PDB: 46006 件ウェブページステータス検索Chemie searchBIRD

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2DU6	Crystal structure of Archaeoglobus fulgidus O-phosphoseryl-tRNA synthetase E418N/E420N mutant complexed with tRNAAmber and O-phosphoserine ("amber complex") 分子名称: O-phosphoseryl-tRNA synthetase, PHOSPHOSERINE, tRNA 著者 Fukunaga, R. 登録日 2006-07-20 公開日 2007-03-13 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 Structural insights into the first step of RNA-dependent cysteine biosynthesis in archaea. Nat.Struct.Mol.Biol., 14, 2007
2DR5	Complex structure of CCA adding enzyme with mini-helix lacking CCA 分子名称: CCA-adding enzyme, SULFATE ION, tRNA (32-MER) 著者 Tomita, K, Ishitani, R, Fukai, S, Nureki, O. 登録日 2006-06-08 公開日 2006-10-31 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Complete crystallographic analysis of the dynamics of CCA sequence addition Nature, 443, 2006
2DRB	Complex structure of CCA-adding enzyme with tRNAminiCCA 分子名称: CCA-adding enzyme, SULFATE ION, tRNA (35-MER) 著者 Tomita, K, Ishitani, R, Fukai, S, Nureki, O. 登録日 2006-06-08 公開日 2006-11-14 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Complete crystallographic analysis of the dynamics of CCA sequence addition Nature, 443, 2006
2HYX	Structure of the C-terminal domain of DipZ from Mycobacterium tuberculosis 分子名称: Protein dipZ 著者 Goldstone, D, Baker, E.N, Metcalf, P, TB Structural Genomics Consortium (TBSGC) 登録日 2006-08-08 公開日 2007-07-17 最終更新日 2017-10-18 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structure of the C-terminal domain of DipZ from Mycobacterium tuberculosis To be Published
2I82	Crystal structure of pseudouridine synthase RluA: indirect sequence readout through protein-induced RNA structure 分子名称: (5S,6R)-5-FLUORO-6-HYDROXYDIHYDROPYRIMIDINE-2,4(1H,3H)-DIONE, 5'-R(*GP*AP*GP*GP*GP*GP*AP*UP*UP*GP*AP*AP*AP*AP*UP*CP*CP*CP*CP*UP*C)-3', Ribosomal large subunit pseudouridine synthase A 著者 Hoang, C. 登録日 2006-08-31 公開日 2006-11-21 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Crystal structure of pseudouridine synthase RluA: indirect sequence readout through protein-induced RNA structure Mol.Cell, 24, 2006
2D5R	Crystal Structure of a Tob-hCaf1 Complex 分子名称: CCR4-NOT transcription complex subunit 7, Tob1 protein 著者 Horiuchi, M, Suzuki, N.N, Muroya, N, Takahasi, K, Nishida, M, Yoshida, Y, Ikematsu, N, Nakamura, T, Kawamura-Tsuzuku, J, Yamamoto, T, Inagaki, F. 登録日 2005-11-04 公開日 2006-12-12 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural basis for the antiproliferative activity of the Tob-hCaf1 complex. J.Biol.Chem., 284, 2009
2D2K	Crystal Structure of a minimal, native (U39) all-RNA hairpin ribozyme 分子名称: 5'-R(*CP*GP*GP*UP*GP*AP*GP*AP*AP*GP*GP*G)-3', 5'-R(*GP*GP*CP*AP*GP*AP*GP*AP*AP*AP*CP*AP*CP*AP*CP*GP*A)-3', 5'-R(*UP*CP*CP*CP*(A2M)P*GP*UP*CP*CP*AP*CP*CP*G)-3', ... 著者 Alam, S, Grum-Tokars, V, Krucinska, J, Kundracik, M.L, Wedekind, J.E. 登録日 2005-09-11 公開日 2005-11-01 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 Conformational heterogeneity at position U37 of an all-RNA hairpin ribozyme with implications for metal binding and the catalytic structure of the S-turn Biochemistry, 44, 2005
2D2L	Crystal Structure of a minimal, all-RNA hairpin ribozyme with a propyl linker (C3) at position U39 分子名称: 5'-R(*CP*GP*GP*UP*GP*AP*GP*AP*AP*GP*GP*G)-3', 5'-R(*GP*GP*CP*AP*GP*AP*GP*AP*AP*AP*CP*AP*CP*AP*CP*GP*A)-3', 5'-R(*UP*CP*CP*CP*(A2M)P*GP*UP*CP*CP*AP*CP*CP*G)-3', ... 著者 Alam, S, Grum-Tokars, V, Krucinska, J, Kundracik, M.L, Wedekind, J.E. 登録日 2005-09-11 公開日 2005-11-01 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Conformational heterogeneity at position U37 of an all-RNA hairpin ribozyme with implications for metal binding and the catalytic structure of the S-turn Biochemistry, 44, 2005
