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PDB: 110 results

4EBR
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BU of 4ebr by Molmil
Crystal structure of Autophagic E2, Atg10
Descriptor: MERCURY (II) ION, Ubiquitin-like-conjugating enzyme ATG10
Authors:Hong, S.B, Kim, B.W, Kim, J.H, Song, H.K.
Deposit date:2012-03-24
Release date:2012-10-03
Last modified:2013-07-24
Method:X-RAY DIFFRACTION (2.701 Å)
Cite:Structure of the autophagic E2 enzyme Atg10
Acta Crystallogr.,Sect.D, 68, 2012
7ERQ
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BU of 7erq by Molmil
The regulatory domain of YeiE, a sulfite sensing LysR-type transcriptional regulator from Cronobacter sakazakii (ligand-free form)
Descriptor: LysR family transcriptional regulator
Authors:Hong, S, Ha, N.-C.
Deposit date:2021-05-06
Release date:2022-03-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structures of YeiE from Cronobacter sakazakii and the role of sulfite tolerance in gram-negative bacteria.
Proc.Natl.Acad.Sci.USA, 119, 2022
3RUI
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BU of 3rui by Molmil
Crystal structure of Atg7C-Atg8 complex
Descriptor: Autophagy-related protein 8, Ubiquitin-like modifier-activating enzyme ATG7, ZINC ION
Authors:Hong, S.B, Kim, B.W, Song, H.K.
Deposit date:2011-05-05
Release date:2011-11-23
Last modified:2013-07-03
Method:X-RAY DIFFRACTION (1.906 Å)
Cite:Insights into noncanonical E1 enzyme activation from the structure of autophagic E1 Atg7 with Atg8.
Nat.Struct.Mol.Biol., 18, 2011
3IM9
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BU of 3im9 by Molmil
Crystal structure of MCAT from Staphylococcus aureus
Descriptor: ACETATE ION, CALCIUM ION, Malonyl CoA-acyl carrier protein transacylase, ...
Authors:Hong, S.K, Kim, K.H, Park, J.K, Kim, Y.M, Kim, E.E.
Deposit date:2009-08-10
Release date:2010-06-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:New design platform for malonyl-CoA-acyl carrier protein transacylase
Febs Lett., 584, 2010
5JIA
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BU of 5jia by Molmil
The Crystal Structure Of IUS-SPRY Domain From RanBP10
Descriptor: IMIDAZOLE, Ran-binding protein 10
Authors:Hong, S.K, Kim, K.-H, Kim, E.E.
Deposit date:2016-04-22
Release date:2016-11-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Basis for the Interaction between the IUS-SPRY Domain of RanBPM and DDX-4 in Germ Cell Development.
J.Mol.Biol., 428, 2016
7FDF
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BU of 7fdf by Molmil
The E145S mutant of the regulatory domain of YeiE, a sulfite sensing LysR-type transcriptional regulator from Cronobacter sakazakii (sulfate-bound form)
Descriptor: LysR family transcriptional regulator, SULFATE ION
Authors:Hong, S, Ha, N.-C.
Deposit date:2021-07-16
Release date:2022-03-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structures of YeiE from Cronobacter sakazakii and the role of sulfite tolerance in gram-negative bacteria.
Proc.Natl.Acad.Sci.USA, 119, 2022
7ERP
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BU of 7erp by Molmil
The regulatory domain of YeiE, a sulfite sensing LysR-type transcriptional regulator from Cronobacter sakazakii (sulfite-bound form)
Descriptor: LysR family transcriptional regulator, SULFITE ION
Authors:Hong, S, Ha, N.-C.
Deposit date:2021-05-06
Release date:2022-03-23
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Crystal structures of YeiE from Cronobacter sakazakii and the role of sulfite tolerance in gram-negative bacteria.
Proc.Natl.Acad.Sci.USA, 119, 2022
3RUJ
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BU of 3ruj by Molmil
Crystal Structure of N-terminal region of yeast Atg7
Descriptor: Ubiquitin-like modifier-activating enzyme ATG7
Authors:Hong, S.B, Kim, B.W, Song, H.K.
Deposit date:2011-05-05
Release date:2011-11-23
Last modified:2013-07-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Insights into noncanonical E1 enzyme activation from the structure of autophagic E1 Atg7 with Atg8.
Nat.Struct.Mol.Biol., 18, 2011
3IM8
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BU of 3im8 by Molmil
Crystal structure of MCAT from Streptococcus pneumoniae
Descriptor: ACETATE ION, Malonyl acyl carrier protein transacylase
Authors:Hong, S.K, Kim, K.H, Park, J.K, Kim, Y.M, Kim, E.E.
