Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6QVM
DownloadVisualize
BU of 6qvm by Molmil
Undecaheme cytochrome from S-layer of Carboxydothermus ferrireducens
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose, 2-acetamido-2-deoxy-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose, ...
著者Osipov, E.M, Dergousova, N.I, Boyko, K.M, Tikhonova, T.V, Gavrilov, S.F, Popov, V.O.
登録日2019-03-04
公開日2020-03-25
最終更新日2023-02-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Extracellular Fe(III) reductase structure reveals a modular organization enabling S-layer insertion and electron transfer to insoluble substrates
Structure, 2023
7C6H
DownloadVisualize
BU of 7c6h by Molmil
Crystal structure of beta-glycosides-binding protein (W177X) of ABC transporter in an open-liganded state bound to laminaribiose
分子名称: 1,2-ETHANEDIOL, ACETATE ION, CHLORIDE ION, ...
著者Kanaujia, S.P, Chandravanshi, M, Samanta, R.
登録日2020-05-21
公開日2020-10-21
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Conformational Trapping of a beta-Glucosides-Binding Protein Unveils the Selective Two-Step Ligand-Binding Mechanism of ABC Importers.
J.Mol.Biol., 432, 2020
7C6Z
DownloadVisualize
BU of 7c6z by Molmil
Crystal structure of beta-glycosides-binding protein (W67A) of ABC transporter in an open state
分子名称: 1,2-ETHANEDIOL, CARBON DIOXIDE, CHLORIDE ION, ...
著者Kanaujia, S.P, Chandravanshi, M, Samanta, R.
登録日2020-05-22
公開日2020-09-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Conformational Trapping of a beta-Glucosides-Binding Protein Unveils the Selective Two-Step Ligand-Binding Mechanism of ABC Importers.
J.Mol.Biol., 432, 2020
7C6N
DownloadVisualize
BU of 7c6n by Molmil
Crystal structure of beta-glycosides-binding protein (W177X) of ABC transporter in a closed state bound to cellotetraose (Form II)
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, SULFITE ION, ...
著者Kanaujia, S.P, Chandravanshi, M, Samanta, R.
登録日2020-05-21
公開日2020-09-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Conformational Trapping of a beta-Glucosides-Binding Protein Unveils the Selective Two-Step Ligand-Binding Mechanism of ABC Importers.
J.Mol.Biol., 432, 2020
6QPJ
DownloadVisualize
BU of 6qpj by Molmil
Human CLOCK PAS-A domain
分子名称: Circadian locomoter output cycles protein kaput
著者Kwon, H, Freeman, S.L, Moody, P.C.E, Raven, E.L, Basran, J.
登録日2019-02-14
公開日2019-09-25
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.315 Å)
主引用文献Heme binding to human CLOCK affects interactions with the E-box.
Proc.Natl.Acad.Sci.USA, 116, 2019
6QQL
DownloadVisualize
BU of 6qql by Molmil
Crystal structure of Porphyromonas gingivalis glutaminyl cyclase
分子名称: Glutamine cyclotransferase, ZINC ION
著者Linnert, M, Piechotta, A, Parthier, C, Taudte, N, Kolenko, P, Rahfeld, J, Potempa, J, Stubbs, M.T.
登録日2019-02-18
公開日2019-03-06
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.814 Å)
主引用文献Mammalian-like type II glutaminyl cyclases in Porphyromonas gingivalis and other oral pathogenic bacteria as targets for treatment of periodontitis.
J.Biol.Chem., 296, 2021
7C6R
DownloadVisualize
BU of 7c6r by Molmil
Crystal structure of beta-glycosides-binding protein (W177X) of ABC transporter in a closed state bound to cellopentaose
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, SULFATE ION, ...
著者Kanaujia, S.P, Chandravanshi, M, Samanta, R.
登録日2020-05-22
公開日2020-09-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Conformational Trapping of a beta-Glucosides-Binding Protein Unveils the Selective Two-Step Ligand-Binding Mechanism of ABC Importers.
J.Mol.Biol., 432, 2020
7C68
DownloadVisualize
BU of 7c68 by Molmil
Crystal structure of beta-glycosides-binding protein of ABC transporter in a closed state bound to cellotetraose
分子名称: 1,2-ETHANEDIOL, CARBON DIOXIDE, CHLORIDE ION, ...
著者Kanaujia, S.P, Chandravanshi, M, Samanta, R.
登録日2020-05-21
公開日2020-09-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Conformational Trapping of a beta-Glucosides-Binding Protein Unveils the Selective Two-Step Ligand-Binding Mechanism of ABC Importers.
J.Mol.Biol., 432, 2020
7C69
DownloadVisualize
BU of 7c69 by Molmil
Crystal structure of beta-glycosides-binding protein of ABC transporter in a closed state bound to sophorose
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Sugar ABC transporter, ...
著者Kanaujia, S.P, Chandravanshi, M, Samanta, R.