2I4B	Crystal structure of Bicarbonate Transport Protein CmpA from Synechocystis sp. PCC 6803 in complex with bicarbonate and calcium 分子名称: BICARBONATE ION, Bicarbonate transporter, CALCIUM ION 著者 Koropatkin, N.M, Smith, T.J, Pakrasi, H.B. 登録日 2006-08-21 公開日 2006-12-19 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 The Structure of a Cyanobacterial Bicarbonate Transport Protein, CmpA. J.Biol.Chem., 282, 2007
2I7T	Structure of human CPSF-73 分子名称: Cleavage and polyadenylation specificity factor 73 kDa subunit, SULFATE ION, ZINC ION 著者 Mandel, C.R, Zhang, H, Tong, L. 登録日 2006-08-31 公開日 2007-01-30 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Polyadenylation factor CPSF-73 is the pre-mRNA 3'-end-processing endonuclease. Nature, 444, 2006
2I49	Crystal structure of apo form of Bicarbonate Transport Protein CmpA from Synechocystis sp. PCC 6803 分子名称: Bicarbonate transporter 著者 Koropatkin, N.M, Smith, T.J, Pakrasi, H.B. 登録日 2006-08-21 公開日 2006-12-19 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 The Structure of a Cyanobacterial Bicarbonate Transport Protein, CmpA. J.Biol.Chem., 282, 2007
2I7V	Structure of Human CPSF-73 分子名称: Cleavage and polyadenylation specificity factor 73 kDa subunit, SULFATE ION, ZINC ION 著者 Mandel, C.R, Zhang, H, Tong, L. 登録日 2006-08-31 公開日 2007-01-30 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Polyadenylation factor CPSF-73 is the pre-mRNA 3'-end-processing endonuclease. Nature, 444, 2006
2I48	Crystal structure of Bicarbonate Transport Protein CmpA from Synechocystis sp. PCC 6803 in complex with carbonic acid 分子名称: Bicarbonate transporter, CARBONATE ION 著者 Koropatkin, N.M, Smith, T.J, Pakrasi, H.B. 登録日 2006-08-21 公開日 2006-12-19 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 The Structure of a Cyanobacterial Bicarbonate Transport Protein, CmpA. J.Biol.Chem., 282, 2007
2HZ9	Crystal structure of Lys12Val/Asn95Val/Cys117Val mutant of human acidic fibroblast growth factor at 1.70 angstrom resolution. 分子名称: FORMIC ACID, Heparin-binding growth factor 1, SULFATE ION 著者 Dubey, V.K, Lee, J, Somasundaram, T, Blaber, M. 登録日 2006-08-08 公開日 2007-06-19 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Spackling the Crack: Stabilizing Human Fibroblast Growth Factor-1 by Targeting the N and C terminus beta-Strand Interactions J.Mol.Biol., 371, 2007
2I7X	Structure of Yeast CPSF-100 (Ydh1p) 分子名称: Protein CFT2 著者 Mandel, C.R, Zhang, H, Gebauer, D, Tong, L. 登録日 2006-08-31 公開日 2007-01-30 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Polyadenylation factor CPSF-73 is the pre-mRNA 3'-end-processing endonuclease. Nature, 444, 2006
2NYZ	Viral Chemokine Binding Protein M3 From Murine Gammaherpesvirus68 In Complex With The C- Chemokine XCL1 分子名称: Hypothetical protein GAMMAHV.M3, Lymphotactin 著者 Alexander-Brett, J.M, Fremont, D.H. 登録日 2006-11-21 公開日 2007-12-25 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Dual GPCR and GAG mimicry by the M3 chemokine decoy receptor. J.Exp.Med., 204, 2007
