS Isoforms FromArabidopsis thaliana. Front Plant Sci, 10, 2019
8DWT	SPOP W22R Form 2 分子名称: Speckle-type POZ protein 著者 Cuneo, M.J, Mittag, T, O'Flynn, B, Lo, Y.H. 登録日 2022-08-02 公開日 2023-01-18 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (6.2 Å) 主引用文献 Higher-order SPOP assembly reveals a basis for cancer mutant dysregulation. Mol.Cell, 83, 2023
5KGN	1.95A resolution structure of independent phosphoglycerate mutase from C. elegans in complex with a macrocyclic peptide inhibitor (2d) 分子名称: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, CHLORIDE ION, GLYCEROL, ... 著者 Lovell, S, Mehzabeen, N, Battaile, K.P, Yu, H, Dranchak, P, MacArthur, R, Li, Z, Carlow, T, Suga, H, Inglese, J. 登録日 2016-06-13 公開日 2017-04-05 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Macrocycle peptides delineate locked-open inhibition mechanism for microorganism phosphoglycerate mutases. Nat Commun, 8, 2017
8DWV	Full-length wild type SPOP 分子名称: Speckle-type POZ protein 著者 Cuneo, M.J, Mittag, T, O'Flynn, B, Lo, Y.H. 登録日 2022-08-02 公開日 2023-01-18 最終更新日 2023-03-22 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Higher-order SPOP assembly reveals a basis for cancer mutant dysregulation. Mol.Cell, 83, 2023
8DWS	Full-length E47K SPOP 分子名称: Speckle-type POZ protein 著者 Cuneo, M.J, Mittag, T, O'Flynn, B, Lo, Y.H. 登録日 2022-08-02 公開日 2023-01-18 最終更新日 2023-03-22 実験手法 ELECTRON MICROSCOPY (3.73 Å) 主引用文献 Higher-order SPOP assembly reveals a basis for cancer mutant dysregulation. Mol.Cell, 83, 2023
8DWU	SPOP W22R Form 1 分子名称: Speckle-type POZ protein 著者 Cuneo, M.J, Mittag, T, O'Flynn, B. 登録日 2022-08-02 公開日 2023-01-18 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Higher-order SPOP assembly reveals a basis for cancer mutant dysregulation. Mol.Cell, 83, 2023
6OKU	CDTb Double Heptamer Long Form Mask 3 Modeled from Cryo-EM Map Reconstructed using C7 Symmetry 分子名称: ADP-ribosyltransferase binding component 著者 Lacy, D.B, Sheedlo, M.J, Anderson, D.M. 登録日 2019-04-15 公開日 2019-10-30 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Structural insights into the transition of Clostridioides difficile binary toxin from prepore to pore. Nat Microbiol, 5, 2020
5JR7	Crystal structure of an ACRDYS heterodimer [RIa(92-365):C] of PKA 分子名称: ADENOSINE-5'-DIPHOSPHATE, cAMP-dependent protein kinase catalytic subunit alpha, cAMP-dependent protein kinase type I-alpha regulatory subunit 著者 Bruystens, J.G.H, Wu, J, Taylor, S.S. 登録日 2016-05-05 公開日 2017-03-15 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (3.56 Å) 主引用文献 Structure of a PKA RI alpha Recurrent Acrodysostosis Mutant Explains Defective cAMP-Dependent Activation. J. Mol. Biol., 428, 2016
5JXZ	A low magnesium structure of the isochorismate synthase, EntC 分子名称: (3R,4R)-3-[(1-carboxyethenyl)oxy]-4-hydroxycyclohexa-1,5-diene-1-carboxylic acid, (5S,6S)-5-[(1-carboxyethenyl)oxy]-6-hydroxycyclohexa-1,3-diene-1-carboxylic acid, Isochorismate synthase EntC, ... 著者 Meneely, K.M, Sundlov, J.A, Gulick, A.M, Lamb, A.L. 登録日 2016-05-13 公開日 2016-07-20 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.88 Å) 主引用文献 An Open and Shut Case: The Interaction of Magnesium with MST Enzymes. J.Am.Chem.Soc., 138, 2016
5JZD	A re-refinement of the isochorismate synthase EntC 分子名称: (5S,6S)-5-[(1-carboxyethenyl)oxy]-6-hydroxycyclohexa-1,3-diene-1-carboxylic acid, Isochorismate synthase EntC, MAGNESIUM ION 著者 Meneely, K.M, Lamb, A.L. 登録日 2016-05-16 公開日 2016-07-20 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2.303 Å) 主引用文献 An Open and Shut Case: The Interaction of Magnesium with MST Enzymes. J.Am.Chem.Soc., 138, 2016
1TD2	Crystal Structure of the PdxY Protein from Escherichia coli 分子名称: 3-HYDROXY-5-(HYDROXYMETHYL)-2-METHYLISONICOTINALDEHYDE, Pyridoxamine kinase, SULFATE ION 著者 Safo, M.K, Musayev, F.N, Hunt, S, di Salvo, M, Scarsdale, N, Schirch, V. 登録日 2004-05-21 公開日 2004-07-13 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.22 Å) 主引用文献 Crystal structure of the PdxY Protein from Escherichia coli J.Bacteriol., 186, 2004
6ON5	Crystal Structure of the Zn-bound Domain-Swapped Dimer Q108K:T51D:A28C:L36C:F57H Mutant of Human Cellular Retinol Binding Protein II 分子名称: Retinol-binding protein 2, ZINC ION 著者 Ghanbarpour, A, Geiger, J. 登録日 2019-04-20 公開日 2019-10-16 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.638 Å) 主引用文献 Engineering the hCRBPII Domain-Swapped Dimer into a New Class of Protein Switches. J.Am.Chem.Soc., 141, 2019

<326327328329330331332333334335336337338339340341>