Deposit date:2009-08-10
Release date:2010-06-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:New design platform for malonyl-CoA-acyl carrier protein transacylase
Febs Lett., 584, 2010
5JI7
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BU of 5ji7 by Molmil
The Crystal Structure Of IUS-SPRY Domain From RanBPM/9
Descriptor: Ran-binding protein 9
Authors:Hong, S.K, Kim, K.-H, Kim, E.E.
Deposit date:2016-04-22
Release date:2016-11-09
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Structural Basis for the Interaction between the IUS-SPRY Domain of RanBPM and DDX-4 in Germ Cell Development.
J.Mol.Biol., 428, 2016
5JI9
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BU of 5ji9 by Molmil
The Crystal Structure Of IUS-SPRY Domain From RanBPM/9
Descriptor: Ran-binding protein 9
Authors:Hong, S.K, Kim, K.-H, Kim, E.E.
Deposit date:2016-04-22
Release date:2016-11-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Basis for the Interaction between the IUS-SPRY Domain of RanBPM and DDX-4 in Germ Cell Development.
J.Mol.Biol., 428, 2016
5JIU
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BU of 5jiu by Molmil
The crystal structure of RanBPM/9 IUS-SPRY domain in complex with DDX-4 peptide
Descriptor: CHLORIDE ION, Probable ATP-dependent RNA helicase DDX4, Ran-binding protein 9
Authors:Hong, S.K, Kim, K.-H, Kim, E.E.
Deposit date:2016-04-22
Release date:2016-11-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.054 Å)
Cite:Structural Basis for the Interaction between the IUS-SPRY Domain of RanBPM and DDX-4 in Germ Cell Development.
J.Mol.Biol., 428, 2016
5VPP
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BU of 5vpp by Molmil
The 70S P-site tRNA SufA6 complex
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Hong, S, Sunita, S, Dunkle, J.A, Maehigashi, T, Dunham, C.M.
Deposit date:2017-05-05
Release date:2018-09-26
Last modified:2018-11-07
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Mechanism of tRNA-mediated +1 ribosomal frameshifting.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5VPO
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BU of 5vpo by Molmil
The 70S P-site ASL SufA6 complex
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Hong, S, Sunita, S, Dunkle, J.A, Maehigashi, T, Dunham, C.M.
Deposit date:2017-05-05
Release date:2018-09-26
Last modified:2018-11-07
Method:X-RAY DIFFRACTION (3.34 Å)
Cite:Mechanism of tRNA-mediated +1 ribosomal frameshifting.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5SZX
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BU of 5szx by Molmil
Epstein-Barr virus Zta DNA binding domain homodimer in complex with methylated DNA
Descriptor: DNA (5'-D(*AP*AP*GP*CP*AP*CP*TP*GP*AP*GP*(5CM)P*GP*AP*TP*GP*AP*AP*G)-3'), DNA (5'-D(*TP*CP*TP*TP*CP*AP*TP*(5CM)P*GP*CP*TP*CP*AP*GP*TP*GP*CP*T)-3'), PHOSPHATE ION, ...
Authors:Hong, S, Horton, J.R, Cheng, X.
Deposit date:2016-08-15
Release date:2017-03-01
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.251 Å)
Cite:Methyl-dependent and spatial-specific DNA recognition by the orthologous transcription factors human AP-1 and Epstein-Barr virus Zta.
Nucleic Acids Res., 45, 2017
5T01
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BU of 5t01 by Molmil
Human c-Jun DNA binding domain homodimer in complex with methylated DNA
Descriptor: DNA (5'-D(*AP*AP*TP*GP*GP*AP*(5CM)P*GP*AP*GP*TP*CP*AP*TP*AP*GP*GP*AP*G)-3'), DNA (5'-D(P*CP*TP*CP*CP*TP*AP*TP*GP*AP*CP*TP*CP*GP*TP*CP*CP*AP*T)-3'), Transcription factor AP-1
Authors:Hong, S, Horton, J.R, Cheng, X.
Deposit date:2016-08-15
Release date:2017-03-01
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Methyl-dependent and spatial-specific DNA recognition by the orthologous transcription factors human AP-1 and Epstein-Barr virus Zta.
Nucleic Acids Res., 45, 2017
5Z8A
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BU of 5z8a by Molmil
Crystal structure of GenB1 from Micromonospora echinospora in complex with JI-20A and PLP (external aldimine)
Descriptor: (2~{R},3~{R},4~{R},5~{R})-2-[(1~{S},2~{S},3~{R},4~{S},6~{R})-3-[(2~{R},3~{R},4~{R},5~{S},6~{R})-6-(aminomethyl)-3-azany l-4,5-bis(oxidanyl)oxan-2-yl]oxy-4,6-bis(azanyl)-2-oxidanyl-cyclohexyl]oxy-5-methyl-4-(methylamino)oxane-3,5-diol, C-6' aminotransferase, PYRIDOXAL-5'-PHOSPHATE
Authors:Hong, S.K, Cha, S.S.
