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2W99
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Crystal Structure of CDK4 in complex with a D-type cyclin
分子名称: CELL DIVISION PROTEIN KINASE 4, G1/S-SPECIFIC CYCLIN-D1
著者Day, P.J, Cleasby, A, Tickle, I.J, Reilly, M.O, Coyle, J.E, Holding, F.P, McMenamin, R.L, Yon, J, Chopra, R, Lengauer, C, Jhoti, H.
登録日2009-01-22
公開日2009-03-10
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal Structure of Human Cdk4 in Complex with a D-Type Cyclin.
Proc.Natl.Acad.Sci.USA, 106, 2009
8I8S
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Crystal structure of human MTH1(G2K mutant) in complex with 8-oxo-dGMP and Mn2+
分子名称: 7,8-dihydro-8-oxoguanine triphosphatase, 8-OXO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE, MANGANESE (II) ION
著者Nakamura, T, Yamagata, Y.
登録日2023-02-05
公開日2023-03-22
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Protonation states of Asp residues in the human Nudix hydrolase MTH1 contribute to its broad substrate recognition.
Febs Lett., 597, 2023
2VP5
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Structural Studies of Nucleoside Analog and Feedback Inhibitor Binding to Drosophila Melanogaster Multisubstrate Deoxyribonucleoside Kinase
分子名称: 2'-DEOXYCYTIDINE, DEOXYNUCLEOSIDE KINASE, SULFATE ION
著者Mikkelsen, N.E, Munch-Petersen, B, Eklund, H.
登録日2008-02-26
公開日2008-04-18
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural Studies of Nucleoside Analog and Feedback Inhibitor Binding to Drosophila Melanogaster Multisubstrate Deoxyribonucleoside Kinase.
FEBS J., 275, 2008
7ZSD
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cryo-EM structure of omicron spike in complex with de novo designed binder, local
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, de novo designed binder
著者Pablo, G, Sarah, W, Alexandra, V.H, Anthony, M, Andreas, S, Zander, H, Dongchun, N, Shuguang, T, Freyr, S, Casper, G, Priscilla, T, Alexandra, T, Stephane, R, Sandrine, G, Jane, M, Aaron, P, Zepeng, X, Yan, C, Pu, H, George, G, Elisa, O, Beat, F, Didier, T, Henning, S, Michael, B, Bruno, E.C.
登録日2022-05-06
公開日2023-03-01
最終更新日2023-05-24
実験手法ELECTRON MICROSCOPY (3.29 Å)
主引用文献De novo design of protein interactions with learned surface fingerprints.
Nature, 617, 2023
7ZSS
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cryo-EM structure of D614 spike in complex with de novo designed binder
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
著者Pablo, G, Sarah, W, Alexandra, V.H, Anthony, M, Andreas, S, Zander, H, Dongchun, N, Shuguang, T, Freyr, S, Casper, G, Priscilla, T, Alexandra, T, Stephane, R, Sandrine, G, Jane, M, Aaron, P, Zepeng, X, Yan, C, Pu, H, George, G, Elisa, O, Beat, F, Didier, T, Henning, S, Michael, B, Bruno, E.C.
登録日2022-05-08
公開日2023-03-01
最終更新日2023-05-24
実験手法ELECTRON MICROSCOPY (2.63 Å)
主引用文献De novo design of protein interactions with learned surface fingerprints.
Nature, 617, 2023
7SZI
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Cryo-EM structure of OmpK36-TraN mating pair stabilization proteins from carbapenem-resistant Klebsiella pneumoniae
分子名称: OmpK36, TraN
著者Beltran, L.C, Seddon, C, Beis, K, Frankel, G, Egelman, E.H.
登録日2021-11-27
公開日2022-06-08
最終更新日2022-07-13
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Mating pair stabilization mediates bacterial conjugation species specificity.
Nat Microbiol, 7, 2022
8IBQ
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Bromodomain and Extra-terminal Domain (BET) BRD4
分子名称: 7-[2-fluoranyl-3-(1,3,5-trimethylpyrazol-4-yl)phenyl]-1~{H}-imidazo[4,5-b]pyridine, Bromodomain-containing protein 4
著者Cao, D, Zhiyan, D, Xiong, B.
登録日2023-02-10
公開日2023-10-04
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Discovery of 1 H -Imidazo[4,5- b ]pyridine Derivatives as Potent and Selective BET Inhibitors for the Management of Neuropathic Pain.