登録日2020-05-21
公開日2020-09-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Conformational Trapping of a beta-Glucosides-Binding Protein Unveils the Selective Two-Step Ligand-Binding Mechanism of ABC Importers.
J.Mol.Biol., 432, 2020
7C6V
DownloadVisualize
BU of 7c6v by Molmil
Crystal structure of beta-glycosides-binding protein (W177X) of ABC transporter in a closed state bound to laminaritriose (Form II)
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Kanaujia, S.P, Chandravanshi, M, Samanta, R.
登録日2020-05-22
公開日2020-09-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Conformational Trapping of a beta-Glucosides-Binding Protein Unveils the Selective Two-Step Ligand-Binding Mechanism of ABC Importers.
J.Mol.Biol., 432, 2020
2BZS
DownloadVisualize
BU of 2bzs by Molmil
Binding of anti-cancer prodrug CB1954 to the activating enzyme NQO2 revealed by the crystal structure of their complex.
分子名称: 5-(AZIRIDIN-1-YL)-2,4-DINITROBENZAMIDE, FLAVIN-ADENINE DINUCLEOTIDE, NRH DEHYDROGENASE [QUINONE] 2, ...
著者Abu Khader, M.M, Heap, J.T, De Matteis, C, Kellam, B, Doughty, S.W, Minton, N, Paoli, M.
登録日2005-08-22
公開日2005-09-23
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Binding of the Anticancer Prodrug Cb1954 to the Activating Enzyme Nqo2 Revealed by the Crystal Structure of Their Complex.
J.Med.Chem., 48, 2005
2B90
DownloadVisualize
BU of 2b90 by Molmil
Crystal structure of the interleukin-4 variant T13DR85A
分子名称: Interleukin-4, SULFATE ION
著者Kraich, M, Klein, M, Patino, E, Harrer, H, Sebald, W, Mueller, T.D.
登録日2005-10-10
公開日2006-05-30
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A modular interface of IL-4 allows for scalable affinity without affecting specificity for the IL-4 receptor
Bmc Biol., 4, 2006
2B91
DownloadVisualize
BU of 2b91 by Molmil
Crystal structure of the interleukin-4 variant F82DR85A
分子名称: Interleukin-4, SULFATE ION
著者Kraich, M, Klein, M, Patino, E, Harrer, H, Sebald, W, Mueller, T.D.
登録日2005-10-10
公開日2006-05-30
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A modular interface of IL-4 allows for scalable affinity without affecting specificity for the IL-4 receptor
Bmc Biol., 4, 2006
2B8Z
DownloadVisualize
BU of 2b8z by Molmil
Crystal structure of the interleukin-4 variant R85A
分子名称: Interleukin-4, SULFATE ION
著者Kraich, M, Klein, M, Patino, E, Harrer, H, Sebald, W, Mueller, T.D.
登録日2005-10-10
公開日2006-05-30
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A modular interface of IL-4 allows for scalable affinity without affecting specificity for the IL-4 receptor
Bmc Biol., 4, 2006
2FBN
DownloadVisualize
BU of 2fbn by Molmil
Plasmodium falciparum putative FK506-binding protein PFL2275c, C-terminal TPR-containing domain
分子名称: 70 kDa peptidylprolyl isomerase, putative
著者Dong, A, Lew, J, Koeieradzki, I, Sundararajan, E, Melone, M, Wasney, G, Zhao, Y, Edwards, A.M, Arrowsmith, C.H, Weigelt, J, Sundstrom, M, Bochkarev, A, Hui, R, Hills, T, Structural Genomics Consortium (SGC)
登録日2005-12-09
公開日2006-01-24
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Crystallographic structure of the tetratricopeptide repeat domain of Plasmodium falciparum FKBP35 and its molecular interaction with Hsp90 C-terminal pentapeptide.
Protein Sci., 18, 2009
2GC3
DownloadVisualize
BU of 2gc3 by Molmil
The crystal structure of phosphoglucose isomerase from Pyrococcus furiosus in complex with mannose 6-phosphate and zinc
分子名称: 6-O-phosphono-alpha-D-mannopyranose, Glucose-6-phosphate isomerase, ZINC ION
著者Berrisford, J.M, Rice, D.W, Baker, P.J.
登録日2006-03-13
公開日2006-04-11
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Evidence Supporting a cis-enediol-based Mechanism for Pyrococcus furiosus Phosphoglucose Isomerase
J.Mol.Biol., 358, 2006
9F8X
DownloadVisualize
BU of 9f8x by Molmil
Low-dose structure of Marinobacter nauticus nitrous oxide reductase
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
著者Einsle, O, Pomowski, A.
登録日2024-05-07
公開日2024-06-19
実験手法X-RAY DIFFRACTION (1.498 Å)
主引用文献Revisiting the metal sites of nitrous oxide reductase in a low-dose structure from Marinobacter nauticus.
