Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6P6K
DownloadVisualize
BU of 6p6k by Molmil
Co-crystal Structure of human SMYD3 with Isoxazole Amides Inhibitors
分子名称: 1,2-ETHANEDIOL, Histone-lysine N-methyltransferase SMYD3, MAGNESIUM ION, ...
著者Elkins, P.A, Wang, L.
登録日2019-06-04
公開日2020-01-15
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Discovery of Isoxazole Amides as Potent and Selective SMYD3 Inhibitors.
Acs Med.Chem.Lett., 11, 2020
5XM1
DownloadVisualize
BU of 5xm1 by Molmil
The mouse nucleosome structure containing H2A, H2B type3-A, H3mm7, and H4
分子名称: DNA (146-MER), Histone H2A type 1-B, Histone H2B type 3-A, ...
著者Taguchi, H, Horikoshi, N, Kurumizaka, H.
登録日2017-05-12
公開日2018-03-07
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.45 Å)
主引用文献Histone H3.3 sub-variant H3mm7 is required for normal skeletal muscle regeneration.
Nat Commun, 9, 2018
5Y3R
DownloadVisualize
BU of 5y3r by Molmil
Cryo-EM structure of Human DNA-PK Holoenzyme
分子名称: DNA (34-MER), DNA (36-MER), DNA-dependent protein kinase catalytic subunit, ...
著者Yin, X, Liu, M, Tian, Y, Wang, J, Xu, Y.
登録日2017-07-29
公開日2017-09-06
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (6.6 Å)
主引用文献Cryo-EM structure of human DNA-PK holoenzyme
Cell Res., 27, 2017
6P7Z
DownloadVisualize
BU of 6p7z by Molmil
Co-crystal Structure of human SMYD3 with Isoxazole Amides Inhibitors
分子名称: 5-cyclopropyl-N-[1-(methylsulfonyl)piperidin-4-yl]-1,2-oxazole-3-carboxamide, Histone-lysine N-methyltransferase SMYD3, MAGNESIUM ION, ...
著者Elkins, P.A, Bonnette, W.G.
登録日2019-06-06
公開日2020-01-15
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.19 Å)
主引用文献Discovery of Isoxazole Amides as Potent and Selective SMYD3 Inhibitors.
Acs Med.Chem.Lett., 11, 2020
6PAF
DownloadVisualize
BU of 6paf by Molmil
Co-crystal Structure of human SMYD3 with Isoxazole Amides Inhibitors
分子名称: GLYCEROL, Histone-lysine N-methyltransferase SMYD3, MAGNESIUM ION, ...
著者Elkins, P.A, Wang, L.
登録日2019-06-11
公開日2020-01-15
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.241 Å)
主引用文献Discovery of Isoxazole Amides as Potent and Selective SMYD3 Inhibitors.
Acs Med.Chem.Lett., 11, 2020
8PLZ
DownloadVisualize
BU of 8plz by Molmil
Cryo-EM structure of CAK in complex with inhibitor CT7030
分子名称: (3~{R},4~{R})-4-[[[7-[(2-methoxyphenyl)methylamino]-3-propan-2-yl-pyrazolo[1,5-a]pyrimidin-5-yl]amino]methyl]piperidin-3-ol, CDK-activating kinase assembly factor MAT1, Cyclin-H, ...
著者Cushing, V.I, Koh, A.F, Feng, J, Jurgaityte, K, Bahl, A.K, Ali, S, Kotecha, A, Greber, B.J.
登録日2023-06-27
公開日2024-03-20
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (1.9 Å)
主引用文献High-resolution cryo-EM of the human CDK-activating kinase for structure-based drug design.
Nat Commun, 15, 2024
6QNX
DownloadVisualize
BU of 6qnx by Molmil
Structure of the SA2/SCC1/CTCF complex
分子名称: Cohesin subunit SA-2, Double-strand-break repair protein rad21 homolog, Transcriptional repressor CTCF
著者Li, Y, Muir, K.W, Panne, D.
登録日2019-02-12
公開日2020-01-22
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献The structural basis for cohesin-CTCF-anchored loops.
Nature, 578, 2020
8SZK
DownloadVisualize
BU of 8szk by Molmil
The cryo-EM structure of PPP2R5A/HIV-1 Vif/CBFb/EloB/EloC complex
分子名称: Core-binding factor subunit beta, Elongin-B, Elongin-C, ...
著者Hu, Y, Xiong, Y.
登録日2023-05-30
公開日2024-06-05
実験手法ELECTRON MICROSCOPY (3.58 Å)
主引用文献Structural insights into PPP2R5A degradation by HIV-1 Vif.
Nat.Struct.Mol.Biol., 2024
2HYU
DownloadVisualize
BU of 2hyu by Molmil
Human Annexin A2 with heparin tetrasaccharide bound
分子名称: 4-deoxy-2-O-sulfo-alpha-L-threo-hex-4-enopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose, Annexin A2, CALCIUM ION
著者Shao, C, Head, J.F, Seaton, B.A.
