PDB: 45118 件ウェブページステータス検索Chemie searchBIRD

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4Q69	Crystal structure of a SusD homolog (BT2259) from Bacteroides thetaiotaomicron VPI-5482 at 2.50 A resolution 分子名称: CHLORIDE ION, GLYCEROL, Putative lipoprotein, ... 著者 Joint Center for Structural Genomics (JCSG) 登録日 2014-04-21 公開日 2014-06-25 最終更新日 2023-02-01 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Crystal structure of a SusD homolog (BT2259) from Bacteroides thetaiotaomicron VPI-5482 at 2.50 A resolution To be published
7MXO	CryoEM structure of human NKCC1 分子名称: CHLORIDE ION, POTASSIUM ION, Solute carrier family 12 member 2 著者 Moseng, M.A. 登録日 2021-05-19 公開日 2022-09-28 最終更新日 2023-05-31 実験手法 ELECTRON MICROSCOPY (3.47 Å) 主引用文献 Inhibition mechanism of NKCC1 involves the carboxyl terminus and long-range conformational coupling. Sci Adv, 8, 2022
2ZNB	METALLO-BETA-LACTAMASE (CADMIUM-BOUND FORM) 分子名称: CADMIUM ION, METALLO-BETA-LACTAMASE, SODIUM ION 著者 Concha, N.O, Herzberg, O. 登録日 1997-10-14 公開日 1998-01-28 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Crystal structures of the cadmium- and mercury-substituted metallo-beta-lactamase from Bacteroides fragilis. Protein Sci., 6, 1997
2ZSG	Crystal structure of X-Pro aminopeptidase from Thermotoga maritima MSB8 分子名称: Aminopeptidase P, putative, CHLORIDE ION, ... 著者 Mizutani, H, Kunishima, N. 登録日 2008-09-10 公開日 2008-10-14 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Crystal structure of X-Pro aminopeptidase from Thermotoga maritima MSB8 To be Published
7JSJ	Structure of the NaCT-PF2 complex 分子名称: (2R)-2-[2-(4-tert-butylphenyl)ethyl]-2-hydroxybutanedioic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, SODIUM ION, ... 著者 Sauer, D.B, Wang, B, Song, J, Rice, W.J, Wang, D.N. 登録日 2020-08-14 公開日 2021-02-24 最終更新日 2021-03-10 実験手法 ELECTRON MICROSCOPY (3.12 Å) 主引用文献 Structure and inhibition mechanism of the human citrate transporter NaCT. Nature, 591, 2021
7NBG	Crystal structure of human serine racemase in complex with DSiP fragment Z52314092, XChem fragment screen. 分子名称: 1,2-ETHANEDIOL, 2-(2-METHOXYETHOXY)ETHANOL, CALCIUM ION, ... 著者 Koulouris, C.R, Roe, S.M. 登録日 2021-01-26 公開日 2021-03-03 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.53 Å) 主引用文献 Tyrosine 121 moves revealing a ligandable pocket that couples catalysis to ATP-binding in serine racemase. Commun Biol, 5, 2022
7NBH	Crystal structure of human serine racemase in complex with DSiP fragment Z26781964, XChem fragment screen. 分子名称: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ... 著者 Koulouris, C.R, Roe, S.M. 登録日 2021-01-26 公開日 2021-03-03 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.77 Å) 主引用文献 Tyrosine 121 moves revealing a ligandable pocket that couples catalysis to ATP-binding in serine racemase. Commun Biol, 5, 2022
7JSK	Structure of the NaCT-Citrate complex 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CITRIC ACID, SODIUM ION, ... 著者 Sauer, D.B, Wang, B, Song, J, Rice, W.J, Wang, D.N. 登録日 2020-08-14 公開日 2021-02-24 最終更新日 2021-03-10 実験手法 ELECTRON MICROSCOPY (3.04 Å) 主引用文献 Structure and inhibition mechanism of the human citrate transporter NaCT. Nature, 591, 2021