J.Med.Chem., 66, 2023
8IDH
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Bromodomain and Extra-terminal Domain (BET) BRD4
分子名称: 7-[2-fluoranyl-3-(1,3,5-trimethylpyrazol-4-yl)phenyl]-1~{H}-imidazo[4,5-b]pyridine, Bromodomain-containing protein 4
著者Cao, D, Zhiyan, D, Xiong, B.
登録日2023-02-13
公開日2023-10-04
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Discovery of 1 H -Imidazo[4,5- b ]pyridine Derivatives as Potent and Selective BET Inhibitors for the Management of Neuropathic Pain.
J.Med.Chem., 66, 2023
2W96
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Crystal Structure of CDK4 in complex with a D-type cyclin
分子名称: CELL DIVISION PROTEIN KINASE 4, G1/S-SPECIFIC CYCLIN-D1, GLYCEROL
著者Day, P.J, Cleasby, A, Tickle, I.J, Reilly, M.O, Coyle, J.E, Holding, F.P, McMenamin, R.L, Yon, J, Chopra, R, Lengauer, C, Jhoti, H.
登録日2009-01-21
公開日2009-03-10
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure of Human Cdk4 in Complex with a D-Type Cyclin.
Proc.Natl.Acad.Sci.USA, 106, 2009
7EZY
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anti-CRISPR-associated Aca2
分子名称: anti-CRISPR-associated Aca2
著者Lee, S.Y, Park, H.H.
登録日2021-06-02
公開日2022-01-12
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Molecular basis of transcriptional repression ofanti-CRISPR by anti-CRISPR-associated 2
Acta Crystallogr.,Sect.D, 78, 2022
2VUG
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The structure of an archaeal homodimeric RNA ligase
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, PAB1020, ...
著者Brooks, M.A, Meslet-Cladiere, L, Graille, M, Kuhn, J, Blondeau, K, Myllykallio, H, van Tilbeurgh, H.
登録日2008-05-26
公開日2008-06-03
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献The structure of an archaeal homodimeric ligase which has RNA circularization activity.
Protein Sci., 17, 2008
8A50
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Crystal structure of HSF2BP-ALPHA1 tetramer
分子名称: Heat shock factor 2-binding protein, PHOSPHATE ION
著者Miron, S, Legrand, P, Ropars, V, Ghouil, R, Zinn-Justin, S.
登録日2022-06-13
公開日2023-07-05
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.484 Å)
主引用文献BRCA2-HSF2BP oligomeric ring disassembly by BRME1 promotes homologous recombination.
Sci Adv, 9, 2023
8A51
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Crystal structure of HSF2BP-BRME1 complex
分子名称: 1,2-ETHANEDIOL, Break repair meiotic recombinase recruitment factor 1, CHLORIDE ION, ...
著者Miron, S, Legrand, P, Ropars, V, Ghouil, R, Zinn-Justin, S.
登録日2022-06-13
公開日2023-07-05
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献BRCA2-HSF2BP oligomeric ring disassembly by BRME1 promotes homologous recombination.
Sci Adv, 9, 2023
2MUQ
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Solution Structure of the Human FAAP20 UBZ
分子名称: Fanconi anemia-associated protein of 20 kDa, ZINC ION
著者Wojtaszek, J.L, Wang, S, Zhou, P.
登録日2014-09-16
公開日2014-12-03
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Ubiquitin recognition by FAAP20 expands the complex interface beyond the canonical UBZ domain.
Nucleic Acids Res., 42, 2014
7ERQ
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The regulatory domain of YeiE, a sulfite sensing LysR-type transcriptional regulator from Cronobacter sakazakii (ligand-free form)
分子名称: LysR family transcriptional regulator
著者Hong, S, Ha, N.-C.
登録日2021-05-06
公開日2022-03-23
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structures of YeiE from Cronobacter sakazakii and the role of sulfite tolerance in gram-negative bacteria.
Proc.Natl.Acad.Sci.USA, 119, 2022
7ERP
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BU of 7erp by Molmil
The regulatory domain of YeiE, a sulfite sensing LysR-type transcriptional regulator from Cronobacter sakazakii (sulfite-bound form)
分子名称: LysR family transcriptional regulator, SULFITE ION
著者Hong, S, Ha, N.-C.
登録日2021-05-06
公開日2022-03-23
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Crystal structures of YeiE from Cronobacter sakazakii and the role of sulfite tolerance in gram-negative bacteria.