登録日2006-08-07
公開日2006-09-05
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Crystallographic Analysis of Calcium-dependent Heparin Binding to Annexin A2.
J.Biol.Chem., 281, 2006
2HYW
DownloadVisualize
BU of 2hyw by Molmil
Human Annexin A2 with Calcium bound
分子名称: Annexin A2, CALCIUM ION
著者Shao, C, Head, J.F, Seaton, B.A.
登録日2006-08-07
公開日2006-09-05
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystallographic Analysis of Calcium-dependent Heparin Binding to Annexin A2.
J.Biol.Chem., 281, 2006
2HYV
DownloadVisualize
BU of 2hyv by Molmil
Human Annexin A2 with heparin hexasaccharide bound
分子名称: 4-deoxy-2-O-sulfo-alpha-L-threo-hex-4-enopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid, Annexin A2, CALCIUM ION
著者Shao, C, Head, J.F, Seaton, B.A.
登録日2006-08-07
公開日2006-09-05
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Crystallographic analysis of calcium-dependent heparin binding to annexin A2.
J.Biol.Chem., 281, 2006
4UUV
DownloadVisualize
BU of 4uuv by Molmil
Structure of the DNA binding ETS domain of human ETV4 in complex with DNA
分子名称: 5'-D(*AP*CP*CP*GP*GP*AP*AP*GP*TP*GP)-3', 5'-D(*AP*CP*TP*TP*CP*CP*GP*GP*TP*CP)-3', ETS TRANSLOCATION VARIANT 4
著者Newman, J.A, Cooper, C.D.O, Kopec, J, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Gileadi, O.
登録日2014-07-31
公開日2014-08-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structures of the Ets Domains of Transcription Factors Etv1, Etv4, Etv5 and Fev: Determinants of DNA Binding and Redox Regulation by Disulfide Bond Formation.
J.Biol.Chem., 290, 2015
5OMG
DownloadVisualize
BU of 5omg by Molmil
p38alpha in complex with pyrazolobenzothiazine inhibitor COXP4M12
分子名称: 3-(4-fluorophenyl)-4-methyl-1~{H}-pyrazolo[4,3-c][1,2]benzothiazine 5,5-dioxide, Mitogen-activated protein kinase 14, octyl beta-D-glucopyranoside
著者Buehrmann, M, Rauh, D.
登録日2017-07-31
公開日2019-03-13
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Co-crystal structure determination and cellular evaluation of 1,4-dihydropyrazolo[4,3-c] [1,2] benzothiazine 5,5-dioxide p38 alpha MAPK inhibitors.
Biochem.Biophys.Res.Commun., 511, 2019
6TWU
DownloadVisualize
BU of 6twu by Molmil
MAGI1_2 complexed with a phosphomimetic 16E6 peptide
分子名称: CALCIUM ION, CITRIC ACID, GLYCEROL, ...
著者Gogl, G, Cousido-Siah, A, Trave, G.
登録日2020-01-13
公開日2020-04-01
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Dual Specificity PDZ- and 14-3-3-Binding Motifs: A Structural and Interactomics Study.
Structure, 28, 2020
6TWQ
DownloadVisualize
BU of 6twq by Molmil
MAGI1_2 complexed with a 16E6 peptide
分子名称: CALCIUM ION, CITRIC ACID, GLYCEROL, ...
著者Gogl, G, Cousido-Siah, A, Trave, G.
登録日2020-01-13
公開日2020-04-01
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Dual Specificity PDZ- and 14-3-3-Binding Motifs: A Structural and Interactomics Study.
Structure, 28, 2020
4R3C
DownloadVisualize
BU of 4r3c by Molmil
Crystal structure of p38 alpha MAP kinase in complex with a novel isoform selective drug candidate
分子名称: 4-[3-(4-FLUOROPHENYL)-1H-PYRAZOL-4-YL]PYRIDINE, 6-(4-methylpiperazin-1-yl)-3-(naphthalen-2-yl)-4-(pyridin-4-yl)pyridazine, CHLORIDE ION, ...
著者Grum-Tokars, V.L, Minasov, G, Roy, S.M, Anderson, W.F, Watterson, D.M.
登録日2014-08-14
公開日2015-02-25
最終更新日2017-11-22
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献Targeting human central nervous system protein kinases: An isoform selective p38 alpha MAPK inhibitor that attenuates disease progression in Alzheimer's disease mouse models.
ACS Chem Neurosci, 6, 2015
5O8V
DownloadVisualize
BU of 5o8v by Molmil
Covalent Inhibitor 4a bound to the Lipid Pocket of p38alpha Mutant S251C
分子名称: Mitogen-activated protein kinase 14, ~{N}-[3-[7-azanyl-4-(2-phenylethylamino)quinazolin-2-yl]phenyl]propanamide
著者Buehrmann, M, Rauh, D.
登録日2017-06-14
公開日2017-09-06
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Covalent Lipid Pocket Ligands Targeting p38 alpha MAPK Mutants.
