Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8TXL
DownloadVisualize
BU of 8txl by Molmil
Nan Regulatory Protein full length mutant R148A
分子名称: 1,2-ETHANEDIOL, ACETATE ION, CHLORIDE ION, ...
著者Wood, D.M, Horne, C.R, Dobson, R.C.J.
登録日2023-08-23
公開日2024-09-11
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Structure of isomerase domain of the nan-regulatory protein (NanR) from Streptococcus pneumoniae
To Be Published
5CQG
DownloadVisualize
BU of 5cqg by Molmil
Structure of Tribolium telomerase in complex with the highly specific inhibitor BIBR1532
分子名称: 2-{[(2E)-3-(naphthalen-2-yl)but-2-enoyl]amino}benzoic acid, Telomerase reverse transcriptase
著者Bryan, C, Rice, C, Hoffman, H, Harkisheimer, M, Sweeney, M, Skordalakes, E.
登録日2015-07-21
公開日2015-09-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural Basis of Telomerase Inhibition by the Highly Specific BIBR1532.
Structure, 23, 2015
4Z4K
DownloadVisualize
BU of 4z4k by Molmil
Crystal structure of GFP-TAX1BP1 UBZ1+2 domain fusion protein
分子名称: Green fluorescent protein,Tax1-binding protein 1, ZINC ION
著者Rohaim, A, Kawasaki, M, Wakatsuki, S.
登録日2015-04-02
公開日2016-04-06
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献A novel mode of ubiquitin recognition by the ubiquitin-binding zinc finger domain of WRNIP1.
Febs J., 283, 2016
5YLT
DownloadVisualize
BU of 5ylt by Molmil
Crystal structure of SET7/9 in complex with a cyproheptadine derivative
分子名称: 2-(1-methylpiperidin-4-ylidene)tricyclo[9.4.0.0^{3,8}]pentadeca-1(11),3(8),4,6,9,12,14-heptaen-6-ol, GLYCEROL, Histone-lysine N-methyltransferase SETD7, ...
著者Hirano, T, Fujiwara, T, Niwa, H, Hirano, M, Ohira, K, Okazaki, Y, Sato, S, Umehara, T, Maemoto, Y, Ito, A, Yoshida, M, Kagechika, H.
登録日2017-10-19
公開日2018-06-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Development of Novel Inhibitors for Histone Methyltransferase SET7/9 based on Cyproheptadine.
ChemMedChem, 13, 2018
7VDQ
DownloadVisualize
BU of 7vdq by Molmil
The structure of cyclin-dependent kinase 5 (CDK5) in complex with p25 and Compound 7
分子名称: 2-[[7-[[2-fluoranyl-4-[3-(hydroxymethyl)pyrazol-1-yl]phenyl]amino]-1,6-naphthyridin-2-yl]-(1-methylpiperidin-4-yl)amino]ethanoic acid, Cyclin-dependent kinase 5 activator 1, p25, ...
著者Malojcic, G, Clugston, S.L, Daniels, M, Harmange, J.C, Ledeborer, M.
登録日2021-09-07
公開日2022-03-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.91 Å)
主引用文献Discovery and Optimization of Highly Selective Inhibitors of CDK5.
J.Med.Chem., 65, 2022
7VDS
DownloadVisualize
BU of 7vds by Molmil
The structure of cyclin-dependent kinase 5 (CDK5) in complex with p25 and Compound 24
分子名称: 1,2-ETHANEDIOL, 5-fluoranyl-4-[[2-[(1R)-1-(1-methylpiperidin-4-yl)-1-oxidanyl-ethyl]-1,6-naphthyridin-7-yl]amino]-2-morpholin-4-yl-benzenecarbonitrile, CHLORIDE ION, ...
著者Malojcic, G, Clugston, S.L, Daniels, M, Harmange, J.C, Ledeborer, M.
