PDB: 5373 件ウェブページステータス検索Chemie searchBIRD

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1FJE	SOLUTION STRUCTURE OF NUCLEOLIN RBD12 IN COMPLEX WITH SNRE RNA 分子名称: NUCLEOLIN RBD12, SNRE RNA 著者 Allain, F.H.T, Bouvet, P, Dieckmann, T, Feigon, J. 登録日 2000-08-08 公開日 2001-01-03 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Molecular basis of sequence-specific recognition of pre-ribosomal RNA by nucleolin. EMBO J., 19, 2000
1FJ7	SOLUTION STRUCTURE OF NUCLEOLIN RBD1 分子名称: NUCLEOLIN RBD1 著者 Allain, F.H.-T, Gilbert, D.E, Bouvet, P, Feigon, J. 登録日 2000-08-07 公開日 2000-10-16 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Solution structure of the two N-terminal RNA-binding domains of nucleolin and NMR study of the interaction with its RNA target. J.Mol.Biol., 303, 2000
6DF5	Kaiso (ZBTB33) zinc finger DNA binding domain in complex with the specific Kaiso binding sequence (KBS) 分子名称: CHLORIDE ION, DNA (5'-D(*CP*GP*TP*TP*AP*TP*TP*GP*GP*CP*AP*GP*GP*AP*AP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*TP*TP*CP*CP*TP*GP*CP*CP*AP*AP*TP*AP*AP*CP*G)-3'), ... 著者 Nikolova, E.N, Stanfield, R.L, Dyson, H.J, Wright, P.E. 登録日 2018-05-14 公開日 2019-05-22 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.819 Å) 主引用文献 A conformational switch in the zinc finger protein Kaiso mediates differential readout of specific and methylated DNA sequences. Biochemistry, 2020
6DFB	Kaiso (ZBTB33) K539A zinc finger DNA binding domain in complex with the specific Kaiso binding sequence (KBS) 分子名称: CHLORIDE ION, DNA (5'-D(*CP*GP*TP*TP*AP*TP*TP*GP*GP*CP*AP*GP*GP*AP*AP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*TP*TP*CP*CP*TP*GP*CP*CP*AP*AP*TP*AP*AP*CP*G)-3'), ... 著者 Nikolova, E.N, Stanfield, R.L, Dyson, H.J, Wright, P.E. 登録日 2018-05-14 公開日 2019-05-22 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.66 Å) 主引用文献 A conformational switch in the zinc finger protein Kaiso mediates differential readout of specific and methylated DNA sequences. Biochemistry, 2020
6DFC	Kaiso (ZBTB33) zinc finger DNA binding domain in complex with the specific Kaiso binding sequence (KBS) with a T-to-U substitution 分子名称: CHLORIDE ION, DNA (5'-D(*CP*GP*TP*TP*AP*TP*TP*GP*GP*CP*AP*AP*GP*AP*AP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*TP*TP*CP*UP*TP*GP*CP*CP*AP*AP*TP*AP*AP*CP*G)-3'), ... 著者 Nikolova, E.N, Stanfield, R.L, Dyson, H.J, Wright, P.E. 登録日 2018-05-14 公開日 2019-05-22 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 A conformational switch in the zinc finger protein Kaiso mediates differential readout of specific and methylated DNA sequences. Biochemistry, 2020
6E0P	Cryo-EM structure of the centromeric nucleosome (Native alpha satellite DNA) in complex with a single chain antibody fragment 分子名称: DNA (145-MER), Histone H2A type 1-B/E, Histone H2B type 1-J, ... 著者 Yadav, K.N.S, Zhou, B.-R. 登録日 2018-07-06 公開日 2019-05-22 最終更新日 2019-12-18 実験手法 ELECTRON MICROSCOPY (2.6 Å) 主引用文献 Atomic resolution cryo-EM structure of a native-like CENP-A nucleosome aided by an antibody fragment. Nat Commun, 10, 2019
1GK7	HUMAN VIMENTIN COIL 1A FRAGMENT (1A) 分子名称: SULFATE ION, VIMENTIN 著者 Strelkov, S.V, Herrmann, H, Geisler, N, Zimbelmann, R, Aebi, U, Burkhard, P. 登録日 2001-08-08 公開日 2002-03-15 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Conserved Segments 1A and 2B of the Intermediate Filament Dimer: Their Atomic Structures and Role in Filament Assembly. Embo J., 21, 2002
7BGB	The H/ACA RNP lobe of human telomerase 分子名称: H/ACA ribonucleoprotein complex subunit 1, H/ACA ribonucleoprotein complex subunit 2, H/ACA ribonucleoprotein complex subunit 3, ... 著者 Nguyen, T.H.D, Ghanim, G.E, Fountain, A.J, van Roon, A.M.M, Rangan, R, Das, R, Collins, K. 登録日 2021-01-06 公開日 2021-04-28 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structure of human telomerase holoenzyme with bound telomeric DNA. Nature, 593, 2021