6XFR	Metallo-beta-lactamase from Pontibacter korlensis 分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Lactamase_B domain-containing protein, SODIUM ION, ... 著者 Schenk, G, Schembri, M.A, Prombhul, S. 登録日 2020-06-16 公開日 2021-06-23 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.608 Å) 主引用文献 Metallo-beta-lactamase from Pontibacter korlensis To Be Published
7NBC	Crystal structure of human serine racemase in complex with DSiP fragment Z2856434779, XChem fragment screen. 分子名称: 1,2-ETHANEDIOL, 2-(2-METHOXYETHOXY)ETHANOL, CALCIUM ION, ... 著者 Koulouris, C.R, Roe, S.M. 登録日 2021-01-26 公開日 2021-03-03 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.71 Å) 主引用文献 Tyrosine 121 moves revealing a ligandable pocket that couples catalysis to ATP-binding in serine racemase. Commun Biol, 5, 2022
7NBF	Crystal structure of human serine racemase in complex with DSiP fragment Z126932614, XChem fragment screen. 分子名称: 1,2-ETHANEDIOL, 2-[(methylsulfonyl)methyl]-1H-benzimidazole, CALCIUM ION, ... 著者 Koulouris, C.R, Roe, S.M. 登録日 2021-01-26 公開日 2021-03-03 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Tyrosine 121 moves revealing a ligandable pocket that couples catalysis to ATP-binding in serine racemase. Commun Biol, 5, 2022
6XNL	GCN4-p1 Peptide Trimer with iodo-phenylalanine residue at position 16 (IPF-F16) 分子名称: GCN4-p1 Peptide with A16, GCN4-p1 Peptide with IPF-F16, SODIUM ION 著者 Rowe Hartje, R.K, Czarny, R.S, Ho, A. 登録日 2020-07-03 公開日 2021-07-07 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Engineering Specific Protein-Protein Interactions Through Halogen and Hydrogen Bonds To Be Published
7SFL	Human NKCC1 state Fu-II 分子名称: 5-(AMINOSULFONYL)-4-CHLORO-2-[(2-FURYLMETHYL)AMINO]BENZOIC ACID, Solute carrier family 12 member 2 著者 Moseng, M.A. 登録日 2021-10-04 公開日 2022-09-28 最終更新日 2023-05-31 実験手法 ELECTRON MICROSCOPY (3.87 Å) 主引用文献 Inhibition mechanism of NKCC1 involves the carboxyl terminus and long-range conformational coupling. Sci Adv, 8, 2022
7SMP	CryoEM structure of NKCC1 Bu-I 分子名称: 3-(butylamino)-4-phenoxy-5-sulfamoylbenzoic acid, POTASSIUM ION, Solute carrier family 12 member 2 著者 Moseng, M.A. 登録日 2021-10-26 公開日 2022-09-28 最終更新日 2023-05-31 実験手法 ELECTRON MICROSCOPY (3.28 Å) 主引用文献 Inhibition mechanism of NKCC1 involves the carboxyl terminus and long-range conformational coupling. Sci Adv, 8, 2022
8U9B	Crystal Structure of Betaine aldehyde dehydrogenase (BetB) from Klebsiella aerogenes (Apo, P21 Form) 分子名称: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Betaine aldehyde dehydrogenase, ... 著者 Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2023-09-18 公開日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal Structure of Betaine aldehyde dehydrogenase (BetB) from Klebsiella aerogenes (Apo, P21 Form) To be published
6Y72	Pseudomonas stutzeri nitrous oxide reductase mutant, H178A 分子名称: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, CHLORIDE ION, ... 著者 Zhang, L, Kroneck, P.M.H, Einsle, O. 登録日 2020-02-27 公開日 2021-01-27 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 A [3Cu:2S] cluster provides insight into the assembly and function of the Cu Z site of nitrous oxide reductase. Chem Sci, 12, 2021
8TS5	Structure of the apo FabS1C_C1 分子名称: 1,2-ETHANEDIOL, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, ... 著者 Singer, A.U, Bruce, H.A, Blazer, L.L, Adams, J.J, Sicheri, F, Sidhu, S.S. 登録日 2023-08-10 公開日 2023-11-22 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Engineered antigen-binding fragments for enhanced crystallization of antibody:antigen complexes. Protein Sci., 33, 2024