登録日2021-09-07
公開日2022-03-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献Discovery and Optimization of Highly Selective Inhibitors of CDK5.
J.Med.Chem., 65, 2022
5Y3D
DownloadVisualize
BU of 5y3d by Molmil
Structural insight into the interaction between RNA polymerase and VPg for norovirus replication
分子名称: RNA-dependent RNA polymerase, viral protein genome-linked (VPg)
著者Kim, K.H, Lee, J.-H, Seok, J.H.
登録日2017-07-28
公開日2018-07-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.14 Å)
主引用文献Insight Into the Interaction Between RNA Polymerase and VPg for Murine Norovirus Replication.
Front Microbiol, 9, 2018
5YQG
DownloadVisualize
BU of 5yqg by Molmil
The structure of 14-3-3 and pNumb peptide
分子名称: 14-3-3 protein eta, Peptide from Protein numb homolog
著者Chen, X, Liu, Z, Wen, W.
登録日2017-11-06
公開日2018-02-07
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural determinants controlling 14-3-3 recruitment to the endocytic adaptor Numb and dissociation of the Numb/alpha-adaptin complex.
J. Biol. Chem., 293, 2018
5Y7W
DownloadVisualize
BU of 5y7w by Molmil
Crystal structure of the Nco-A1 PAS-B domain with YL-2
分子名称: Nuclear receptor coactivator 1, YL-2 peptide
著者Lee, Y.J, Yoon, H.S, Lee, J.H, Bae, J.H, Song, J.Y, Lim, H.S.
登録日2017-08-18
公開日2017-11-15
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Targeted Inhibition of the NCOA1/STAT6 Protein-Protein Interaction
J. Am. Chem. Soc., 139, 2017
6PYT
DownloadVisualize
BU of 6pyt by Molmil
CryoEM Structure of Pyocin R2 - precontracted - trunk
分子名称: Pyocin sheath PA0622, Pyocin tube PA0623
著者Ge, P, Avaylon, J, Scholl, D, Shneider, M.M, Browning, C, Buth, S.A, Plattner, M, Ding, K, Leiman, P.G, Miller, J.F, Zhou, Z.H.
登録日2019-07-30
公開日2020-04-15
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Action of a minimal contractile bactericidal nanomachine.
Nature, 580, 2020
4Z4M
DownloadVisualize
BU of 4z4m by Molmil
Crystal structure of GFP-TAX1BP1 UBZ2 domain fusion protein
分子名称: Green fluorescent protein,Tax1-binding protein 1, ZINC ION
著者Rohaim, A, Kawasaki, M, Wakatsuki, S.
登録日2015-04-02
公開日2016-04-06
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献A novel mode of ubiquitin recognition by the ubiquitin-binding zinc finger domain of WRNIP1.
Febs J., 283, 2016
1ZGY
DownloadVisualize
BU of 1zgy by Molmil
Structural and Biochemical Basis for Selective Repression of the Orphan Nuclear Receptor LRH-1 by SHP
分子名称: 2,4-THIAZOLIDIINEDIONE, 5-[[4-[2-(METHYL-2-PYRIDINYLAMINO)ETHOXY]PHENYL]METHYL]-(9CL), Nuclear receptor subfamily 0, ...
著者Li, Y, Choi, M, Suino, K, Kovach, A, Daugherty, J, Kliewer, S.A, Xu, H.E.
登録日2005-04-22
公開日2005-07-26
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural and biochemical basis for selective repression of the orphan nuclear receptor liver receptor homolog 1 by small heterodimer partner.
Proc.Natl.Acad.Sci.Usa, 102, 2005
8G6R
DownloadVisualize
BU of 8g6r by Molmil
Porcine epidemic diarrhea virus core polymerase complex
分子名称: RNA (5'-R(P*AP*AP*GP*AP*AP*GP*CP*UP*AP*UP*UP*AP*AP*AP*AP*UP*CP*AP*CP*A)-3'), RNA (5'-R(P*GP*GP*UP*UP*GP*UP*GP*AP*UP*UP*UP*UP*AP*AP*UP*AP*GP*CP*UP*U)-3'), ZINC ION, ...
