Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5VKL
DownloadVisualize
BU of 5vkl by Molmil
SPT6 tSH2-RPB1 1476-1500 pS1493
分子名称: DNA-directed RNA polymerase II subunit RPB1, Transcription elongation factor SPT6
著者Sdano, M.A, Whitby, F.G, Hill, C.P.
登録日2017-04-21
公開日2017-10-25
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.198 Å)
主引用文献A novel SH2 recognition mechanism recruits Spt6 to the doubly phosphorylated RNA polymerase II linker at sites of transcription.
Elife, 6, 2017
4OMM
DownloadVisualize
BU of 4omm by Molmil
Crystal structure of the intertwined dimer of the c-Src tyrosine kinase SH3 domain mutant N113S
分子名称: DI(HYDROXYETHYL)ETHER, GLYCEROL, Proto-oncogene tyrosine-protein kinase Src, ...
著者Camara-Artigas, A, Bacarizo, J.
登録日2014-01-27
公開日2015-01-28
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The role of Gutamine 128 of the SH3 domain of the c-Src tyrosine kinase in 3D domain swapping and amyloid formation
To be Published
5YV7
DownloadVisualize
BU of 5yv7 by Molmil
Racemic X-ray Structure of Calcicludine
分子名称: Kunitz-type serine protease inhibitor homolog calcicludine
著者Shuai, G, Qian, Q, Lei, L.
登録日2017-11-24
公開日2017-12-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.395 Å)
主引用文献Racemic X-ray Structure of Calcicludine
To Be Published
5YVB
DownloadVisualize
BU of 5yvb by Molmil
Structure of CaMKK2 in complex with CKI-011
分子名称: (3Z)-5-chloro-3-[(1-methyl-1H-pyrazol-4-yl)methylidene]-1,3-dihydro-2H-indol-2-one, CHLORIDE ION, Calcium/calmodulin-dependent protein kinase kinase 2, ...
著者Niwa, H, Handa, N, Yokoyama, S.
登録日2017-11-24
公開日2018-12-05
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Protein ligand interaction analysis against new CaMKK2 inhibitors by use of X-ray crystallography and the fragment molecular orbital (FMO) method.
J.Mol.Graph.Model., 99, 2020
8FYR
DownloadVisualize
BU of 8fyr by Molmil
MicroED structure of Proteinase K from oxygen milled lamellae
分子名称: CALCIUM ION, NITRATE ION, Proteinase K
著者Martynowycz, M.W, Shiriaeva, A, Clabbers, M.T.B, Nicolas, W.J, Weaver, S.J, Hattne, J, Gonen, T.
登録日2023-01-26
公開日2023-03-08
実験手法ELECTRON CRYSTALLOGRAPHY (1.5 Å)
主引用文献A robust approach for MicroED sample preparation of lipidic cubic phase embedded membrane protein crystals.
Nat Commun, 14, 2023
8FYQ
DownloadVisualize
BU of 8fyq by Molmil
MicroED structure of Proteinase K from argon milled lamellae
分子名称: CALCIUM ION, NITRATE ION, Proteinase K
著者Martynowycz, M.W, Shiriaeva, A, Clabbers, M.T.B, Nicolas, W.J, Weaver, S.J, Hattne, J, Gonen, T.
登録日2023-01-26
公開日2023-03-08
実験手法ELECTRON CRYSTALLOGRAPHY (1.4 Å)
主引用文献A robust approach for MicroED sample preparation of lipidic cubic phase embedded membrane protein crystals.
Nat Commun, 14, 2023
6JXQ
DownloadVisualize
BU of 6jxq by Molmil
Room temperature structure of lysozyme delivered in polyacrylamide by serial millisecond crystallography
分子名称: CHLORIDE ION, Lysozyme C
著者Nam, K.H.
登録日2019-04-24
公開日2019-05-15
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Sample delivery using viscous media, a syringe and a syringe pump for serial crystallography.
J.Synchrotron Radiat., 26, 2019
8FYP
DownloadVisualize
BU of 8fyp by Molmil
MicroED structure of Proteinase K from xenon milled lamellae
分子名称: CALCIUM ION, NITRATE ION, Proteinase K
著者Martynowycz, M.W, Shiriaeva, A, Clabbers, M.T.B, Nicolas, W.J, Weaver, S.J, Hattne, J, Gonen, T.
登録日2023-01-26
公開日2023-03-08
実験手法ELECTRON CRYSTALLOGRAPHY (1.45 Å)
主引用文献A robust approach for MicroED sample preparation of lipidic cubic phase embedded membrane protein crystals.
Nat Commun, 14, 2023
5W22
DownloadVisualize
BU of 5w22 by Molmil
Crystal structure of human WT-KRAS in complex with GDP
分子名称: GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
著者Xu, S, Long, B, Boris, G, Ni, S, Kennedy, M.A.
登録日2017-06-05
公開日2017-12-06
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.762 Å)
主引用文献Structural insight into the rearrangement of the switch I region in GTP-bound G12A K-Ras.
