Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

7VHF
DownloadVisualize
BU of 7vhf by Molmil
Crystal structure of the STX2a complexed with RRA peptide
分子名称: 3-PYRIDINIUM-1-YLPROPANE-1-SULFONATE, GLYCEROL, RRA peptide, ...
著者Senda, M, Takahashi, M, Nishikawa, K, Senda, T.
登録日2021-09-22
公開日2022-07-20
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献A unique peptide-based pharmacophore identifies an inhibitory compound against the A-subunit of Shiga toxin.
Sci Rep, 12, 2022
7VHE
DownloadVisualize
BU of 7vhe by Molmil
Crystal structure of the STX2a complexed with RRRA peptide
分子名称: 3-PYRIDINIUM-1-YLPROPANE-1-SULFONATE, GLYCEROL, RRRA peptide, ...
著者Senda, M, Takahashi, M, Nishikawa, K, Senda, T.
登録日2021-09-22
公開日2022-07-20
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A unique peptide-based pharmacophore identifies an inhibitory compound against the A-subunit of Shiga toxin.
Sci Rep, 12, 2022
7VHD
DownloadVisualize
BU of 7vhd by Molmil
Crystal structure of the STX2a complexed with R4A peptide
分子名称: 3-PYRIDINIUM-1-YLPROPANE-1-SULFONATE, ARG-ARG-ARG-ARG-ALA, Shiga toxin 2 B subunit, ...
著者Senda, M, Takahashi, M, Nishikawa, K, Senda, T.
登録日2021-09-22
公開日2022-07-20
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A unique peptide-based pharmacophore identifies an inhibitory compound against the A-subunit of Shiga toxin.
Sci Rep, 12, 2022
6JBU
DownloadVisualize
BU of 6jbu by Molmil
High resolution crystal structure of human FLRT3 LRR domain in complex with mouse CIRL3 Olfactomedin like domain
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Adhesion G protein-coupled receptor L3, ...
著者Liu, H, Li, Z, Xu, F.
登録日2019-01-26
公開日2020-01-29
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (1.849 Å)
主引用文献High resolution crystal structure of human FLRT3 LRR domain in complex with mouse CIRL3 Olfactomedin like domain
To Be Published
4W99
DownloadVisualize
BU of 4w99 by Molmil
Apo-structure of the Y79F,W322E-double mutant of Etr1p
分子名称: Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1, mitochondrial, ...
著者Quade, N, Voegeli, B, Rosenthal, R, Erb, T.J.
登録日2014-08-27
公開日2015-03-18
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The use of ene adducts to study and engineer enoyl-thioester reductases.
Nat.Chem.Biol., 11, 2015
6JIT
DownloadVisualize
BU of 6jit by Molmil
Complex structure of an imine reductase at 2.05 Angstrom resolution
分子名称: 1-(2-phenylethyl)-3,4-dihydroisoquinoline, 6-phosphogluconate dehydrogenase NAD-binding protein, CHLORIDE ION, ...
著者Li, H, Wu, L, Zheng, G.W, Zhou, J.H.
登録日2019-02-23
公開日2020-02-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.052 Å)
主引用文献Complex structure of an imine reductase at 2.05 Angstrom resolution
To Be Published
9HE9
DownloadVisualize
BU of 9he9 by Molmil
Unspecific peroxygenase from Psathyrella aberdarensis (PabUPO-II) in complex with lauric acid
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GLYCEROL, ...
著者Fernandez-Garcia, A, Sanz-Aparicio, J.
登録日2024-11-13
公開日2025-02-26
最終更新日2025-03-05
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Characterization of Recombinant Unspecific Peroxygenase from Candolleomyces aberdarensis through Crystallographic and Substrate Selectivity Studies
Chemcatchem, 2025
6IMO
DownloadVisualize
BU of 6imo by Molmil
Crystal structure of PDE4D complexed with a novel inhibitor
分子名称: (1S)-1-[(1H-indol-3-yl)methyl]-6,7-dimethoxy-3,4-dihydroisoquinoline-2(1H)-carbaldehyde, 1,2-ETHANEDIOL, MAGNESIUM ION, ...