著者Anderson, T.K, Kirchdoerfer, R.N.
登録日2023-02-15
公開日2023-03-29
最終更新日2023-10-04
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献An alphacoronavirus polymerase structure reveals conserved co-factor functions.
Biorxiv, 2023
8PTG
DownloadVisualize
BU of 8ptg by Molmil
Structure of the transcription termination factor Rho bound to RNA at the PBS and SBS
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, ...
著者Said, N, Hilal, T, Wahl, M.C.
登録日2023-07-14
公開日2024-04-17
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Sm-like protein Rof inhibits transcription termination factor rho by binding site obstruction and conformational insulation.
Nat Commun, 15, 2024
7BY1
DownloadVisualize
BU of 7by1 by Molmil
Crystal structure of GCN5 PCAF N-terminal domain
分子名称: Histone acetyltransferase KAT2A, ZINC ION
著者Hibi, R, Toma-Fukai, S, Shimizu, T.
登録日2020-04-21
公開日2020-08-26
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of GCN5 PCAF N-terminal domain reveals atypical ubiquitin ligase structure.
J.Biol.Chem., 295, 2020
3VJI
DownloadVisualize
BU of 3vji by Molmil
Human PPAR gamma ligand binding domain in complex with JKPL53
分子名称: (2S)-2-{4-butoxy-3-[({4-[(3S,5S,7S)-tricyclo[3.3.1.1~3,7~]dec-1-yl]benzoyl}amino)methyl]benzyl}butanoic acid, Peroxisome proliferator-activated receptor gamma
著者Tomioka, D, Kuwabara, N, Hashimoto, H, Sato, M, Shimizu, T.
登録日2011-10-20
公開日2012-08-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Peroxisome proliferator-activated receptors (PPARs) have multiple binding points that accommodate ligands in various conformations: phenylpropanoic acid-type PPAR ligands bind to PPAR in different conformations, depending on the subtype.
J.Med.Chem., 55, 2012
6X0A
DownloadVisualize
BU of 6x0a by Molmil
X-ray structure of a chimeric ParDE toxin-antitoxin complex from Mesorhizobium opportunistum
分子名称: 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE, Plasmid stabilization system, Putative addiction module antidote protein, ...
著者Lite, T.L, Grant, R.A, Laub, M.T.
登録日2020-05-15
公開日2020-11-25
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Uncovering the basis of protein-protein interaction specificity with a combinatorially complete library.
Elife, 9, 2020
6Q6F
DownloadVisualize
BU of 6q6f by Molmil
Crystal structure of IDH1 R132H in complex with HMS101
分子名称: (2~{R})-2-[2-[(3~{R})-3-(4-fluorophenyl)pyrrolidin-1-yl]ethyl]-1,4-dimethyl-piperazine, Isocitrate dehydrogenase [NADP] cytoplasmic
著者Chaturvedi, A, Goparaju, R, Gupta, C, Kluenemann, T, Araujo Cruz, M.M, Kloos, A, Goerlich, K, Schottmann, R, Struys, E.A, Ganser, A, Preller, M, Heuser, M.
登録日2018-12-10
公開日2019-10-16
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献In vivo efficacy of mutant IDH1 inhibitor HMS-101 and structural resolution of distinct binding site.
Leukemia, 34, 2020
7BFX
DownloadVisualize
BU of 7bfx by Molmil
deoxyxylose nucleic acid hairpin
分子名称: dXyNA (5'-D(*(XA)P*(XG)P*(XC)P*(XA)P*(XA)P*(XT)P*(XC)P*(XC)P*(XC)P*(XC)P*(XC)P*(XC)P*(XG)P*(XG)P*(XA)P*(XT)P*(XT)P*(XG)P*(XC)P*T)-3')
著者Mattelaer, C.-A, Mohitosh, M, Smets, L, Maiti, M, Schepers, G, Mattelaer, H.-P, Rosemeyer, H, Herdewijn, P, Lescrinier, E.