Acta Crystallogr D Struct Biol, 73, 2017
8FYS
DownloadVisualize
BU of 8fys by Molmil
MicroED structure of Proteinase K from nitrogen milled lamellae
分子名称: CALCIUM ION, Proteinase K
著者Martynowycz, M.W, Shiriaeva, A, Clabbers, M.T.B, Nicolas, W.J, Weaver, S.J, Hattne, J, Gonen, T.
登録日2023-01-26
公開日2023-03-08
実験手法ELECTRON CRYSTALLOGRAPHY (1.8 Å)
主引用文献A robust approach for MicroED sample preparation of lipidic cubic phase embedded membrane protein crystals.
Nat Commun, 14, 2023
6DMG
DownloadVisualize
BU of 6dmg by Molmil
A multiconformer ligand model of EK6 bound to ERK2
分子名称: 1,2-ETHANEDIOL, Mitogen-activated protein kinase 1, SULFATE ION, ...
著者Hudson, B.M, van Zundert, G.C.P, Keedy, D.A, Fonseca, R, Heliou, A, Suresh, P, Borrelli, K, Day, T, Fraser, J.S, van den Bedem, H.
登録日2018-06-05
公開日2018-12-19
最終更新日2019-04-24
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献qFit-ligand Reveals Widespread Conformational Heterogeneity of Drug-Like Molecules in X-Ray Electron Density Maps.
J. Med. Chem., 61, 2018
7CRZ
DownloadVisualize
BU of 7crz by Molmil
Crystal structure of human glucose transporter GLUT3 bound with C3361
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2S,3R,4S,5R,6R)-6-(hydroxymethyl)-4-undec-10-enoxy-oxane-2,3,5-triol, Solute carrier family 2, ...
著者Yuan, Y.Y, Zhang, S, Wang, N, Jiang, X, Yan, N.
登録日2020-08-14
公開日2021-01-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Orthosteric-allosteric dual inhibitors of PfHT1 as selective antimalarial agents.
Proc.Natl.Acad.Sci.USA, 118, 2021
5W2Y
DownloadVisualize
BU of 5w2y by Molmil
INFLUENZA VIRUS NEURAMINIDASE N9 IN COMPLEX WITH 9-DEOXYGENATED 2,3-DIFLUORO-N-ACETYLNEURAMINIC ACID
分子名称: (2R,3R,4R,5R,6R)-5-acetamido-6-[(1R,2R)-1,2-bis(oxidanyl)propyl]-2,3-bis(fluoranyl)-4-oxidanyl-oxane-2-carboxylic acid, (2~{R},3~{R},4~{R},5~{R})-3-acetamido-2-[(1~{R},2~{R})-1,2-bis(oxidanyl)propyl]-5-fluoranyl-4-oxidanyl-2,3,4,5-tetrahydropyran-1-ium-6-carboxylic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Streltsov, V.A, Mckimm-Breschkin, J, Barrett, S, Pilling, P, Hader, S, Watt, A.G.
登録日2017-06-07
公開日2018-02-21
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Structural and Functional Analysis of Anti-Influenza Activity of 4-, 7-, 8- and 9-Deoxygenated 2,3-Difluoro- N-acetylneuraminic Acid Derivatives.
J. Med. Chem., 61, 2018
5Z2S
DownloadVisualize
BU of 5z2s by Molmil
Crystal structure of DUX4-HD2 domain
分子名称: Double homeobox protein 4
著者Dong, X, Zhang, W, Wu, H, Huang, J, Zhang, M, Wang, P, Zhang, H, Chen, Z, Chen, S, Meng, G.
登録日2018-01-03
公開日2018-04-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural basis of DUX4/IGH-driven transactivation.
Leukemia, 32, 2018
4PK4
DownloadVisualize
BU of 4pk4 by Molmil
Myosin VI motor domain in the PPS state - from a Pi release state crystal, space group P212121 after long soaking with PO4
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ...
著者Isabet, T, Benisty, H, Llinas, P, Sweeney, H.L, Houdusse, A.
登録日2014-05-13
公開日2015-04-29
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.78 Å)
主引用文献How actin initiates the motor activity of Myosin.
Dev.Cell, 33, 2015
6JZI
DownloadVisualize
BU of 6jzi by Molmil
Structure of hen egg-white lysozyme obtained from SFX experiments under atmospheric pressure
分子名称: CHLORIDE ION, Lysozyme C, SODIUM ION
著者Nango, E, Sugahara, M, Nakane, T, Tanaka, T, Iwata, S.
登録日2019-05-02
公開日2019-10-30
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献High-viscosity sample-injection device for serial femtosecond crystallography at atmospheric pressure.
J.Appl.Crystallogr., 52, 2019
7CVJ
DownloadVisualize
BU of 7cvj by Molmil
Crystal structure of lysozyme by fixed-target serial synchrotron crystallography (100 ms)
分子名称: CHLORIDE ION, Lysozyme C, SODIUM ION
著者Nam, K.H.