J.Biol.Inorg.Chem., 29, 2024
8YTE
DownloadVisualize
BU of 8yte by Molmil
Crystal Structure of TrkA D5 domain in complex with macrocyclic peptide
分子名称: 1,2-ETHANEDIOL, AMINOMETHYLAMIDE, High affinity nerve growth factor receptor, ...
著者Yamada, T, Mihara, K, Ueda, T, Yamauchi, D, Shimizu, M, Ando, A, Mayumi, K, Nakata, Z, Mikamiyama, H.
登録日2024-03-25
公開日2024-07-10
最終更新日2024-07-24
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Discovery and Hit to Lead Optimization of Macrocyclic Peptides as Novel Tropomyosin Receptor Kinase A Antagonists.
J.Med.Chem., 67, 2024
5W4I
DownloadVisualize
BU of 5w4i by Molmil
X-ray crystallographic structure of a beta-hairpin peptide mimic derived from Abeta 16-36. Rigaku data set. (ORN)KLV(MEA)FAE(ORN)AIIGLMV.
分子名称: A-beta 17_36: ORN-LYS-LEU-VAL-MEA-PHE-ALA-GLU-ORN-ALA-ILE-ILE-GLY-LEU-MET-VAL, CHLORIDE ION, IODIDE ION
著者Kreutzer, A.G, McKnelly, K.J, Nowick, J.S.
登録日2017-06-11
公開日2017-11-22
最終更新日2020-01-01
実験手法X-RAY DIFFRACTION (2.026 Å)
主引用文献A Hexamer of a Peptide Derived from A beta 16-36.
Biochemistry, 56, 2017
5W4J
DownloadVisualize
BU of 5w4j by Molmil
X-ray crystallographic structure of a beta-hairpin peptide mimic. (ORN)KLV(MEA)FAE(ORN)AIIGLMV.
分子名称: A-beta 17_36 peptide: ORN-LYS-VAL-PHE-MEA-ALA-ALA-ASP-ORN-ALA-ILE-ILE-GLY-LEU-MET-VAL
著者Kreutzer, A.G, Nowick, J.S.
登録日2017-06-11
公開日2017-11-22
最終更新日2020-01-01
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献A Hexamer of a Peptide Derived from A beta 16-36.
Biochemistry, 56, 2017
8YTD
DownloadVisualize
BU of 8ytd by Molmil
Crystal Structure of TrkA D5 domain in complex with two different macrocyclic peptides
分子名称: 1,2-ETHANEDIOL, High affinity nerve growth factor receptor, Macrocyclic Peptide
著者Yamada, T, Mihara, K, Ueda, T, Yamauchi, D, Shimizu, M, Ando, A, Mayumi, K, Nakata, Z, Mikamiyama, H.
登録日2024-03-25
公開日2024-07-10
最終更新日2024-07-24
実験手法X-RAY DIFFRACTION (2.34 Å)
主引用文献Discovery and Hit to Lead Optimization of Macrocyclic Peptides as Novel Tropomyosin Receptor Kinase A Antagonists.
J.Med.Chem., 67, 2024
5W7Y
DownloadVisualize
BU of 5w7y by Molmil
Crystal Structure of FHA domain of human APLF in complex with XRCC1 monophosphorylated mutated peptide
分子名称: Aprataxin and PNK-like factor, DNA repair protein XRCC1
著者Pedersen, L.C, Kim, K, London, R.E.
登録日2017-06-21
公開日2018-05-02
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Characterization of the APLF FHA-XRCC1 phosphopeptide interaction and its structural and functional implications.
Nucleic Acids Res., 45, 2017
5WLE
DownloadVisualize
BU of 5wle by Molmil
Crystal structure of the PPS PHD finger in complex with H3K4me3
分子名称: H3K4me3 Peptide, Protein partner of snf, isoform A, ...
著者Klein, B.J, Kutateladze, T.G.
登録日2017-07-26
公開日2017-10-04
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.952 Å)
主引用文献A Unique pH-Dependent Recognition of Methylated Histone H3K4 by PPS and DIDO.
Structure, 25, 2017
5WN0
DownloadVisualize
BU of 5wn0 by Molmil
APE1 exonuclease substrate complex with a C/G match
分子名称: DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3'), DNA (5'-D(*GP*GP*AP*TP*CP*CP*GP*TP*CP*GP*AP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(P*TP*CP*GP*AP*CP*GP*GP*AP*TP*CP*C)-3'), ...
著者Freudenthal, B.D, Whitaker, A.M.
登録日2017-07-31
公開日2018-02-28
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Molecular snapshots of APE1 proofreading mismatches and removing DNA damage.
Nat Commun, 9, 2018
8H6R
DownloadVisualize
BU of 8h6r by Molmil
LW Domain of Arabidopsis thaliana TFIIS
分子名称: Transcription elongation factor TFIIS
著者Wang, Y.
登録日2022-10-18
公開日2022-11-23
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献LW Domain of Arabidopsis thaliana TFIIS
To Be Published

223790

件を2024-08-14に公開中

PDB statisticsPDBj update infoContact PDBjnumon