登録日2021-01-05
公開日2021-01-27
最終更新日2024-01-31
実験手法SOLUTION NMR
主引用文献Stable Hairpin Structures Formed by Xylose-Based Nucleic Acids.
Chembiochem, 22, 2021
4ZMK
DownloadVisualize
BU of 4zmk by Molmil
Crystal structure of the dimerization domain of S. pombe Taz1
分子名称: Telomere length regulator taz1
著者Deng, W, Wu, J, Wang, F, Lei, M.
登録日2015-05-04
公開日2015-09-23
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Fission yeast telomere-binding protein Taz1 is a functional but not a structural counterpart of human TRF1 and TRF2.
Cell Res., 25, 2015
1R6G
DownloadVisualize
BU of 1r6g by Molmil
Crystal structure of the thyroid hormone receptor beta ligand binding domain in complex with a beta selective compound
分子名称: 2-[3,5-DIBROMO-4-(4-HYDROXY-3-{HYDROXY[(2-PHENYLETHYL)AMINO]METHYL}PHENOXY)PHENYL]ETHANE-1,1-DIOL, Thyroid hormone receptor beta-1
著者Hangeland, J.J, Dejneka, T, Friends, T.J, Devasthale, P, Mellstrom, K, Sandberg, J, Grynfarb, M, Doweyko, A.M, Sack, J.S, Einspahr, H, Farnegardh, M, Husman, B, Ljunggren, J, Koehler, K, Sheppard, C, Malm, J, Ryono, D.E.
登録日2003-10-15
公開日2005-02-15
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Thyroid receptor ligands. Part 2: Thyromimetics with improved selectivity for the thyroid hormone receptor beta.
Bioorg.Med.Chem.Lett., 14, 2004
5U7G
DownloadVisualize
BU of 5u7g by Molmil
Crystal Structure of the Catalytic Core of CBP
分子名称: CREB-binding protein, ZINC ION
著者Park, S, Stanfield, R.L, Martinez-Yamout, M.M, Dyson, H.J, Wilson, I.A, Wright, P.E.
登録日2016-12-12
公開日2017-06-21
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.401 Å)
主引用文献Role of the CBP catalytic core in intramolecular SUMOylation and control of histone H3 acetylation.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
8Q25
DownloadVisualize
BU of 8q25 by Molmil
Outward-facing, open1 proteoliposome complex I at 2.8 A, after deactivation treatment. Initially purified in LMNG.
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, ...
著者Grba, D.N, Hirst, J.
登録日2023-08-01
公開日2024-06-05
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Molecular mechanism of the ischemia-induced regulatory switch in mammalian complex I.
Science, 384, 2024
6Y2S
DownloadVisualize
BU of 6y2s by Molmil
Escherichia coli R318A RnlA endoribonuclease (single alanine mutant of RnlA)
分子名称: mRNA endoribonuclease toxin LS
著者Garcia-Rodriguez, G, Loris, R.
登録日2020-02-17
公開日2021-03-31
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.79 Å)
主引用文献Quaternary structure changes control ribonuclease activity of RnlA toxin.
To Be Published
8Q1U
DownloadVisualize
BU of 8q1u by Molmil
Inward-facing, open1 proteoliposome complex I at 3.3 A, after deactivation treatment. Initially purified in LMNG.
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, ...
著者Grba, D.N, Hirst, J.
登録日2023-08-01
公開日2024-06-05
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Molecular mechanism of the ischemia-induced regulatory switch in mammalian complex I.
Science, 384, 2024

224931

件を2024-09-11に公開中

PDB statisticsPDBj update infoContact PDBjnumon