登録日2020-08-26
公開日2020-09-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Fixed-Target Serial Synchrotron Crystallography Using Nylon Mesh and Enclosed Film-Based Sample Holder
Crystals, 10, 2020
5ZFZ
DownloadVisualize
BU of 5zfz by Molmil
Crystal structure of human DUX4 homeodomains bound to A12T DNA mutant
分子名称: DNA (5'-D(*CP*CP*AP*CP*TP*AP*AP*CP*CP*TP*AP*TP*TP*CP*AP*CP*AP*CP*C)-3'), DNA (5'-D(*GP*GP*TP*GP*TP*GP*AP*AP*TP*AP*GP*GP*TP*TP*AP*GP*TP*GP*G)-3'), Double homeobox protein 4-like protein 4
著者Li, Y.Y, Wu, B.X, Gan, J.H.
登録日2018-03-07
公開日2018-10-31
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis for multiple gene regulation by human DUX4.
Biochem. Biophys. Res. Commun., 505, 2018
7M2F
DownloadVisualize
BU of 7m2f by Molmil
CDK2 with compound 14 inhibitor with carboxylate
分子名称: Cyclin-dependent kinase 2, [(1r,4r)-4-{4-[4-(5-fluoro-2-methoxyphenyl)-1H-pyrrolo[2,3-b]pyridin-2-yl]-3,6-dihydropyridin-1(2H)-yl}cyclohexyl]acetic acid
著者Longenecker, K.L, Qiu, W, Korepanova, A, Tong, Y.
登録日2021-03-16
公開日2021-07-07
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.632 Å)
主引用文献Balancing Properties with Carboxylates: A Lead Optimization Campaign for Selective and Orally Active CDK9 Inhibitors.
Acs Med.Chem.Lett., 12, 2021
4PDC
DownloadVisualize
BU of 4pdc by Molmil
Crystal structure of Cowpox virus CPXV018 (OMCP) bound to human NKG2D
分子名称: CPXV018 protein, NKG2-D type II integral membrane protein
著者Lazear, E, Nelson, C.A, Fremont, D.H, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2014-04-17
公開日2014-05-21
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.991 Å)
主引用文献Structural basis of cowpox evasion of NKG2D immunosurveillance
Biorxiv, 2019
7CVL
DownloadVisualize
BU of 7cvl by Molmil
Crystal structure of lysozyme by fixed-target serial synchrotron crystallography (500 ms)
分子名称: CHLORIDE ION, Lysozyme C, SODIUM ION
著者Nam, K.H.
登録日2020-08-26
公開日2020-09-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Fixed-Target Serial Synchrotron Crystallography Using Nylon Mesh and Enclosed Film-Based Sample Holder
Crystals, 10, 2020
6DV5
DownloadVisualize
BU of 6dv5 by Molmil
Oligomeric complex of a Hsp27 24-mer at 3.6 A resolution
分子名称: Heat shock protein beta-1
著者Aguda, A.H, Brayer, G.D.
登録日2018-06-22
公開日2019-06-26
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.58 Å)
主引用文献Structure-Guided Discovery of Ivermectin as an Inhibitor of Heat Shock Protein-27 Phosphorylation and Depolymerization.
To Be Published
5Z9J
DownloadVisualize
BU of 5z9j by Molmil
Identification of the functions of unusual cytochrome p450-like monooxygenases involved in microbial secondary metablism
分子名称: PROTOPORPHYRIN IX CONTAINING FE, Putative P450-like enzyme, TRIS(HYDROXYETHYL)AMINOMETHANE
著者Lu, M, Lin, L, Zhang, C, Chen, Y.
登録日2018-02-03
公開日2019-02-06
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Riboflavin Is Directly Involved in the N-Dealkylation Catalyzed by Bacterial Cytochrome P450 Monooxygenases.
Chembiochem, 2020
5ZIQ
DownloadVisualize
BU of 5ziq by Molmil
Crystal structure of hexacoordinated heme protein from anhydrobiotic tardigrade at pH 4
分子名称: 1,2-ETHANEDIOL, Globin protein, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Kim, J, Fukuda, Y, Inoue, T.
登録日2018-03-16
公開日2019-01-02
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of Kumaglobin: a hexacoordinated heme protein from an anhydrobiotic tardigrade, Ramazzottius varieornatus.
FEBS J., 286, 2019
4P6Q
DownloadVisualize
BU of 4p6q by Molmil
The crystal structure of the Split End protein SHARP adds a new layer of complexity to proteins containing RNA Recognition Motifs
分子名称: Msx2-interacting protein, SULFATE ION
著者Arieti, F, Gabus, C, Tambalo, M, Huet, T, Round, A, Thore, S.
登録日2014-03-25
公開日2014-05-14
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The crystal structure of the Split End protein SHARP adds a new layer of complexity to proteins containing RNA recognition motifs.
Nucleic Acids Res., 42, 2014

223532

件を2024-08-07に公開中

PDB statisticsPDBj update infoContact PDBjnumon