著者Zhang, X.L, Su, H.X, Xu, Y.C.
登録日2018-10-23
公開日2019-10-23
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structure-Aided Identification and Optimization of Tetrahydro-isoquinolines as Novel PDE4 Inhibitors Leading to Discovery of an Effective Antipsoriasis Agent.
J.Med.Chem., 62, 2019
7VSG
DownloadVisualize
BU of 7vsg by Molmil
Cryo-EM structure of a human ATP11C-CDC50A flippase reconstituted in the Nanodisc in PtdSer-occluded E2-Pi state.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Cell cycle control protein 50A, O-[(S)-({(2R)-2,3-bis[(9Z)-octadec-9-enoyloxy]propyl}oxy)(hydroxy)phosphoryl]-L-serine, ...
著者Nakanishii, H, Abe, K.
登録日2021-10-26
公開日2021-12-29
最終更新日2024-11-13
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Cryo-EM of the ATP11C flippase reconstituted in Nanodiscs shows a distended phospholipid bilayer inner membrane around transmembrane helix 2.
J.Biol.Chem., 298, 2022
7VSH
DownloadVisualize
BU of 7vsh by Molmil
Cryo-EM structure of a human ATP11C-CDC50A flippase reconstituted in the Nanodisc in E1P state.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Cell cycle control protein 50A, MAGNESIUM ION, ...
著者Nakanishii, H, Abe, K.
登録日2021-10-26
公開日2021-12-29
最終更新日2024-11-06
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Cryo-EM of the ATP11C flippase reconstituted in Nanodiscs shows a distended phospholipid bilayer inner membrane around transmembrane helix 2.
J.Biol.Chem., 298, 2022
6IMT
DownloadVisualize
BU of 6imt by Molmil
Crystal structure of PDE4D complexed with a novel inhibitor
分子名称: (1S)-1-[2-(6-fluoro-1H-indol-3-yl)ethyl]-6,7-dimethoxy-3,4-dihydroisoquinoline-2(1H)-carbaldehyde, 1,2-ETHANEDIOL, MAGNESIUM ION, ...
著者Zhang, X.L, Su, H.X, Xu, Y.C.
登録日2018-10-23
公開日2019-10-23
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.483 Å)
主引用文献Structure-Aided Identification and Optimization of Tetrahydro-isoquinolines as Novel PDE4 Inhibitors Leading to Discovery of an Effective Antipsoriasis Agent.
J.Med.Chem., 62, 2019
4U6S
DownloadVisualize
BU of 4u6s by Molmil
CtBP1 in complex with substrate phenylpyruvate
分子名称: 3-PHENYLPYRUVIC ACID, C-terminal-binding protein 1, CALCIUM ION, ...
著者Hilbert, B.J, Morris, B.L, Ellis, K.C, Paulsen, J.L, Schiffer, C.A, Grossman, S.R, Royer Jr, W.E.
登録日2014-07-29
公開日2015-02-11
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure-Guided Design of a High Affinity Inhibitor to Human CtBP.
Acs Chem.Biol., 10, 2015
4UM1
DownloadVisualize
BU of 4um1 by Molmil
Engineered Ls-AChBP with alpha4-alpha4 binding pocket in complex with NS3573
分子名称: 1-(5-ethoxypyridin-3-yl)-1,4-diazepane, 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETYLCHOLINE-BINDING PROTEIN
著者Shahsavar, A, Kastrup, J.S, Balle, T, Gajhede, M.
登録日2014-05-14
公開日2015-07-22
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.83 Å)
主引用文献Achbp Engineered to Mimic the Alpha4-Alpha4 Binding Pocket in Alpha4Beta2 Nicotinic Acetylcholine Receptors Reveals Interface Specific Interactions Important for Binding and Activity
Mol.Pharmacol., 88, 2015
4UHX
DownloadVisualize
BU of 4uhx by Molmil
Human aldehyde oxidase in complex with phthalazine and thioridazine
分子名称: 10-{2-[(2R)-1-methylpiperidin-2-yl]ethyl}-2-(methylsulfanyl)-10H-phenothiazine, 10-{2-[(2S)-1-methylpiperidin-2-yl]ethyl}-2-(methylsulfanyl)-10H-phenothiazine, ALDEHYDE OXIDASE, ...