2I4C	Crystal structure of Bicarbonate Transport Protein CmpA from Synechocystis sp. PCC 6803 in complex with bicarbonate and calcium 分子名称: BICARBONATE ION, Bicarbonate transporter, CALCIUM ION 著者 Koropatkin, N.M, Smith, T.J, Pakrasi, H.B. 登録日 2006-08-21 公開日 2006-12-19 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 The Structure of a Cyanobacterial Bicarbonate Transport Protein, CmpA. J.Biol.Chem., 282, 2007
2YFE	Ligand binding domain of human PPAR gamma in complex with amorfrutin 1 分子名称: Amorfrutin 1, PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA 著者 de Groot, J.C, Buessow, K. 登録日 2011-04-05 公開日 2012-04-11 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Amorfrutins are Potent Antidiabetic Dietary Natural Products Proc.Natl.Acad.Sci.USA, 109, 2012
6QX9	Structure of a human fully-assembled precatalytic spliceosome (pre-B complex). 分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, AdML pre-mRNA, GUANOSINE-5'-TRIPHOSPHATE, ... 著者 Charenton, C, Wilkinson, M.E, Nagai, K. 登録日 2019-03-07 公開日 2019-04-17 最終更新日 2020-10-07 実験手法 ELECTRON MICROSCOPY (3.28 Å) 主引用文献 Mechanism of 5' splice site transfer for human spliceosome activation. Science, 364, 2019
6KDH	Antibody 64M-5 Fab including isoAsp in ligand-free form 分子名称: Anti-(6-4) photoproduct antibody 64M-5 Fab (heavy chain), Anti-(6-4) photoproduct antibody 64M-5 Fab (light chain) 著者 Yokoyama, H, Mizutani, R, Noguchi, S, Hayashida, N. 登録日 2019-07-02 公開日 2019-12-18 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.47 Å) 主引用文献 Structural and biochemical basis of the formation of isoaspartate in the complementarity-determining region of antibody 64M-5 Fab. Sci Rep, 9, 2019
7ZR5	CryoEM structure of HSP90-CDC37-BRAF(V600E)-PP5(closed) complex 分子名称: ADENOSINE-5'-TRIPHOSPHATE, Heat shock protein HSP 90-beta, Hsp90 co-chaperone Cdc37, ... 著者 Oberoi, J, Pearl, L.H. 登録日 2022-05-03 公開日 2022-12-14 最終更新日 2022-12-21 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 HSP90-CDC37-PP5 forms a structural platform for kinase dephosphorylation. Nat Commun, 13, 2022
7ZR6	CryoEM structure of HSP90-CDC37-BRAF(V600E)-PP5(open) complex 分子名称: ADENOSINE-5'-TRIPHOSPHATE, Heat shock protein HSP 90-beta, Hsp90 co-chaperone Cdc37, ... 著者 Oberoi, J, Pearl, L.H. 登録日 2022-05-03 公開日 2022-12-28 実験手法 ELECTRON MICROSCOPY (4.2 Å) 主引用文献 HSP90-CDC37-PP5 forms a structural platform for kinase dephosphorylation. Nat Commun, 13, 2022
6ULH	Structure of MavC in complex with its substrate in R3 spacegroup 分子名称: LPG2147 (MavC), Ubiquitin, Ubiquitin-conjugating enzyme E2 N 著者 Iyer, S, Puvar, K, Das, C. 登録日 2019-10-08 公開日 2020-05-27 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.968 Å) 主引用文献 Legionella effector MavC targets the Ube2N~Ub conjugate for noncanonical ubiquitination. Nat Commun, 11, 2020
6UMS	Crystal structure of MavC in complex with its substrate mimic in C222(1) space group 分子名称: MavC, Ubiquitin, Ubiquitin-conjugating enzyme E2 N 著者 Iyer, S, Puvar, K, Das, C. 登録日 2019-10-10 公開日 2020-05-27 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.344 Å) 主引用文献 Legionella effector MavC targets the Ube2N~Ub conjugate for noncanonical ubiquitination. Nat Commun, 11, 2020
2YJD	Stapled peptide bound to Estrogen Receptor Beta 分子名称: 4-(2-PROPAN-2-YLOXYBENZIMIDAZOL-1-YL)PHENOL, ESTROGEN RECEPTOR BETA, STAPLED PEPTIDE 著者 Phillips, C, Roberts, L.R, Schade, M, Bent, A, Davies, N.L, Moore, R, Pannifer, A.D, Brown, D.G, Pickford, A.R, Irving, S.L. 登録日 2011-05-19 公開日 2011-08-03 最終更新日 2017-01-25 実験手法 X-RAY DIFFRACTION (1.93 Å) 主引用文献 Design and Structure of Stapled Peptides Binding to Estrogen Receptors. J.Am.Chem.Soc., 133, 2011

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