Deposit date:2018-01-31
Release date:2019-01-16
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.398 Å)
Cite:Complete reconstitution of the diverse pathways of gentamicin B biosynthesis.
Nat. Chem. Biol., 15, 2019
5Z83
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BU of 5z83 by Molmil
Crystal structure of GenB1 from Micromonospora echinospora in complex with PLP (internal aldimine)
Descriptor: C-6' aminotransferase, MAGNESIUM ION, PYRIDOXAL-5'-PHOSPHATE
Authors:Hong, S.K, Cha, S.S.
Deposit date:2018-01-30
Release date:2019-01-16
Last modified:2019-02-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Complete reconstitution of the diverse pathways of gentamicin B biosynthesis.
Nat. Chem. Biol., 15, 2019
5Z8K
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BU of 5z8k by Molmil
Crystal structure of an aminotransferase in complex with product-1
Descriptor: (1R,2R,3S,4R,6S)-4,6-diamino-2,3-dihydroxycyclohexyl 2,6-diamino-2,6-dideoxy-alpha-D-glucopyranoside, C-6' aminotransferase, PYRIDOXAL-5'-PHOSPHATE
Authors:Hong, S.K, Cha, S.S.
Deposit date:2018-01-31
Release date:2019-01-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.759 Å)
Cite:Complete reconstitution of the diverse pathways of gentamicin B biosynthesis.
Nat. Chem. Biol., 15, 2019
6K22
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BU of 6k22 by Molmil
Crystal structure of Ca-bound human Annexin A5 in low salt condition
Descriptor: Annexin A5, CALCIUM ION
Authors:Hong, S, Ha, N.-C.
Deposit date:2019-05-13
Release date:2020-03-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.747 Å)
Cite:High-resolution structures of annexin A5 in a two-dimensional array.
J.Struct.Biol., 209, 2020
6K25
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BU of 6k25 by Molmil
Crystal structure of Ca-unbound human Annexin A5 in low salt condition
Descriptor: Annexin A5
Authors:Hong, S, Ha, N.-C.
Deposit date:2019-05-13
Release date:2020-03-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.401 Å)
Cite:High-resolution structures of annexin A5 in a two-dimensional array.
J.Struct.Biol., 209, 2020
6AKV
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BU of 6akv by Molmil
Crystal structure of LysB4, the endolysin from Bacillus cereus-targeting bacteriophage B4
Descriptor: CHLORIDE ION, LysB4, SULFATE ION, ...
Authors:Hong, S, Ha, N.-C.
Deposit date:2018-09-03
Release date:2019-02-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of LysB4, an Endolysin fromBacillus cereus-Targeting Bacteriophage B4.
Mol. Cells, 42, 2019
7E1H
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BU of 7e1h by Molmil
crystal structure of RD-BEF
Descriptor: BERYLLIUM TRIFLUORIDE ION, DNA-binding response regulator, MAGNESIUM ION
Authors:Hong, S, Zhang, X, Zhang, P.
Deposit date:2021-02-01
Release date:2022-02-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.805 Å)
Cite:Structural basis of phosphorylation-induced activation of the response regulator VbrR.
Acta Biochim.Biophys.Sin., 2023
5YHR
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BU of 5yhr by Molmil
Crystal structure of the anti-CRISPR protein, AcrF2
Descriptor: Anti-CRISPR protein 30, CALCIUM ION
Authors:Hong, S, Ka, D, Bae, E.
Deposit date:2017-09-29
Release date:2018-02-07
Last modified:2019-02-20
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:CRISPR RNA and anti-CRISPR protein binding to theXanthomonas albilineansCsy1-Csy2 heterodimer in the type I-F CRISPR-Cas system
J. Biol. Chem., 293, 2018
7E1B
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BU of 7e1b by Molmil
Crystal structure of VbrR-DNA complex
Descriptor: DNA (26-MER), DNA-binding response regulator
Authors:Hong, S, Zhang, X, Zhang, P.
Deposit date:2021-02-01
Release date:2022-02-09
Last modified:2023-02-15
Method:X-RAY DIFFRACTION (4.587 Å)
Cite:Structural basis of phosphorylation-induced activation of the response regulator VbrR.
Acta Biochim.Biophys.Sin., 2023

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