8TRS	Structure of the EphA2 CRD bound to FabS1CE_C1, trigonal form 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ... 著者 Singer, A.U, Bruce, H.A, Blazer, L, Adams, J.J, Sicheri, F, Sidhu, S.S. 登録日 2023-08-10 公開日 2023-11-22 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Engineered antigen-binding fragments for enhanced crystallization of antibody:antigen complexes. Protein Sci., 33, 2024
6YBZ	Crystal structure of the D116N mutant of the light-driven sodium pump KR2 in the pentameric form, pH 8.0 分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, EICOSANE, RETINAL, ... 著者 Kovalev, K, Gushchin, I, Gordeliy, V. 登録日 2020-03-18 公開日 2020-04-08 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Molecular mechanism of light-driven sodium pumping. Nat Commun, 11, 2020
6YHN	Crystal structure of domains 4-5 of CNFy from Yersinia pseudotuberculosis 分子名称: (R,R)-2,3-BUTANEDIOL, CHLORIDE ION, Cytotoxic necrotizing factor, ... 著者 Lukat, P, Gazdag, E.M, Heidler, T.V, Blankenfeldt, W. 登録日 2020-03-30 公開日 2020-12-30 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Crystal structure of bacterial cytotoxic necrotizing factor CNF Y reveals molecular building blocks for intoxication. Embo J., 40, 2021
7NPI	Crystal structure of Mindy2 (C266A) in complex with Lys48-linked penta-ubiquitin (K48-Ub5) 分子名称: CHLORIDE ION, Polyubiquitin-C, SODIUM ION, ... 著者 Lange, S.M, Armstrong, L.A, Kulathu, Y. 登録日 2021-02-26 公開日 2021-09-15 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.81 Å) 主引用文献 Mechanism of activation and regulation of deubiquitinase activity in MINDY1 and MINDY2. Mol.Cell, 81, 2021
5TCD	Human alkaline sphingomyelinase (ENPP7) in complex with phosphocholine 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Gorelik, A, Liu, F, Illes, K, Nagar, B. 登録日 2016-09-14 公開日 2017-03-22 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal structure of the human alkaline sphingomyelinase provides insights into substrate recognition. J. Biol. Chem., 292, 2017
6Y71	Pseudomonas stutzeri nitrous oxide reductase mutant, H130A 分子名称: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, CHLORIDE ION, ... 著者 Zhang, L, Kroneck, P.M.H, Einsle, O. 登録日 2020-02-27 公開日 2021-01-27 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.64 Å) 主引用文献 A [3Cu:2S] cluster provides insight into the assembly and function of the Cu Z site of nitrous oxide reductase. Chem Sci, 12, 2021
5UD1	Class II fructose-1,6-bisphosphate aldolase H180Q variant of Helicobacter pylori 分子名称: Fructose-bisphosphate aldolase, SODIUM ION, ZINC ION 著者 Jacques, B, Sygusch, J. 登録日 2016-12-23 公開日 2018-04-11 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.795 Å) 主引用文献 Active site remodeling during the catalytic cycle in metal-dependent fructose-1,6-bisphosphate aldolases. J. Biol. Chem., 293, 2018
6YC3	Crystal structure of the light-driven sodium pump KR2 in the pentameric form, pH 8.0 分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, EICOSANE, RETINAL, ... 著者 Kovalev, K, Gushchin, I, Gordeliy, V. 登録日 2020-03-18 公開日 2020-04-08 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Molecular mechanism of light-driven sodium pumping. Nat Commun, 11, 2020

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