著者Coelho, C, Romao, M.J, Santos-Silva, T.
登録日2015-03-26
公開日2015-09-02
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural Insights Into Xenobiotic and Inhibitor Binding to Human Aldehyde Oxidase
Nat.Chem.Biol., 11, 2015
9IFQ
DownloadVisualize
BU of 9ifq by Molmil
Unspecific peroxygenase from Psathyrella aberdarensis (PabUPO-II) in complex with 5-hydroxymethylfurfural
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 5-HYDROXYMETHYL-FURFURAL, GLYCEROL, ...
著者Fernandez-Garcia, A, Sanz-Aparicio, J.
登録日2025-02-18
公開日2025-08-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Unspecific peroxygenase from Psathyrella aberdarensis
To Be Published
6J24
DownloadVisualize
BU of 6j24 by Molmil
Crystal structure of a SAM-dependent methyltransferase LepI in complex with its substrate
分子名称: (3~{S},4'~{R},4'~{a}~{S},6'~{R},8'~{a}~{S})-4',6'-dimethyl-5-phenyl-spiro[1~{H}-pyridine-3,5'-2,3,4,4~{a},6,8~{a}-hexahydro-1~{H}-naphthalene]-2,4-dione, O-methyltransferase, S-ADENOSYLMETHIONINE
著者Qiu, S, Wei, C.
登録日2018-12-30
公開日2019-05-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.244 Å)
主引用文献Deciphering the regulatory and catalytic mechanisms of an unusual SAM-dependent enzyme.
Signal Transduct Target Ther, 4, 2019
6J3P
DownloadVisualize
BU of 6j3p by Molmil
Crystal structure of the human GCN5 bromodomain in complex with compound (R,R)-36n
分子名称: 2-{[(3R,5R)-5-(2,3-dihydro-1,4-benzodioxin-6-yl)-1-methylpiperidin-3-yl]amino}-3-methyl-3,5-dihydro-4H-pyrrolo[3,2-d]pyrimidin-4-one, Histone acetyltransferase KAT2A
著者Huang, L.Y, Li, H, Niu, L, Wu, C.Y, Yu, Y.M, Li, L.L, Yang, S.Y.
登録日2019-01-05
公開日2019-05-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.598 Å)
主引用文献Discovery of Pyrrolo[3,2- d]pyrimidin-4-one Derivatives as a New Class of Potent and Cell-Active Inhibitors of P300/CBP-Associated Factor Bromodomain.
J.Med.Chem., 62, 2019
6J4Q
DownloadVisualize
BU of 6j4q by Molmil
Structural basis of tubulin detyrosination by vasohibins-SVBP enzyme complex and functional implications
分子名称: GLYCEROL, N-[(2S)-4-chloro-3-oxo-1-phenyl-butan-2-yl]-4-methyl-benzenesulfonamide, Small vasohibin-binding protein, ...
著者Wang, N, Bao, H, Huang, H.
登録日2019-01-10
公開日2019-05-01
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural basis of tubulin detyrosination by the vasohibin-SVBP enzyme complex.
Nat.Struct.Mol.Biol., 26, 2019
4UVD
DownloadVisualize
BU of 4uvd by Molmil
Discovery of pyrimidine isoxazoles InhA in complex with compound 6
分子名称: 2-[(4,6-dimethylpyrimidin-2-yl)sulfanyl]-N-[(2Z)-5-[3-(trifluoromethyl)benzyl]-1,3-thiazol-2(3H)-ylidene]acetamide, ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE [NADH], MAGNESIUM ION, ...
著者Read, J.A, Gingell, H, Madhavapeddi, P, Ghorpade, S, Cowan, S.