7DVQ	Cryo-EM Structure of the Activated Human Minor Spliceosome (minor Bact Complex) 分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, 5'-O-[(S)-hydroxy{[(R)-hydroxy{[(S)-hydroxy(methoxy)phosphoryl]oxy}phosphoryl]oxy}phosphoryl]guanosine, Armadillo repeat-containing protein 7, ... 著者 Bai, R, Wan, R, Wang, L, Xu, K, Zhang, Q, Lei, J, Shi, Y. 登録日 2021-01-14 公開日 2021-03-31 実験手法 ELECTRON MICROSCOPY (2.89 Å) 主引用文献 Structure of the activated human minor spliceosome. Science, 371, 2021
1H88	CRYSTAL STRUCTURE OF TERNARY PROTEIN-DNA COMPLEX1 分子名称: AMMONIUM ION, CCAAT/ENHANCER BINDING PROTEIN BETA, DNA(5'-(*CP*CP*AP*GP*TP*CP*CP*GP*TP*TP*AP* AP*GP*GP*AP*TP*TP*GP*CP*GP*CP*CP*AP*CP*AP*T)-3'), ... 著者 Tahirov, T.H, Ogata, K. 登録日 2001-01-29 公開日 2002-01-28 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Mechanism of C-Myb-C/Ebpbeta Cooperation from Separated Sites on a Promoter Cell(Cambridge,Mass.), 108, 2002
1GU5	Crystal structure of C/EBPBETA BZIP homodimer bound to a DNA fragment from the MIM-1 promoter 分子名称: 5'-D(*AP*TP*GP*AP*TP*TP*GP*GP*CP*CP* AP*AP*CP*AP*CP*A)-3', 5'-D(*TP*TP*GP*TP*GP*TP*TP*GP*GP*CP* CP*AP*AP*TP*CP*A)-3', CAAT/ENHANCER BINDING PROTEIN BETA 著者 Tahirov, T.H, Ogata, K. 登録日 2002-01-24 公開日 2003-06-26 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structural Basis for Flexible Base Recognition by C/Ebpbeta To be Published
1H8A	CRYSTAL STRUCTURE OF TERNARY PROTEIN-DNA COMPLEX3 分子名称: CAAT/ENHANCER BINDING PROTEIN BETA, DNA(5'-(*CP*CP*AP*GP*TP*CP*CP*GP*TP*TP*AP* AP*GP*GP*AP*TP*TP*GP*CP*GP*CP*CP*AP*CP*AP*T)-3'), DNA(5'-(*GP*AP*TP*GP*TP*GP*GP*CP*GP*CP*AP* AP*TP*CP*CP*TP*TP*AP*AP*CP*GP*GP*AP*CP*TP*G)-3'), ... 著者 Tahirov, T.H, Ogata, K. 登録日 2001-01-31 公開日 2002-01-28 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.23 Å) 主引用文献 Mechanism of C-Myb-C/Ebpbeta Cooperation from Separated Sites on a Promoter Cell(Cambridge,Mass.), 108, 2002
1GTW	crystal structure of C/EBPbeta bZip homodimer bound to a DNA fragment from the tom-1A promoter 分子名称: 5'-D(*AP*AP*TP*GP*TP*GP*GP*CP*GP*CP* AP*AP*TP*CP*CP*T)-3', 5'-D(*TP*AP*GP*GP*AP*TP*TP*GP*CP*GP* CP*CP*AP*CP*AP*T)-3', CAAT/ENHANCER BINDING PROTEIN BETA 著者 Tahirov, T.H, Ogata, K. 登録日 2002-01-22 公開日 2004-02-06 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Structural Basis for Flexible Base Recognition by C/Ebpbeta To be Published
1GU4	Crystal structure of C/EBPBETA BZIP homodimer bound to a high affinity DNA fragment 分子名称: 5'-D(*AP*AP*TP*AP*TP*TP*GP*CP*GP*CP* AP*AP*TP*CP*CP*T)-3', 5'-D(*TP*AP*GP*GP*AP*TP*TP*GP*CP*GP* CP*AP*AP*TP*AP*T)-3', CAAT/ENHANCER BINDING PROTEIN BETA 著者 Tahirov, T.H, Ogata, K. 登録日 2002-01-23 公開日 2003-06-26 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structural Basis for Flexible Base Recognition by C/Ebpbeta To be Published
3WKJ	The nucleosome containing human TSH2B 分子名称: CHLORIDE ION, DNA (145-MER), Histone H2A type 1-B/E, ... 著者 Urahama, T, Horikoshi, N, Osakabe, A, Tachiwana, H, Kurumizaka, H. 登録日 2013-10-22 公開日 2014-04-09 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structure of human nucleosome containing the testis-specific histone variant TSH2B. Acta Crystallogr.,Sect.F, 70, 2014
7DU2	RNA polymerase III EC complex in post-translocation state 分子名称: DNA (5'-D(P*GP*TP*CP*TP*GP*AP*TP*CP*TP*CP*GP*GP*AP*A)-3'), DNA (5'-D(P*TP*TP*CP*CP*GP*AP*GP*AP*TP*CP*AP*GP*AP*CP*GP*AP*GP*AP*T)-3'), DNA-directed RNA polymerase III subunit RPC1, ... 著者 Li, L, Yu, Z, Zhao, D, Ren, Y, Hou, H, Xu, Y. 登録日 2021-01-07 公開日 2021-03-17 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (3.35 Å) 主引用文献 Structure of human RNA polymerase III elongation complex. Cell Res., 31, 2021