Proc.Natl.Acad.Sci.USA, 119, 2022
333D
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BU of 333d by Molmil
THE CRYSTAL STRUCTURE OF AN RNA OLIGOMER INCORPORATING TANDEM ADENOSINE-INOSINE MISMATCHES
分子名称: CALCIUM ION, RNA (5'-R(*CP*GP*CP*AP*IP*GP*CP*G)-3')
著者Carter, R.J, Baeyens, K.J, SantaLucia Jr, J, Turner, D.H, Holbrook, S.R.
登録日1997-05-20
公開日1997-10-16
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.52 Å)
主引用文献The crystal structure of an RNA oligomer incorporating tandem adenosine-inosine mismatches.
Nucleic Acids Res., 25, 1997
7FDF
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The E145S mutant of the regulatory domain of YeiE, a sulfite sensing LysR-type transcriptional regulator from Cronobacter sakazakii (sulfate-bound form)
分子名称: LysR family transcriptional regulator, SULFATE ION
著者Hong, S, Ha, N.-C.
登録日2021-07-16
公開日2022-03-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Crystal structures of YeiE from Cronobacter sakazakii and the role of sulfite tolerance in gram-negative bacteria.
Proc.Natl.Acad.Sci.USA, 119, 2022
8A8F
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Crystal structure of Glc7 phosphatase in complex with the regulatory region of Ref2
分子名称: MANGANESE (II) ION, PHOSPHATE ION, RNA end formation protein 2, ...
著者Carminati, M, Manav, C.M, Bellini, D, Passmore, L.A.
登録日2022-06-22
公開日2023-11-29
最終更新日2024-06-12
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献A direct interaction between CPF and RNA Pol II links RNA 3' end processing to transcription.
Mol.Cell, 83, 2023
8AH2
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Crystal structure of human 14-3-3 zeta fused to the NPM1 peptide including phosphoserine-48
分子名称: 14-3-3 protein zeta/delta,Nucleophosmin
著者Boyko, K.M, Kapitonova, A.A, Tugaeva, K.V, Varfolomeeva, L.A, Sluchanko, N.N.
登録日2022-07-20
公開日2022-09-14
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural basis for the recognition by 14-3-3 proteins of a conditional binding site within the oligomerization domain of human nucleophosmin.
Biochem.Biophys.Res.Commun., 627, 2022
301D
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CAPTURING THE STRUCTURE OF A CATALYTIC RNA INTERMEDIATE: RNA HAMMERHEAD RIBOZYME, MG(II)-SOAKED
分子名称: MAGNESIUM ION, RNA HAMMERHEAD RIBOZYME
著者Scott, W.G, Murray, J.B, Arnold, J.R.P, Stoddard, B.L, Klug, A.
登録日1996-12-14
公開日1997-01-24
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Capturing the structure of a catalytic RNA intermediate: the hammerhead ribozyme.
Science, 274, 1996
1U04
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Crystal structure of full length Argonaute from Pyrococcus furiosus
分子名称: hypothetical protein PF0537
著者Song, J.J, Smith, S.K, Hannon, G.J, Joshua-Tor, L.
登録日2004-07-12
公開日2004-08-17
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystal Structure of Argonaute and Its Implications for RISC Slicer Activity
Science, 305, 2004
2MUR
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Solution Structure of the Human FAAP20 UBZ-Ubiquitin Complex
分子名称: Fanconi anemia-associated protein of 20 kDa, Ubiquitin, ZINC ION
著者Wang, S, Wojtaszek, J.L, Zhou, P.
登録日2014-09-16
公開日2014-12-03
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Ubiquitin recognition by FAAP20 expands the complex interface beyond the canonical UBZ domain.
Nucleic Acids Res., 42, 2014
2ZZA
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Moritella profunda Dihydrofolate reductase complex with NADP+ and Folate
分子名称: Dihydrofolate reductase, FOLIC ACID, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
著者Hata, K, Tanaka, T, Murakami, C, Ohmae, E, Gekko, K, Shiro, Y, Akasaka, K.
登録日2009-02-06
公開日2010-02-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Moritella profunda Dihydrofolate reductase complex with NADP+ and Folate
To be Published
7TGQ
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Zinc finger antiviral protein (ZAP) central domain bound to ADP-ribose
分子名称: ACETATE ION, ADENOSINE-5-DIPHOSPHORIBOSE, ZINC ION, ...
著者Pornillos, O.P.
登録日2022-01-09
公開日2022-02-02
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Poly(ADP-ribose) potentiates ZAP antiviral activity.
Plos Pathog., 18, 2022

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