登録日2014-08-05
公開日2015-09-30
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Hitting the Target in More Than One Way: Novel, Direct Inhibitors of Mycobacterium Tuberculosis Enoyl Acp Reductase
To be Published
1N37
DownloadVisualize
BU of 1n37 by Molmil
NMR Solution Structure of the Anthracycline Respinomycin D Intercalation Complex with a Double Stranded DNA Molecule (AGACGTCT)2
分子名称: 5'-D(*AP*GP*AP*CP*GP*TP*CP*T)-3', RESPINOMYCIN D
著者Maynard, A.J, Williams, H.E.L, Searle, M.S.
登録日2002-10-25
公開日2003-01-28
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献DNA recognition by the Anthracycline Antibiotic Respinomycin D: NMR Structure of the Intercalation Complex with d(AGACGTCT)2
Org.Biomol.Chem., 1, 2003
6IN2
DownloadVisualize
BU of 6in2 by Molmil
Crystal structure of BRD1 in complex with 18-Crown-6
分子名称: 1,4,7,10,13,16-HEXAOXACYCLOOCTADECANE, ACETATE ION, Bromodomain-containing protein 1
著者Yokoyama, T, Kosaka, Y, Matsumoto, K, Kitakami, R, Nabeshima, Y, Mizuguchi, M.
登録日2018-10-24
公開日2019-10-30
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crown Ethers as Transthyretin Amyloidogenesis Inhibitor
To Be Published
6IZQ
DownloadVisualize
BU of 6izq by Molmil
PRMT4 bound with a bicyclic compound
分子名称: (2R)-1-(methylamino)-3-(1,3,4,5-tetrahydro-2-benzazepin-2-yl)propan-2-ol, Histone-arginine methyltransferase CARM1
著者Xiong, B, Cao, D.Y, Guo, Z.H, Li, Y.L, Li, J, Huang, X, Shen, J.K.
登録日2018-12-20
公開日2019-12-25
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.449 Å)
主引用文献Design and Synthesis of Potent, Selective Inhibitors of Protein Arginine Methyltransferase 4 against Acute Myeloid Leukemia.
J.Med.Chem., 62, 2019
6J1T
DownloadVisualize
BU of 6j1t by Molmil
Crystal structure of Candida Antarctica Lipase B mutant SR with product analogue
分子名称: (2S)-2-phenyl-N-[(1R)-1-phenylethyl]propanamide, 1,2-ETHANEDIOL, CHLORIDE ION, ...
著者Cen, Y.X, Zhou, J.H, Wu, Q.
登録日2018-12-29
公開日2020-01-01
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.783 Å)
主引用文献Stereodivergent Protein Engineering of a Lipase To Access All Possible Stereoisomers of Chiral Esters with Two Stereocenters.
J.Am.Chem.Soc., 141, 2019
6IX2
DownloadVisualize
BU of 6ix2 by Molmil
Structure of the A214C/A250I mutant of an epoxide hydrolase from Aspergillus usamii E001 (AuEH2) at 1.48 Angstroms resolution
分子名称: GLYCEROL, Microsomal epoxide hyddrolase
著者Hu, D, Hu, B.C, Hou, X.D, Rao, Y.J, Wu, M.C.
登録日2018-12-09
公開日2019-12-11
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.478 Å)
主引用文献Structure-Guided Regulation in the Enantioselectivity of an Epoxide Hydrolase to Produce Enantiomeric Monosubstituted Epoxides and Vicinal Diols via Kinetic Resolution.
Org.Lett., 24, 2022
4W6Z
DownloadVisualize
BU of 4w6z by Molmil
YEAST ALCOHOL DEHYDROGENASE I, SACCHAROMYCES CEREVISIAE FERMENTATIVE ENZYME
分子名称: Alcohol dehydrogenase 1, NICOTINAMIDE-8-IODO-ADENINE-DINUCLEOTIDE, TRIFLUOROETHANOL, ...
著者plapp, B.v, savarimuthu, b.r, ramaswamy, s.
登録日2014-08-21
公開日2014-09-03
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Yeast alcohol dehydrogenase structure and catalysis.
Biochemistry, 53, 2014

243083

件を2025-10-15に公開中

PDB statisticsPDBj update infoContact PDBjnumon