3X1V	Crystal structure of nucleosome core particle in the presence of histone variant involved in reprogramming 分子名称: CHLORIDE ION, DNA (146-MER), Histone H2A type 1-B/E, ... 著者 Sivaraman, P, Kumarevel, T.S. 登録日 2014-11-28 公開日 2015-09-23 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.921 Å) 主引用文献 Structural and functional analyses of nucleosome complexes with mouse histone variants TH2a and TH2b, involved in reprogramming Biochem.Biophys.Res.Commun., 464, 2015
3X1T	Crystal structure of nucleosome core particle consisting of mouse testis specific histone variants H2aa and H2ba 分子名称: CHLORIDE ION, DNA (146-MER), Histone H2A, ... 著者 Sivaraman, P, Kumarevel, T.S. 登録日 2014-11-27 公開日 2015-09-23 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.808 Å) 主引用文献 Structural and functional analyses of nucleosome complexes with mouse histone variants TH2a and TH2b, involved in reprogramming Biochem.Biophys.Res.Commun., 464, 2015
6RPR	LEM domain of Emerin mutant T43I in complex with BAF dimer and the Igfold of the lamin A/C 分子名称: LEM domain of emerin mutant T43I, Prelamin-A/C, SULFATE ION, ... 著者 Essawy, N, Samson, C. 登録日 2019-05-14 公開日 2020-03-04 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.26 Å) 主引用文献 An Emerin LEM-Domain Mutation Impairs Cell Response to Mechanical Stress. Cells, 8, 2019
6S1N	Human polymerase delta holoenzyme Conformer 2 分子名称: DNA polymerase delta catalytic subunit, DNA polymerase delta subunit 2, DNA polymerase delta subunit 3, ... 著者 Lancey, C, Hamdan, S.M, De Biasio, A. 登録日 2019-06-19 公開日 2019-12-25 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (4.86 Å) 主引用文献 Structure of the processive human Pol delta holoenzyme. Nat Commun, 11, 2020
6S1O	Human polymerase delta holoenzyme Conformer 3 分子名称: DNA polymerase delta catalytic subunit, DNA polymerase delta subunit 2, DNA polymerase delta subunit 3, ... 著者 Lancey, C, Hamdan, S.M, De Biasio, A. 登録日 2019-06-19 公開日 2019-12-25 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (8.1 Å) 主引用文献 Structure of the processive human Pol delta holoenzyme. Nat Commun, 11, 2020
6SE6	Class2 : CENP-A nucleosome in complex with CENP-C central region 分子名称: Centromere protein C, DNA (145-MER), Histone H2A type 2-A, ... 著者 Ali-Ahmad, A, Bilokapic, S, Schafer, I.B, Halic, M, Sekulic, N. 登録日 2019-07-29 公開日 2019-08-14 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 CENP-C unwraps the human CENP-A nucleosome through the H2A C-terminal tail. Embo Rep., 20, 2019
6SEE	Class2A : CENP-A nucleosome in complex with CENP-C central region 分子名称: Centromere protein C, DNA (145-MER), Histone H2A type 2-A, ... 著者 Ali-Ahmad, A, Bilokapic, S, Schafer, I.B, Halic, M, Sekulic, N. 登録日 2019-07-29 公開日 2019-08-14 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (4.2 Å) 主引用文献 CENP-C unwraps the human CENP-A nucleosome through the H2A C-terminal tail. Embo Rep., 20, 2019
6SEF	Class2C : CENP-A nucleosome in complex with CENP-C central region 分子名称: Centromere protein C, DNA (145-MER), Histone H2A type 2-A, ... 著者 Ali-Ahmad, A, Bilokapic, S, Schafer, I.B, Halic, M, Sekulic, N. 登録日 2019-07-29 公開日 2019-08-14 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 CENP-C unwraps the human CENP-A nucleosome through the H2A C-terminal tail. Embo Rep., 20, 2019
6SYF	Human Ubc9 with covalent isopeptide ligand 分子名称: ACE-ILE-LYS-GLN-GLU, ACE-LEU-ARG-LEU-ARG-GLY-CYS, SUMO-conjugating enzyme UBC9 著者 Hofmann, R, Akimoto, G, Wucherpfennig, T.G, Zeymer, C, Bode, J.W. 登録日 2019-09-27 公開日 2020-08-12 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Lysine acylation using conjugating enzymes for site-specific modification and ubiquitination of recombinant proteins. Nat.Chem., 12, 2020

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