Angew. Chem. Int. Ed. Engl., 56, 2017
8OF4
DownloadVisualize
BU of 8of4 by Molmil
Nucleosome Bound human SIRT6 (Composite)
分子名称: DNA (145-MER), Histone H2A type 1, Histone H2B, ...
著者Smirnova, E, Bignon, E, Schultz, P, Papai, G, Ben-Shem, A.
登録日2023-03-13
公開日2023-08-09
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (2.94 Å)
主引用文献Binding to nucleosome poises human SIRT6 for histone H3 deacetylation.
Elife, 12, 2024
8H2H
DownloadVisualize
BU of 8h2h by Molmil
Cryo-EM structure of a Group II Intron Complexed with its Reverse Transcriptase
分子名称: Group II intron-encoded protein LtrA, LtrB, RNA (5'-R(P*CP*AP*CP*AP*UP*CP*CP*AP*UP*AP*AP*C)-3')
著者Liu, N, Dong, X.L, Qu, G.S, Wang, J, Wang, H.W, Belfort, M.
登録日2022-10-06
公開日2022-11-23
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Functionalized graphene grids with various charges for single-particle cryo-EM.
Nat Commun, 13, 2022
5O8U
DownloadVisualize
BU of 5o8u by Molmil
Covalent Inhibitor 4b bound to the Lipid Pocket of p38alpha Mutant S252C
分子名称: 4-[3-[7-azanyl-4-(2-phenylethylamino)quinazolin-2-yl]phenyl]butan-2-one, Mitogen-activated protein kinase 14
著者Buehrmann, M, Rauh, D.
登録日2017-06-14
公開日2017-09-06
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Covalent Lipid Pocket Ligands Targeting p38 alpha MAPK Mutants.
Angew. Chem. Int. Ed. Engl., 56, 2017
8ORM
DownloadVisualize
BU of 8orm by Molmil
Cryo-EM structure of CAK-THZ1
分子名称: CDK-activating kinase assembly factor MAT1, Cyclin-H, Cyclin-dependent kinase 7, ...
著者Cushing, V.I, Koh, A.F, Feng, J, Jurgaityte, K, Bahl, A.K, Ali, S, Kotecha, A, Greber, B.J.
登録日2023-04-14
公開日2023-08-30
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (1.9 Å)
主引用文献High-resolution cryo-EM of the human CDK-activating kinase for structure-based drug design.
Nat Commun, 15, 2024
6TWX
DownloadVisualize
BU of 6twx by Molmil
MAGI1_2 complexed with a phosphorylated 16E6 peptide
分子名称: 16E6 peptide, CALCIUM ION, CITRIC ACID, ...
著者Gogl, G, Cousido-Siah, A, Trave, G.
登録日2020-01-13
公開日2020-04-01
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Dual Specificity PDZ- and 14-3-3-Binding Motifs: A Structural and Interactomics Study.
Structure, 28, 2020
8P6Y
DownloadVisualize
BU of 8p6y by Molmil
Cryo-EM structure of CAK in complex with nucleotide analogue ATPgS
分子名称: CDK-activating kinase assembly factor MAT1, Cyclin-H, Cyclin-dependent kinase 7, ...
著者Cushing, V.I, Koh, A.F, Feng, J, Jurgaityte, K, Bahl, A.K, Ali, S, Kotecha, A, Greber, B.J.
登録日2023-05-30
公開日2023-08-30
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (1.9 Å)
主引用文献High-resolution cryo-EM of the human CDK-activating kinase for structure-based drug design.
Nat Commun, 15, 2024
8P6V
DownloadVisualize
BU of 8p6v by Molmil
Cryo-EM structure of CAK in complex with inhibitor ICEC0942
分子名称: (3R,4R)-4-[[[7-[(phenylmethyl)amino]-3-propan-2-yl-pyrazolo[1,5-a]pyrimidin-5-yl]amino]methyl]piperidin-3-ol, CDK-activating kinase assembly factor MAT1, Cyclin-H, ...
著者Cushing, V.I, Koh, A.F, Feng, J, Jurgaityte, K, Bahl, A.K, Ali, S, Kotecha, A, Greber, B.J.
登録日2023-05-30
公開日2023-08-30
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (1.9 Å)
主引用文献High-resolution cryo-EM of the human CDK-activating kinase for structure-based drug design.
Nat Commun, 15, 2024
5OMH
DownloadVisualize
BU of 5omh by Molmil
p38alpha in complex with pyrazolobenzothiazine inhibitor COXH11
分子名称: 1-(3-chlorophenyl)-3-methyl-4~{H}-pyrazolo[4,3-c][1,2]benzothiazine 5,5-dioxide, Mitogen-activated protein kinase 14
著者Buehrmann, M, Rauh, D.
登録日2017-07-31
公開日2019-03-13
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Co-crystal structure determination and cellular evaluation of 1,4-dihydropyrazolo[4,3-c] [1,2] benzothiazine 5,5-dioxide p38 alpha MAPK inhibitors.
Biochem.Biophys.Res.Commun., 511, 2019

224931

件を2024-09-11に公開中

PDB statisticsPDBj update infoContact PDBjnumon